RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 RYBPQ8N488 228 aaPredicted RBP13.68□□□□□ -0.22
CAPN1-215ENST00000528396 CADM4Q8NFZ8 388 aa13.68□□□□□ -0.22
CAPN1-215ENST00000528396 SNX19Q92543 992 aa13.68□□□□□ -0.22
CAPN1-215ENST00000528396 HSPH1Q92598 858 aa13.68□□□□□ -0.22
CAPN1-215ENST00000528396 PTPRN2Q92932 1015 aa13.68□□□□□ -0.22
CAPN1-215ENST00000528396 ARHGEF26Q96DR7 871 aa13.68□□□□□ -0.22
CAPN1-215ENST00000528396 MRFAP1L1Q96HT8 127 aa13.68□□□□□ -0.22
CAPN1-215ENST00000528396 CHP1Q99653 195 aa13.68□□□□□ -0.22
CAPN1-215ENST00000528396 SMOC1Q9H4F8 434 aa13.68□□□□□ -0.22
CAPN1-215ENST00000528396 SGK2Q9HBY8 427 aa13.68□□□□□ -0.22
CAPN1-215ENST00000528396 SPTLC3Q9NUV7 552 aa13.68□□□□□ -0.22
CAPN1-215ENST00000528396 ZNF212Q9UDV6 495 aa13.68□□□□□ -0.22
CAPN1-215ENST00000528396 SUSD2Q9UGT4 822 aa13.68□□□□□ -0.22
CAPN1-215ENST00000528396 CDV3Q9UKY7 258 aaKnown RBP13.68□□□□□ -0.22
CAPN1-215ENST00000528396 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.68□□□□□ -0.22
CAPN1-215ENST00000528396 ATXN2Q99700 1313 aaKnown RBP13.67□□□□□ -0.22
CAPN1-215ENST00000528396 PLXND1Q9Y4D7 1925 aa13.67□□□□□ -0.22
CAPN1-215ENST00000528396 A0A1W2PP55 124 aa13.67□□□□□ -0.22
CAPN1-215ENST00000528396 ZSCAN5CA6NGD5 496 aaPredicted RBP13.67□□□□□ -0.22
CAPN1-215ENST00000528396 FAM47DPA6NHR8 397 aa13.67□□□□□ -0.22
CAPN1-215ENST00000528396 LRRC72A6NJI9 287 aa13.67□□□□□ -0.22
CAPN1-215ENST00000528396 H3BRJ5 948 aa13.67□□□□□ -0.22
CAPN1-215ENST00000528396 K7ERQ8 282 aa13.67□□□□□ -0.22
CAPN1-215ENST00000528396 ALOX15BO15296 676 aa13.67□□□□□ -0.22
CAPN1-215ENST00000528396 BUB1O43683 1085 aa13.67□□□□□ -0.22
CAPN1-215ENST00000528396 SEMA4FO95754 770 aa13.67□□□□□ -0.22
CAPN1-215ENST00000528396 IGLV3-19P01714 112 aa13.67□□□□□ -0.22
CAPN1-215ENST00000528396 GNSP15586 552 aa13.67□□□□□ -0.22
CAPN1-215ENST00000528396 C5AR1P21730 350 aa13.67□□□□□ -0.22
CAPN1-215ENST00000528396 GLDCP23378 1020 aa13.67□□□□□ -0.22
CAPN1-215ENST00000528396 HOXD12P35452 270 aa13.67□□□□□ -0.22
CAPN1-215ENST00000528396 SERPINH1P50454 418 aaKnown RBP13.67□□□□□ -0.22
CAPN1-215ENST00000528396 YBEYP58557 167 aaPredicted RBP13.67□□□□□ -0.22
CAPN1-215ENST00000528396 TBX2Q13207 712 aaPredicted RBP13.67□□□□□ -0.22
CAPN1-215ENST00000528396 KRT81Q14533 505 aa13.67□□□□□ -0.22
CAPN1-215ENST00000528396 SMTNL2Q2TAL5 461 aa13.67□□□□□ -0.22
CAPN1-215ENST00000528396 PARP15Q460N3 678 aa13.67□□□□□ -0.22
CAPN1-215ENST00000528396 ZFYVE27Q5T4F4 411 aa13.67□□□□□ -0.22
CAPN1-215ENST00000528396 DAB2IPQ5VWQ8 1189 aa13.67□□□□□ -0.22
CAPN1-215ENST00000528396 C22orf39Q6P5X5 142 aa13.67□□□□□ -0.22
CAPN1-215ENST00000528396 RFX8Q6ZV50 586 aa13.67□□□□□ -0.22
CAPN1-215ENST00000528396 HDDC3Q8N4P3 179 aa13.67□□□□□ -0.22
CAPN1-215ENST00000528396 CEP76Q8TAP6 659 aa13.67□□□□□ -0.22
CAPN1-215ENST00000528396 FRS2Q8WU20 508 aa13.67□□□□□ -0.22
CAPN1-215ENST00000528396 ARHGEF2Q92974 986 aaKnown RBP13.67□□□□□ -0.22
CAPN1-215ENST00000528396 BTBD6Q96KE9 485 aa13.67□□□□□ -0.22
CAPN1-215ENST00000528396 PEBP4Q96S96 227 aa13.67□□□□□ -0.22
CAPN1-215ENST00000528396 KCTD15Q96SI1 283 aaPredicted RBP13.67□□□□□ -0.22
CAPN1-215ENST00000528396 FAM129BQ96TA1 746 aa13.67□□□□□ -0.22
CAPN1-215ENST00000528396 NUSAP1Q9BXS6 441 aaKnown RBP13.67□□□□□ -0.22
CAPN1-215ENST00000528396 PACSIN1Q9BY11 444 aa13.67□□□□□ -0.22
CAPN1-215ENST00000528396 CEP44Q9C0F1 390 aa13.67□□□□□ -0.22
CAPN1-215ENST00000528396 MIR1-1HGQ9H1L0 117 aa13.67□□□□□ -0.22
CAPN1-215ENST00000528396 TNKS2Q9H2K2 1166 aa13.67□□□□□ -0.22
CAPN1-215ENST00000528396 LUC7LQ9NQ29 371 aaKnown RBP13.67□□□□□ -0.22
CAPN1-215ENST00000528396 DYRK4Q9NR20 520 aa13.67□□□□□ -0.22
CAPN1-215ENST00000528396 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.67□□□□□ -0.22
CAPN1-215ENST00000528396 NDFIP2Q9NV92 336 aa13.67□□□□□ -0.22
CAPN1-215ENST00000528396 DOCK4Q8N1I0 1966 aa13.67□□□□□ -0.22
CAPN1-215ENST00000528396 CFAP54Q96N23 3096 aa13.66□□□□□ -0.22
CAPN1-215ENST00000528396 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.66□□□□□ -0.22
CAPN1-215ENST00000528396 TMEM110-MUSTN1A8MSY1 372 aa13.66□□□□□ -0.22
CAPN1-215ENST00000528396 GOLGA6L6A8MZA4 724 aa13.66□□□□□ -0.22
CAPN1-215ENST00000528396 RASA4BC9J798 803 aa13.66□□□□□ -0.22
CAPN1-215ENST00000528396 MCF2LO15068 1137 aa13.66□□□□□ -0.22
CAPN1-215ENST00000528396 RASA4O43374 803 aa13.66□□□□□ -0.22
CAPN1-215ENST00000528396 SMAD6O43541 496 aaKnown RBP13.66□□□□□ -0.22
CAPN1-215ENST00000528396 FSBPO95073 299 aa13.66□□□□□ -0.22
CAPN1-215ENST00000528396 IPO7O95373 1038 aaKnown RBP13.66□□□□□ -0.22
CAPN1-215ENST00000528396 PRNPP04156 253 aa13.66□□□□□ -0.22
CAPN1-215ENST00000528396 TMEM253P0C7T8 217 aa13.66□□□□□ -0.22
CAPN1-215ENST00000528396 GOT1P17174 413 aa13.66□□□□□ -0.22
CAPN1-215ENST00000528396 GJC1P36383 396 aa13.66□□□□□ -0.22
CAPN1-215ENST00000528396 CCDC15Q0P6D6 951 aa13.66□□□□□ -0.22
CAPN1-215ENST00000528396 SEMA3BQ13214 749 aa13.66□□□□□ -0.22
CAPN1-215ENST00000528396 SPA17Q15506 151 aa13.66□□□□□ -0.22
CAPN1-215ENST00000528396 CA9Q16790 459 aa13.66□□□□□ -0.22
CAPN1-215ENST00000528396 ASTE1Q2TB18 679 aaPredicted RBP13.66□□□□□ -0.22
CAPN1-215ENST00000528396 TRIM61Q5EBN2 209 aa13.66□□□□□ -0.22
CAPN1-215ENST00000528396 KCNT1Q5JUK3 1230 aa13.66□□□□□ -0.22
CAPN1-215ENST00000528396 PLA2G2CQ5R387 149 aa13.66□□□□□ -0.22
CAPN1-215ENST00000528396 TCEAL6Q6IPX3 200 aa13.66□□□□□ -0.22
CAPN1-215ENST00000528396 GAS2L3Q86XJ1 694 aa13.66□□□□□ -0.22
CAPN1-215ENST00000528396 SLC41A1Q8IVJ1 513 aa13.66□□□□□ -0.22
CAPN1-215ENST00000528396 ARFGAP1Q8N6T3 406 aa13.66□□□□□ -0.22
CAPN1-215ENST00000528396 PCDH20Q8N6Y1 951 aaKnown RBP13.66□□□□□ -0.22
CAPN1-215ENST00000528396 NIPA2Q8N8Q9 360 aa13.66□□□□□ -0.22
CAPN1-215ENST00000528396 GRIN3AQ8TCU5 1115 aa13.66□□□□□ -0.22
CAPN1-215ENST00000528396 TCEAL3Q969E4 200 aa13.66□□□□□ -0.22
CAPN1-215ENST00000528396 ZNF419Q96HQ0 510 aaPredicted RBP13.66□□□□□ -0.22
CAPN1-215ENST00000528396 ACE2Q9BYF1 805 aaPredicted RBP13.66□□□□□ -0.22
CAPN1-215ENST00000528396 PCED1AQ9H1Q7 454 aa13.66□□□□□ -0.22
CAPN1-215ENST00000528396 FZD4Q9ULV1 537 aa13.66□□□□□ -0.22
CAPN1-215ENST00000528396 NEU3Q9UQ49 428 aa13.66□□□□□ -0.22
CAPN1-215ENST00000528396 CXorf51AA0A1B0GTR3 108 aa13.65□□□□□ -0.22
CAPN1-215ENST00000528396 ARHGAP42A6NI28 874 aa13.65□□□□□ -0.22
CAPN1-215ENST00000528396 WASH4PA8MWX3 477 aa13.65□□□□□ -0.22
CAPN1-215ENST00000528396 KPNA3O00505 521 aaPredicted RBP13.65□□□□□ -0.22
CAPN1-215ENST00000528396 KDELR3O43731 214 aa13.65□□□□□ -0.22
CAPN1-215ENST00000528396 ZMPSTE24O75844 475 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms