RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 TRPC7Q9HCX4 862 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 DNAAF2Q9NVR5 837 aaKnown RBP7.87□□□□□ -1.15
SOX6-211ENST00000528429 SMPD4Q9NXE4 827 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 UBP1Q9NZI7 540 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 TRPM5Q9NZQ8 1165 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 DNMT3LQ9UJW3 386 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 GOLGA6L7A0A1B0GV03 622 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 LCHNA4D1U4 455 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 ZNF840PA6NDX5 716 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 ZBTB24O43167 697 aaPredicted RBP7.87□□□□□ -1.15
SOX6-211ENST00000528429 CNTN5O94779 1100 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 KIAA0754O94854 1291 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 INMTO95050 263 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 ATP2A2P16615 1042 aaKnown RBP7.87□□□□□ -1.15
SOX6-211ENST00000528429 HMGA1P17096 107 aaKnown RBP7.87□□□□□ -1.15
SOX6-211ENST00000528429 PHBP35232 272 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 FDFT1P37268 417 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 SESN2P58004 480 aaPredicted RBP7.87□□□□□ -1.15
SOX6-211ENST00000528429 PPP2R2AP63151 447 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 GNGT1P63211 74 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 COX10Q12887 443 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 SEMA5AQ13591 1074 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 RAB33AQ14088 237 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 ALFQ53S48 1182 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 MANEALQ5VSG8 457 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 FBXL22Q6P050 247 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 RFWD3Q6PCD5 774 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 CROCCP2Q86T23 111 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 CAND1Q86VP6 1230 aaKnown RBP7.87□□□□□ -1.15
SOX6-211ENST00000528429 AGGF1Q8N302 714 aaeCLIP7.87□□□□□ -1.15
SOX6-211ENST00000528429 PAF1Q8N7H5 531 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 C7orf57Q8NEG2 295 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 MDM1Q8TC05 714 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 ARHGEF2Q92974 986 aaKnown RBP7.87□□□□□ -1.15
SOX6-211ENST00000528429 TTLL2Q9BWV7 592 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 SLC39A8Q9C0K1 460 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 STMN4Q9H169 189 aaPredicted RBP7.87□□□□□ -1.15
SOX6-211ENST00000528429 ALG13Q9NP73 1137 aaKnown RBP7.87□□□□□ -1.15
SOX6-211ENST00000528429 GKN1Q9NS71 199 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 ZC3H7BQ9UGR2 993 aaKnown RBP7.87□□□□□ -1.15
SOX6-211ENST00000528429 INSL5Q9Y5Q6 135 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 PATJQ8NI35 1801 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 C2orf78A6NCI8 922 aa7.86□□□□□ -1.15
SOX6-211ENST00000528429 ANKRD65E5RJM6 399 aa7.86□□□□□ -1.15
SOX6-211ENST00000528429 E7ESA3 106 aa7.86□□□□□ -1.15
SOX6-211ENST00000528429 TRDMT1O14717 391 aaKnown RBP7.86□□□□□ -1.15
SOX6-211ENST00000528429 EIF3HO15372 352 aaKnown RBP eCLIP7.86□□□□□ -1.15
SOX6-211ENST00000528429 COCHO43405 550 aa7.86□□□□□ -1.15
SOX6-211ENST00000528429 TLL1O43897 1013 aa7.86□□□□□ -1.15
SOX6-211ENST00000528429 CDH16O75309 829 aa7.86□□□□□ -1.15
SOX6-211ENST00000528429 AGTP01019 485 aa7.86□□□□□ -1.15
SOX6-211ENST00000528429 ABHD2P08910 425 aa7.86□□□□□ -1.15
SOX6-211ENST00000528429 CNPP09543 421 aaKnown RBP7.86□□□□□ -1.15
SOX6-211ENST00000528429 ZDHHC11BP0C7U3 371 aa7.86□□□□□ -1.15
SOX6-211ENST00000528429 NFKB1P19838 968 aa7.86□□□□□ -1.15
SOX6-211ENST00000528429 COG7P83436 770 aa7.86□□□□□ -1.15
SOX6-211ENST00000528429 LBRQ14739 615 aaKnown RBP7.86□□□□□ -1.15
SOX6-211ENST00000528429 CLPPQ16740 277 aaPredicted RBP7.86□□□□□ -1.15
SOX6-211ENST00000528429 HECTD3Q5T447 861 aa7.86□□□□□ -1.15
SOX6-211ENST00000528429 KDM7AQ6ZMT4 941 aa7.86□□□□□ -1.15
SOX6-211ENST00000528429 DNAJB7Q7Z6W7 309 aaPredicted RBP7.86□□□□□ -1.15
SOX6-211ENST00000528429 ARHGAP12Q8IWW6 846 aa7.86□□□□□ -1.15
SOX6-211ENST00000528429 SRRM1Q8IYB3 904 aaKnown RBP7.86□□□□□ -1.15
SOX6-211ENST00000528429 CFAP52Q8N1V2 620 aa7.86□□□□□ -1.15
SOX6-211ENST00000528429 MPP5Q8N3R9 675 aa7.86□□□□□ -1.15
SOX6-211ENST00000528429 ARFGAP2Q8N6H7 521 aa7.86□□□□□ -1.15
SOX6-211ENST00000528429 RTL3Q8N8U3 475 aaKnown RBP7.86□□□□□ -1.15
SOX6-211ENST00000528429 PDZD8Q8NEN9 1154 aa7.86□□□□□ -1.15
SOX6-211ENST00000528429 FRS2Q8WU20 508 aa7.86□□□□□ -1.15
SOX6-211ENST00000528429 IGSF8Q969P0 613 aa7.86□□□□□ -1.15
SOX6-211ENST00000528429 TLCD1Q96CP7 247 aa7.86□□□□□ -1.15
SOX6-211ENST00000528429 APOL2Q9BQE5 337 aa7.86□□□□□ -1.15
SOX6-211ENST00000528429 TMEM109Q9BVC6 243 aa7.86□□□□□ -1.15
SOX6-211ENST00000528429 ZYG11BQ9C0D3 744 aa7.86□□□□□ -1.15
SOX6-211ENST00000528429 EVLQ9UI08 416 aaPredicted RBP7.86□□□□□ -1.15
SOX6-211ENST00000528429 TMA7Q9Y2S6 64 aaKnown RBP7.86□□□□□ -1.15
SOX6-211ENST00000528429 INSL6Q9Y581 213 aa7.86□□□□□ -1.15
SOX6-211ENST00000528429 TEX264Q9Y6I9 313 aa7.86□□□□□ -1.15
SOX6-211ENST00000528429 SLC4A7Q9Y6M7 1214 aa7.86□□□□□ -1.15
SOX6-211ENST00000528429 ARHGAP42A6NI28 874 aa7.86□□□□□ -1.15
SOX6-211ENST00000528429 CEP290O15078 2479 aa7.86□□□□□ -1.15
SOX6-211ENST00000528429 MTSS1O43312 755 aa7.86□□□□□ -1.15
SOX6-211ENST00000528429 CXCL14O95715 111 aa7.86□□□□□ -1.15
SOX6-211ENST00000528429 CREB1P16220 341 aa7.86□□□□□ -1.15
SOX6-211ENST00000528429 KRT15P19012 456 aa7.86□□□□□ -1.15
SOX6-211ENST00000528429 TPSB2P20231 275 aa7.86□□□□□ -1.15
SOX6-211ENST00000528429 CTNNB1P35222 781 aa7.86□□□□□ -1.15
SOX6-211ENST00000528429 HARS2P49590 506 aaKnown RBP7.86□□□□□ -1.15
SOX6-211ENST00000528429 PAPOLAP51003 745 aaKnown RBP7.86□□□□□ -1.15
SOX6-211ENST00000528429 EPHB3P54753 998 aa7.86□□□□□ -1.15
SOX6-211ENST00000528429 BPIFB3P59826 476 aa7.86□□□□□ -1.15
SOX6-211ENST00000528429 TPSAB1Q15661 275 aa7.86□□□□□ -1.15
SOX6-211ENST00000528429 PARP6Q2NL67 630 aa7.86□□□□□ -1.15
SOX6-211ENST00000528429 TMEM240Q5SV17 173 aa7.86□□□□□ -1.15
SOX6-211ENST00000528429 DENND1CQ8IV53 801 aa7.86□□□□□ -1.15
SOX6-211ENST00000528429 CTAGE3PQ8IX95 158 aa7.86□□□□□ -1.15
SOX6-211ENST00000528429 LGI2Q8N0V4 545 aa7.86□□□□□ -1.15
SOX6-211ENST00000528429 CYP4X1Q8N118 509 aa7.86□□□□□ -1.15
SOX6-211ENST00000528429 SUN5Q8TC36 379 aa7.86□□□□□ -1.15
SOX6-211ENST00000528429 MYEOVQ96EZ4 313 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms