RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 C9IYK1 514 aa7.59□□□□□ -1.19
C11orf54-207ENST00000528288 LIN7AO14910 233 aaPredicted RBP7.59□□□□□ -1.19
C11orf54-207ENST00000528288 POMCP01189 267 aa7.59□□□□□ -1.19
C11orf54-207ENST00000528288 HNRNPLP14866 589 aaKnown RBP eCLIP7.59□□□□□ -1.192e-8■■□□□ 12.7
C11orf54-207ENST00000528288 CYP2B6P20813 491 aa7.59□□□□□ -1.19
C11orf54-207ENST00000528288 BRCC3P46736 316 aa7.59□□□□□ -1.19
C11orf54-207ENST00000528288 GJA9P57773 515 aa7.59□□□□□ -1.19
C11orf54-207ENST00000528288 DAOAP59103 153 aa7.59□□□□□ -1.19
C11orf54-207ENST00000528288 ZRSR2Q15696 482 aaKnown RBP7.59□□□□□ -1.19
C11orf54-207ENST00000528288 SPANXN3Q5MJ09 141 aa7.59□□□□□ -1.19
C11orf54-207ENST00000528288 SDHAF4Q5VUM1 108 aa7.59□□□□□ -1.19
C11orf54-207ENST00000528288 FAM91A1Q658Y4 838 aa7.59□□□□□ -1.19
C11orf54-207ENST00000528288 ESRP1Q6NXG1 681 aaKnown RBP7.59□□□□□ -1.19
C11orf54-207ENST00000528288 DHDDSQ86SQ9 333 aa7.59□□□□□ -1.19
C11orf54-207ENST00000528288 LDB1Q86U70 411 aaPredicted RBP7.59□□□□□ -1.19
C11orf54-207ENST00000528288 TLK2Q86UE8 772 aa7.59□□□□□ -1.19
C11orf54-207ENST00000528288 FAM35AQ86V20 835 aa7.59□□□□□ -1.19
C11orf54-207ENST00000528288 CEP97Q8IW35 865 aa7.59□□□□□ -1.19
C11orf54-207ENST00000528288 GATA6Q92908 595 aa7.59□□□□□ -1.19
C11orf54-207ENST00000528288 COLEC11Q9BWP8 271 aa7.59□□□□□ -1.19
C11orf54-207ENST00000528288 ACE2Q9BYF1 805 aaPredicted RBP7.59□□□□□ -1.19
C11orf54-207ENST00000528288 TCF7L2Q9NQB0 619 aa7.59□□□□□ -1.19
C11orf54-207ENST00000528288 DERAQ9Y315 318 aa7.59□□□□□ -1.19
C11orf54-207ENST00000528288 COL1A2P08123 1366 aa7.59□□□□□ -1.19
C11orf54-207ENST00000528288 CAPN8A6NHC0 703 aa7.58□□□□□ -1.2
C11orf54-207ENST00000528288 F8W8V4 182 aa7.58□□□□□ -1.2
C11orf54-207ENST00000528288 SCNN1GP51170 649 aa7.58□□□□□ -1.2
C11orf54-207ENST00000528288 MRPS22P82650 360 aaKnown RBP7.58□□□□□ -1.2
C11orf54-207ENST00000528288 MSLNQ13421 630 aaPredicted RBP7.58□□□□□ -1.2
C11orf54-207ENST00000528288 PAFAH1B3Q15102 231 aaKnown RBP7.58□□□□□ -1.2
C11orf54-207ENST00000528288 LSM12Q3MHD2 195 aaKnown RBP7.58□□□□□ -1.2
C11orf54-207ENST00000528288 MFSD6LQ8IWD5 586 aa7.58□□□□□ -1.2
C11orf54-207ENST00000528288 ZSCAN18Q8TBC5 510 aaPredicted RBP7.58□□□□□ -1.2
C11orf54-207ENST00000528288 ACMSDQ8TDX5 336 aa7.58□□□□□ -1.2
C11orf54-207ENST00000528288 NXNL1Q96CM4 212 aa7.58□□□□□ -1.2
C11orf54-207ENST00000528288 RCN3Q96D15 328 aa7.58□□□□□ -1.2
C11orf54-207ENST00000528288 CDRT15Q96T59 188 aa7.58□□□□□ -1.2
C11orf54-207ENST00000528288 BRD8Q9H0E9 1235 aa7.58□□□□□ -1.2
C11orf54-207ENST00000528288 TSPYL2Q9H2G4 693 aaPredicted RBP7.58□□□□□ -1.2
C11orf54-207ENST00000528288 GDAP2Q9NXN4 497 aa7.58□□□□□ -1.2
C11orf54-207ENST00000528288 MPP6Q9NZW5 540 aa7.58□□□□□ -1.2
C11orf54-207ENST00000528288 IGSF9Q9P2J2 1179 aa7.58□□□□□ -1.2
C11orf54-207ENST00000528288 TLK1Q9UKI8 766 aa7.58□□□□□ -1.2
C11orf54-207ENST00000528288 TRIM13O60858 407 aa7.58□□□□□ -1.2
C11orf54-207ENST00000528288 AHSGP02765 367 aa7.58□□□□□ -1.2
C11orf54-207ENST00000528288 SBK3P0C264 359 aa7.58□□□□□ -1.2
C11orf54-207ENST00000528288 GRK2P25098 689 aa7.58□□□□□ -1.2
C11orf54-207ENST00000528288 HARS2P49590 506 aaKnown RBP7.58□□□□□ -1.2
C11orf54-207ENST00000528288 GK3PQ14409 553 aa7.58□□□□□ -1.2
C11orf54-207ENST00000528288 EPGNQ6UW88 154 aa7.58□□□□□ -1.2
C11orf54-207ENST00000528288 TAC4Q86UU9 113 aa7.58□□□□□ -1.2
C11orf54-207ENST00000528288 TMA16Q96EY4 203 aaKnown RBP7.58□□□□□ -1.2
C11orf54-207ENST00000528288 ANKRD27Q96NW4 1050 aa7.58□□□□□ -1.2
C11orf54-207ENST00000528288 GBP5Q96PP8 586 aa7.58□□□□□ -1.2
C11orf54-207ENST00000528288 NPAS2Q99743 824 aa7.58□□□□□ -1.2
C11orf54-207ENST00000528288 FICDQ9BVA6 458 aa7.58□□□□□ -1.2
C11orf54-207ENST00000528288 ABHD16BQ9H3Z7 469 aa7.58□□□□□ -1.2
C11orf54-207ENST00000528288 FBXW11Q9UKB1 542 aa7.58□□□□□ -1.2
C11orf54-207ENST00000528288 PCDHB12Q9Y5F1 795 aa7.58□□□□□ -1.2
C11orf54-207ENST00000528288 MAGEA13PA6NCF6 341 aa7.58□□□□□ -1.2
C11orf54-207ENST00000528288 PIK3R1P27986 724 aa7.58□□□□□ -1.2
C11orf54-207ENST00000528288 ZNF789Q5FWF6 425 aa7.58□□□□□ -1.2
C11orf54-207ENST00000528288 SDCCAG8Q86SQ7 713 aaPredicted RBP7.58□□□□□ -1.2
C11orf54-207ENST00000528288 TMEM135Q86UB9 458 aa7.58□□□□□ -1.2
C11orf54-207ENST00000528288 SHCBP1Q8NEM2 672 aa7.58□□□□□ -1.2
C11orf54-207ENST00000528288 OR6Y1Q8NGX8 325 aa7.58□□□□□ -1.2
C11orf54-207ENST00000528288 RAB3IL1Q8TBN0 382 aa7.58□□□□□ -1.2
C11orf54-207ENST00000528288 PTPN18Q99952 460 aa7.58□□□□□ -1.2
C11orf54-207ENST00000528288 CHST12Q9NRB3 414 aa7.58□□□□□ -1.2
C11orf54-207ENST00000528288 TMLHEQ9NVH6 421 aa7.58□□□□□ -1.2
C11orf54-207ENST00000528288 DNAJC28Q9NX36 388 aa7.58□□□□□ -1.2
C11orf54-207ENST00000528288 RBM47A0AV96 593 aaKnown RBP7.57□□□□□ -1.2
C11orf54-207ENST00000528288 RRN3P2A6NIE6 340 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 OR4Q2P0C623 313 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 RPL34P49207 117 aaKnown RBP7.57□□□□□ -1.2
C11orf54-207ENST00000528288 PSEN2P49810 448 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 CNGA3Q16281 694 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 LAYNQ6UX15 382 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 FSTL5Q8N475 847 aaPredicted RBP7.57□□□□□ -1.2
C11orf54-207ENST00000528288 GALNT4Q8N4A0 578 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 APBB2Q92870 758 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 NT5C3BQ969T7 300 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 CMTM5Q96DZ9 223 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 MS4A4AQ96JQ5 239 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 SLC2A13Q96QE2 648 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 CASS4Q9NQ75 786 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 PAPOLBQ9NRJ5 636 aaKnown RBP7.57□□□□□ -1.2
C11orf54-207ENST00000528288 XPR1Q9UBH6 696 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 PLXNA1Q9UIW2 1896 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 MYADML2A6NDP7 307 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 ZNF487B1APH4 448 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 PGM3O95394 542 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 XRCC1P18887 633 aaPredicted RBP7.57□□□□□ -1.2
C11orf54-207ENST00000528288 WARSP23381 471 aaKnown RBP7.57□□□□□ -1.2
C11orf54-207ENST00000528288 THOP1P52888 689 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 MAXP61244 160 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 PPIDQ08752 370 aaKnown RBP7.57□□□□□ -1.2
C11orf54-207ENST00000528288 RASIP1Q5U651 963 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 TMC7Q7Z402 723 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 PLEKHH3Q7Z736 793 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms