RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 RPL10P27635 214 aaKnown RBP14.9□□□□□ -0.02
CAPN1-214ENST00000528165 PSMB4P28070 264 aa14.9□□□□□ -0.02
CAPN1-214ENST00000528165 C21orf59P57076 290 aa14.9□□□□□ -0.02
CAPN1-214ENST00000528165 GSTM4Q03013 218 aa14.9□□□□□ -0.02
CAPN1-214ENST00000528165 NSUN2Q08J23 767 aaKnown RBP eCLIP14.9□□□□□ -0.02
CAPN1-214ENST00000528165 TGFBIQ15582 683 aa14.9□□□□□ -0.02
CAPN1-214ENST00000528165 KIZQ2M2Z5 673 aa14.9□□□□□ -0.02
CAPN1-214ENST00000528165 NCBP2-AS2Q69YL0 99 aa14.9□□□□□ -0.02
CAPN1-214ENST00000528165 CDR2LQ86X02 465 aaPredicted RBP14.9□□□□□ -0.02
CAPN1-214ENST00000528165 RDH11Q8TC12 318 aa14.9□□□□□ -0.02
CAPN1-214ENST00000528165 LPGAT1Q92604 370 aa14.9□□□□□ -0.02
CAPN1-214ENST00000528165 PGLYRP2Q96PD5 576 aa14.9□□□□□ -0.02
CAPN1-214ENST00000528165 MAGEB5Q9BZ81 275 aa14.9□□□□□ -0.02
CAPN1-214ENST00000528165 IL22Q9GZX6 179 aa14.9□□□□□ -0.02
CAPN1-214ENST00000528165 UNC93B1Q9H1C4 597 aa14.9□□□□□ -0.02
CAPN1-214ENST00000528165 LRRC40Q9H9A6 602 aa14.9□□□□□ -0.02
CAPN1-214ENST00000528165 MFHAS1Q9Y4C4 1052 aa14.9□□□□□ -0.02
CAPN1-214ENST00000528165 TRIM43BA6NCK2 446 aa14.9□□□□□ -0.02
CAPN1-214ENST00000528165 SERPINB7O75635 380 aa14.9□□□□□ -0.02
CAPN1-214ENST00000528165 CKMT2P17540 419 aa14.9□□□□□ -0.02
CAPN1-214ENST00000528165 SLC6A3Q01959 620 aa14.9□□□□□ -0.02
CAPN1-214ENST00000528165 MTA1Q13330 715 aa14.9□□□□□ -0.02
CAPN1-214ENST00000528165 NHSL2Q5HYW2 709 aa14.9□□□□□ -0.02
CAPN1-214ENST00000528165 SNRNP48Q6IEG0 339 aaKnown RBP14.9□□□□□ -0.02
CAPN1-214ENST00000528165 CYP2R1Q6VVX0 501 aa14.9□□□□□ -0.02
CAPN1-214ENST00000528165 GK5Q6ZS86 529 aa14.9□□□□□ -0.02
CAPN1-214ENST00000528165 SCUBE3Q8IX30 993 aa14.9□□□□□ -0.02
CAPN1-214ENST00000528165 TNIP2Q8NFZ5 429 aa14.9□□□□□ -0.02
CAPN1-214ENST00000528165 SLC7A14Q8TBB6 771 aa14.9□□□□□ -0.02
CAPN1-214ENST00000528165 STON2Q8WXE9 905 aa14.9□□□□□ -0.02
CAPN1-214ENST00000528165 SLCO4A1Q96BD0 722 aa14.9□□□□□ -0.02
CAPN1-214ENST00000528165 SCYL1Q96KG9 808 aa14.9□□□□□ -0.02
CAPN1-214ENST00000528165 SLC38A7Q9NVC3 462 aa14.9□□□□□ -0.02
CAPN1-214ENST00000528165 PTBP2Q9UKA9 531 aaKnown RBP14.9□□□□□ -0.02
CAPN1-214ENST00000528165 PTPRFP10586 1907 aa14.9□□□□□ -0.02
CAPN1-214ENST00000528165 FUOMA2VDF0 154 aa14.89□□□□□ -0.03
CAPN1-214ENST00000528165 TIMM44O43615 452 aa14.89□□□□□ -0.03
CAPN1-214ENST00000528165 CABYRO75952 493 aa14.89□□□□□ -0.03
CAPN1-214ENST00000528165 IL18RAPO95256 599 aa14.89□□□□□ -0.03
CAPN1-214ENST00000528165 TFE3P19532 575 aaPredicted RBP14.89□□□□□ -0.03
CAPN1-214ENST00000528165 NDST1P52848 882 aa14.89□□□□□ -0.03
CAPN1-214ENST00000528165 PRKAA2P54646 552 aa14.89□□□□□ -0.03
CAPN1-214ENST00000528165 OXCT1P55809 520 aa14.89□□□□□ -0.03
CAPN1-214ENST00000528165 CTBSQ01459 385 aa14.89□□□□□ -0.03
CAPN1-214ENST00000528165 TARBP2Q15633 366 aaKnown RBP14.89□□□□□ -0.03
CAPN1-214ENST00000528165 GOLGA7BQ2TAP0 167 aa14.89□□□□□ -0.03
CAPN1-214ENST00000528165 NLGN1Q8N2Q7 840 aa14.89□□□□□ -0.03
CAPN1-214ENST00000528165 TFAP2CQ92754 450 aa14.89□□□□□ -0.03
CAPN1-214ENST00000528165 CXorf21Q9HAI6 301 aa14.89□□□□□ -0.03
CAPN1-214ENST00000528165 DUS2Q9NX74 493 aaKnown RBP14.89□□□□□ -0.03
CAPN1-214ENST00000528165 TLK1Q9UKI8 766 aa14.89□□□□□ -0.03
CAPN1-214ENST00000528165 CNOT6Q9ULM6 557 aaKnown RBP14.89□□□□□ -0.03
CAPN1-214ENST00000528165 PAPSS1O43252 624 aaPredicted RBP14.89□□□□□ -0.03
CAPN1-214ENST00000528165 PFKMP08237 780 aa14.89□□□□□ -0.03
CAPN1-214ENST00000528165 PSMD8P48556 350 aa14.89□□□□□ -0.03
CAPN1-214ENST00000528165 LAMTOR4Q0VGL1 99 aa14.89□□□□□ -0.03
CAPN1-214ENST00000528165 TRAP1Q12931 704 aaKnown RBP14.89□□□□□ -0.03
CAPN1-214ENST00000528165 RALGDSQ12967 914 aa14.89□□□□□ -0.03
CAPN1-214ENST00000528165 STX5Q13190 355 aa14.89□□□□□ -0.03
CAPN1-214ENST00000528165 ITGA7Q13683 1181 aa14.89□□□□□ -0.03
CAPN1-214ENST00000528165 MEX3CQ5U5Q3 659 aaKnown RBP14.89□□□□□ -0.03
CAPN1-214ENST00000528165 ATF7IP2Q5U623 682 aa14.89□□□□□ -0.03
CAPN1-214ENST00000528165 PMF1Q6P1K2 205 aa14.89□□□□□ -0.03
CAPN1-214ENST00000528165 C16orf87Q6PH81 154 aa14.89□□□□□ -0.03
CAPN1-214ENST00000528165 DCDC5Q6ZRR9 648 aa14.89□□□□□ -0.03
CAPN1-214ENST00000528165 SLC35B4Q969S0 331 aa14.89□□□□□ -0.03
CAPN1-214ENST00000528165 P2RY11Q96G91 374 aa14.89□□□□□ -0.03
CAPN1-214ENST00000528165 ABHD8Q96I13 439 aa14.89□□□□□ -0.03
CAPN1-214ENST00000528165 PLEKHA8Q96JA3 519 aa14.89□□□□□ -0.03
CAPN1-214ENST00000528165 KCTD15Q96SI1 283 aaPredicted RBP14.89□□□□□ -0.03
CAPN1-214ENST00000528165 SLC39A10Q9ULF5 831 aa14.89□□□□□ -0.03
CAPN1-214ENST00000528165 AFG3L2Q9Y4W6 797 aa14.89□□□□□ -0.03
CAPN1-214ENST00000528165 FBP2O00757 339 aa14.88□□□□□ -0.03
CAPN1-214ENST00000528165 AKAP10O43572 662 aa14.88□□□□□ -0.03
CAPN1-214ENST00000528165 MAFO75444 373 aaPredicted RBP14.88□□□□□ -0.03
CAPN1-214ENST00000528165 ATE1O95260 518 aa14.88□□□□□ -0.03
CAPN1-214ENST00000528165 HSPA1AP0DMV8 641 aaKnown RBP14.88□□□□□ -0.03
CAPN1-214ENST00000528165 HSPA1BP0DMV9 641 aaKnown RBP14.88□□□□□ -0.03
CAPN1-214ENST00000528165 ATXN1P54253 815 aaKnown RBP14.88□□□□□ -0.03
CAPN1-214ENST00000528165 IFRD2Q12894 506 aaPredicted RBP14.88□□□□□ -0.03
CAPN1-214ENST00000528165 HMBOX1Q6NT76 420 aa14.88□□□□□ -0.03
CAPN1-214ENST00000528165 PPP4R4Q6NUP7 873 aa14.88□□□□□ -0.03
CAPN1-214ENST00000528165 CHSY3Q70JA7 882 aa14.88□□□□□ -0.03
CAPN1-214ENST00000528165 TMEM192Q8IY95 271 aa14.88□□□□□ -0.03
CAPN1-214ENST00000528165 OR52K1Q8NGK4 314 aa14.88□□□□□ -0.03
CAPN1-214ENST00000528165 UHRF1Q96T88 793 aaPredicted RBP14.88□□□□□ -0.03
CAPN1-214ENST00000528165 APBA2Q99767 749 aa14.88□□□□□ -0.03
CAPN1-214ENST00000528165 CROCCQ5TZA2 2017 aa14.88□□□□□ -0.03
CAPN1-214ENST00000528165 COL11A2P13942 1736 aaPredicted RBP14.88□□□□□ -0.03
CAPN1-214ENST00000528165 TCRBV3S1A0A5B6 114 aa14.88□□□□□ -0.03
CAPN1-214ENST00000528165 TRIM64CA6NLI5 447 aa14.88□□□□□ -0.03
CAPN1-214ENST00000528165 SOCS2O14508 198 aa14.88□□□□□ -0.03
CAPN1-214ENST00000528165 TIPRLO75663 272 aa14.88□□□□□ -0.03
CAPN1-214ENST00000528165 ZBTB11O95625 1053 aaPredicted RBP14.88□□□□□ -0.03
CAPN1-214ENST00000528165 GOT1P17174 413 aa14.88□□□□□ -0.03
CAPN1-214ENST00000528165 SAT1P21673 171 aa14.88□□□□□ -0.03
CAPN1-214ENST00000528165 ARL4AP40617 200 aa14.88□□□□□ -0.03
CAPN1-214ENST00000528165 GLRBP48167 497 aa14.88□□□□□ -0.03
CAPN1-214ENST00000528165 DGKDQ16760 1214 aa14.88□□□□□ -0.03
CAPN1-214ENST00000528165 C12orf29Q8N999 325 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms