RNA–Protein interactions for RNA: ENST00000528302.5

SF3B2-206, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5 BASIC

Gene SF3B2, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-206ENST00000528302 KCTD21Q4G0X4 260 aa10.04□□□□□ -0.8
SF3B2-206ENST00000528302 KRT80Q6KB66 452 aa10.04□□□□□ -0.8
SF3B2-206ENST00000528302 OTOP3Q7RTS5 596 aa10.04□□□□□ -0.8
SF3B2-206ENST00000528302 IFNEQ86WN2 208 aa10.04□□□□□ -0.8
SF3B2-206ENST00000528302 RYBPQ8N488 228 aaPredicted RBP10.04□□□□□ -0.8
SF3B2-206ENST00000528302 SPATA22Q8NHS9 363 aa10.04□□□□□ -0.8
SF3B2-206ENST00000528302 LENG1Q96BZ8 264 aaPredicted RBP10.04□□□□□ -0.8
SF3B2-206ENST00000528302 DGCR14Q96DF8 476 aaKnown RBP10.04□□□□□ -0.8
SF3B2-206ENST00000528302 ACE2Q9BYF1 805 aaPredicted RBP10.04□□□□□ -0.8
SF3B2-206ENST00000528302 ATXN10Q9UBB4 475 aa10.04□□□□□ -0.8
SF3B2-206ENST00000528302 GIMAP2Q9UG22 337 aa10.04□□□□□ -0.8
SF3B2-206ENST00000528302 PSMD13Q9UNM6 376 aa10.04□□□□□ -0.8
SF3B2-206ENST00000528302 C9IYK1 514 aa10.04□□□□□ -0.8
SF3B2-206ENST00000528302 COQ9O75208 318 aa10.04□□□□□ -0.8
SF3B2-206ENST00000528302 GCATO75600 419 aa10.04□□□□□ -0.8
SF3B2-206ENST00000528302 JCHAINP01591 159 aa10.04□□□□□ -0.8
SF3B2-206ENST00000528302 GJA9P57773 515 aa10.04□□□□□ -0.8
SF3B2-206ENST00000528302 PDAP1Q13442 181 aaKnown RBP10.04□□□□□ -0.8
SF3B2-206ENST00000528302 SNAPC2Q13487 334 aa10.04□□□□□ -0.8
SF3B2-206ENST00000528302 GEN1Q17RS7 908 aa10.04□□□□□ -0.8
SF3B2-206ENST00000528302 ITPRIPL1Q6GPH6 555 aa10.04□□□□□ -0.8
SF3B2-206ENST00000528302 NT5DC4Q86YG4 428 aa10.04□□□□□ -0.8
SF3B2-206ENST00000528302 SLC7A14Q8TBB6 771 aa10.04□□□□□ -0.8
SF3B2-206ENST00000528302 EMID1Q96A84 441 aaPredicted RBP10.04□□□□□ -0.8
SF3B2-206ENST00000528302 TSNARE1Q96NA8 513 aa10.04□□□□□ -0.8
SF3B2-206ENST00000528302 FERMT1Q9BQL6 677 aa10.04□□□□□ -0.8
SF3B2-206ENST00000528302 ZNF670Q9BS34 389 aa10.04□□□□□ -0.8
SF3B2-206ENST00000528302 PDZD7Q9H5P4 517 aa10.04□□□□□ -0.8
SF3B2-206ENST00000528302 COQ10BQ9H8M1 238 aa10.04□□□□□ -0.8
SF3B2-206ENST00000528302 PLOD2O00469 737 aa10.03□□□□□ -0.8
SF3B2-206ENST00000528302 HOXA2O43364 376 aa10.03□□□□□ -0.8
SF3B2-206ENST00000528302 TIPRLO75663 272 aa10.03□□□□□ -0.8
SF3B2-206ENST00000528302 BEST1O76090 585 aa10.03□□□□□ -0.8
SF3B2-206ENST00000528302 GRK2P25098 689 aa10.03□□□□□ -0.8
SF3B2-206ENST00000528302 RPL5P46777 297 aaKnown RBP10.03□□□□□ -0.8
SF3B2-206ENST00000528302 NIPAL4Q0D2K0 466 aa10.03□□□□□ -0.8
SF3B2-206ENST00000528302 PTK2BQ14289 1009 aa10.03□□□□□ -0.8
SF3B2-206ENST00000528302 LRRC8EQ6NSJ5 796 aa10.03□□□□□ -0.8
SF3B2-206ENST00000528302 TRIM67Q6ZTA4 783 aa10.03□□□□□ -0.8
SF3B2-206ENST00000528302 CHST15Q7LFX5 561 aaPredicted RBP10.03□□□□□ -0.8
SF3B2-206ENST00000528302 KCNMB4Q86W47 210 aa10.03□□□□□ -0.8
SF3B2-206ENST00000528302 APLFQ8IW19 511 aaPredicted RBP10.03□□□□□ -0.8
SF3B2-206ENST00000528302 NAT16Q8N8M0 369 aa10.03□□□□□ -0.8
SF3B2-206ENST00000528302 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.03□□□□□ -0.81e-6■■■□□ 15.3
SF3B2-206ENST00000528302 RNF139Q8WU17 664 aa10.03□□□□□ -0.8
SF3B2-206ENST00000528302 VPS39Q96JC1 886 aa10.03□□□□□ -0.8
SF3B2-206ENST00000528302 FAM210AQ96ND0 272 aa10.03□□□□□ -0.8
SF3B2-206ENST00000528302 TMEM79Q9BSE2 394 aa10.03□□□□□ -0.8
SF3B2-206ENST00000528302 MED10Q9BTT4 135 aa10.03□□□□□ -0.8
SF3B2-206ENST00000528302 EIF2AQ9BY44 585 aaKnown RBP10.03□□□□□ -0.8
SF3B2-206ENST00000528302 FZD8Q9H461 694 aa10.03□□□□□ -0.8
SF3B2-206ENST00000528302 NOL11Q9H8H0 719 aaKnown RBP10.03□□□□□ -0.8
SF3B2-206ENST00000528302 TRPC7Q9HCX4 862 aa10.03□□□□□ -0.8
SF3B2-206ENST00000528302 BFARQ9NZS9 450 aa10.03□□□□□ -0.8
SF3B2-206ENST00000528302 CSADQ9Y600 493 aa10.03□□□□□ -0.8
SF3B2-206ENST00000528302 G3V2L1 256 aa10.03□□□□□ -0.8
SF3B2-206ENST00000528302 PDLIM1O00151 329 aa10.03□□□□□ -0.8
SF3B2-206ENST00000528302 NRP1O14786 923 aa10.03□□□□□ -0.8
SF3B2-206ENST00000528302 FBXO21O94952 628 aa10.03□□□□□ -0.8
SF3B2-206ENST00000528302 MT-CYBP00156 380 aaPredicted RBP10.03□□□□□ -0.8
SF3B2-206ENST00000528302 SPRP35270 261 aaPredicted RBP10.03□□□□□ -0.8
SF3B2-206ENST00000528302 GHRHRQ02643 423 aa10.03□□□□□ -0.8
SF3B2-206ENST00000528302 SEMA5AQ13591 1074 aa10.03□□□□□ -0.8
SF3B2-206ENST00000528302 PRPSAP1Q14558 356 aa10.03□□□□□ -0.8
SF3B2-206ENST00000528302 PCSK7Q16549 785 aa10.03□□□□□ -0.8
SF3B2-206ENST00000528302 NOMO2Q5JPE7 1267 aa10.03□□□□□ -0.8
SF3B2-206ENST00000528302 MAP3K21Q5TCX8 1036 aa10.03□□□□□ -0.8
SF3B2-206ENST00000528302 ARHGAP17Q68EM7 881 aa10.03□□□□□ -0.8
SF3B2-206ENST00000528302 RWDD4Q6NW29 188 aaKnown RBP10.03□□□□□ -0.8
SF3B2-206ENST00000528302 EPGNQ6UW88 154 aa10.03□□□□□ -0.8
SF3B2-206ENST00000528302 B3GNT6Q6ZMB0 384 aa10.03□□□□□ -0.8
SF3B2-206ENST00000528302 LDB1Q86U70 411 aaPredicted RBP10.03□□□□□ -0.8
SF3B2-206ENST00000528302 IPMKQ8NFU5 416 aa10.03□□□□□ -0.8
SF3B2-206ENST00000528302 MIPOL1Q8TD10 442 aa10.03□□□□□ -0.8
SF3B2-206ENST00000528302 RNF34Q969K3 372 aa10.03□□□□□ -0.8
SF3B2-206ENST00000528302 NXNL1Q96CM4 212 aa10.03□□□□□ -0.8
SF3B2-206ENST00000528302 LRRC39Q96DD0 335 aa10.03□□□□□ -0.8
SF3B2-206ENST00000528302 PRICKLE1Q96MT3 831 aaPredicted RBP10.03□□□□□ -0.8
SF3B2-206ENST00000528302 QKIQ96PU8 341 aaKnown RBP eCLIP10.03□□□□□ -0.86e-6■■■■□ 20.5
SF3B2-206ENST00000528302 C2orf40Q9H1Z8 148 aa10.03□□□□□ -0.8
SF3B2-206ENST00000528302 SPON1Q9HCB6 807 aa10.03□□□□□ -0.8
SF3B2-206ENST00000528302 HSFX1Q9UBD0 423 aa10.03□□□□□ -0.8
SF3B2-206ENST00000528302 XPR1Q9UBH6 696 aa10.03□□□□□ -0.8
SF3B2-206ENST00000528302 NUDT5Q9UKK9 219 aa10.03□□□□□ -0.8
SF3B2-206ENST00000528302 MTF2Q9Y483 593 aaPredicted RBP10.03□□□□□ -0.8
SF3B2-206ENST00000528302 PCDHB12Q9Y5F1 795 aa10.03□□□□□ -0.8
SF3B2-206ENST00000528302 ZNF839A8K0R7 811 aa10.02□□□□□ -0.8
SF3B2-206ENST00000528302 EEF2KO00418 725 aaKnown RBP10.02□□□□□ -0.8
SF3B2-206ENST00000528302 VAPBO95292 243 aa10.02□□□□□ -0.8
SF3B2-206ENST00000528302 FAM58BPP0C7Q3 252 aa10.02□□□□□ -0.8
SF3B2-206ENST00000528302 THRAP10827 490 aa10.02□□□□□ -0.8
SF3B2-206ENST00000528302 ABCD1P33897 745 aa10.02□□□□□ -0.8
SF3B2-206ENST00000528302 PLOD1Q02809 727 aaPredicted RBP10.02□□□□□ -0.8
SF3B2-206ENST00000528302 PDCD6IPQ8WUM4 868 aaKnown RBP10.02□□□□□ -0.8
SF3B2-206ENST00000528302 JADE3Q92613 823 aa10.02□□□□□ -0.8
SF3B2-206ENST00000528302 SERPINI1Q99574 410 aa10.02□□□□□ -0.8
SF3B2-206ENST00000528302 Q9H521 79 aa10.02□□□□□ -0.8
SF3B2-206ENST00000528302 SOX17Q9H6I2 414 aaPredicted RBP10.02□□□□□ -0.8
SF3B2-206ENST00000528302 GPRC5DQ9NZD1 345 aa10.02□□□□□ -0.8
SF3B2-206ENST00000528302 EGFL7Q9UHF1 273 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms