RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 K7ELQ4 463 aaPredicted RBP12.62□□□□□ -0.39
SRPRA-202ENST00000527817 EFSO43281 561 aa12.62□□□□□ -0.39
SRPRA-202ENST00000527817 NEBLO76041 1014 aa12.62□□□□□ -0.39
SRPRA-202ENST00000527817 TRUB2O95900 331 aaKnown RBP12.62□□□□□ -0.39
SRPRA-202ENST00000527817 F13A1P00488 732 aa12.62□□□□□ -0.39
SRPRA-202ENST00000527817 IGLV3-25P01717 112 aa12.62□□□□□ -0.39
SRPRA-202ENST00000527817 CSF2P04141 144 aa12.62□□□□□ -0.39
SRPRA-202ENST00000527817 CTSLP07711 333 aa12.62□□□□□ -0.39
SRPRA-202ENST00000527817 GPD2P43304 727 aa12.62□□□□□ -0.39
SRPRA-202ENST00000527817 ACADSBP45954 432 aa12.62□□□□□ -0.39
SRPRA-202ENST00000527817 NUMBP49757 651 aa12.62□□□□□ -0.39
SRPRA-202ENST00000527817 CLDN2P57739 230 aa12.62□□□□□ -0.39
SRPRA-202ENST00000527817 LRMPQ12912 555 aa12.62□□□□□ -0.39
SRPRA-202ENST00000527817 CLN3Q13286 438 aa12.62□□□□□ -0.39
SRPRA-202ENST00000527817 ZNF177Q13360 481 aaPredicted RBP12.62□□□□□ -0.39
SRPRA-202ENST00000527817 ZNF542PQ5EBM4 170 aa12.62□□□□□ -0.39
SRPRA-202ENST00000527817 RABGAP1LQ5R372 815 aa12.62□□□□□ -0.39
SRPRA-202ENST00000527817 TCERG1LQ5VWI1 586 aa12.62□□□□□ -0.39
SRPRA-202ENST00000527817 GCNT7Q6ZNI0 430 aa12.62□□□□□ -0.39
SRPRA-202ENST00000527817 RBM44Q6ZP01 1051 aaKnown RBP12.62□□□□□ -0.39
SRPRA-202ENST00000527817 Q6ZVU0 165 aa12.62□□□□□ -0.39
SRPRA-202ENST00000527817 PRICKLE2Q7Z3G6 844 aa12.62□□□□□ -0.39
SRPRA-202ENST00000527817 WDR36Q8NI36 951 aaKnown RBP12.62□□□□□ -0.39
SRPRA-202ENST00000527817 WDR48Q8TAF3 677 aa12.62□□□□□ -0.39
SRPRA-202ENST00000527817 SRRTQ9BXP5 876 aaKnown RBP12.62□□□□□ -0.39
SRPRA-202ENST00000527817 FZD3Q9NPG1 666 aa12.62□□□□□ -0.39
SRPRA-202ENST00000527817 ZFR2Q9UPR6 939 aaKnown RBP12.62□□□□□ -0.39
SRPRA-202ENST00000527817 PCDHB4Q9Y5E5 795 aa12.62□□□□□ -0.39
SRPRA-202ENST00000527817 HEMK1Q9Y5R4 338 aaPredicted RBP12.62□□□□□ -0.39
SRPRA-202ENST00000527817 FLNCQ14315 2725 aa12.62□□□□□ -0.39
SRPRA-202ENST00000527817 BSNQ9UPA5 3926 aa12.62□□□□□ -0.39
SRPRA-202ENST00000527817 SPTY2D1-AS1A0A0U1RR47 76 aa12.61□□□□□ -0.39
SRPRA-202ENST00000527817 FAM237AA0A1B0GTK4 181 aa12.61□□□□□ -0.39
SRPRA-202ENST00000527817 TERTO14746 1132 aaKnown RBP12.61□□□□□ -0.39
SRPRA-202ENST00000527817 TPP1O14773 563 aa12.61□□□□□ -0.39
SRPRA-202ENST00000527817 PCDH8O95206 1070 aa12.61□□□□□ -0.39
SRPRA-202ENST00000527817 PRR29P0C7W0 189 aa12.61□□□□□ -0.39
SRPRA-202ENST00000527817 SLC2A3P11169 496 aa12.61□□□□□ -0.39
SRPRA-202ENST00000527817 KRT10P13645 584 aa12.61□□□□□ -0.39
SRPRA-202ENST00000527817 NME1P15531 152 aaKnown RBP12.61□□□□□ -0.39
SRPRA-202ENST00000527817 BRD2P25440 801 aaKnown RBP12.61□□□□□ -0.39
SRPRA-202ENST00000527817 CHRNA3P32297 505 aa12.61□□□□□ -0.39
SRPRA-202ENST00000527817 NFATC3Q12968 1075 aa12.61□□□□□ -0.39
SRPRA-202ENST00000527817 FZD2Q14332 565 aa12.61□□□□□ -0.39
SRPRA-202ENST00000527817 CDKN3Q16667 212 aa12.61□□□□□ -0.39
SRPRA-202ENST00000527817 LINC00303Q3SY05 128 aa12.61□□□□□ -0.39
SRPRA-202ENST00000527817 TMEM259Q4ZIN3 620 aa12.61□□□□□ -0.39
SRPRA-202ENST00000527817 FBXL22Q6P050 247 aa12.61□□□□□ -0.39
SRPRA-202ENST00000527817 EFL1Q7Z2Z2 1120 aaKnown RBP12.61□□□□□ -0.39
SRPRA-202ENST00000527817 LURAP1LQ8IV03 231 aa12.61□□□□□ -0.39
SRPRA-202ENST00000527817 ZNF548Q8NEK5 533 aaPredicted RBP12.61□□□□□ -0.39
SRPRA-202ENST00000527817 STK32AQ8WU08 396 aa12.61□□□□□ -0.39
SRPRA-202ENST00000527817 RNF34Q969K3 372 aa12.61□□□□□ -0.39
SRPRA-202ENST00000527817 HDAC8Q9BY41 377 aa12.61□□□□□ -0.39
SRPRA-202ENST00000527817 POPDC2Q9HBU9 364 aa12.61□□□□□ -0.39
SRPRA-202ENST00000527817 STARD5Q9NSY2 213 aa12.61□□□□□ -0.39
SRPRA-202ENST00000527817 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.61□□□□□ -0.39
SRPRA-202ENST00000527817 ATXN7L1Q9ULK2 861 aaPredicted RBP12.61□□□□□ -0.39
SRPRA-202ENST00000527817 HS3ST2Q9Y278 367 aa12.61□□□□□ -0.39
SRPRA-202ENST00000527817 DOPEY2Q9Y3R5 2298 aa12.61□□□□□ -0.39
SRPRA-202ENST00000527817 COL27A1Q8IZC6 1860 aaPredicted RBP12.6□□□□□ -0.39
SRPRA-202ENST00000527817 H3BM21 787 aa12.6□□□□□ -0.39
SRPRA-202ENST00000527817 KPNA3O00505 521 aaPredicted RBP12.6□□□□□ -0.39
SRPRA-202ENST00000527817 PMM2O15305 246 aa12.6□□□□□ -0.39
SRPRA-202ENST00000527817 SLC16A3O15427 465 aaKnown RBP12.6□□□□□ -0.39
SRPRA-202ENST00000527817 AQP9O43315 295 aa12.6□□□□□ -0.39
SRPRA-202ENST00000527817 BNIP3LO60238 219 aa12.6□□□□□ -0.39
SRPRA-202ENST00000527817 TNFSF15O95150 251 aa12.6□□□□□ -0.39
SRPRA-202ENST00000527817 PRNPP04156 253 aa12.6□□□□□ -0.39
SRPRA-202ENST00000527817 SRCP12931 536 aa12.6□□□□□ -0.39
SRPRA-202ENST00000527817 SYKP43405 635 aa12.6□□□□□ -0.39
SRPRA-202ENST00000527817 INHBCP55103 352 aa12.6□□□□□ -0.39
SRPRA-202ENST00000527817 YWHAZP63104 245 aaKnown RBP12.6□□□□□ -0.39
SRPRA-202ENST00000527817 FKBP3Q00688 224 aaKnown RBP12.6□□□□□ -0.39
SRPRA-202ENST00000527817 DNM1Q05193 864 aaKnown RBP12.6□□□□□ -0.39
SRPRA-202ENST00000527817 ZSCAN23Q3MJ62 389 aa12.6□□□□□ -0.39
SRPRA-202ENST00000527817 DCAF17Q5H9S7 520 aaPredicted RBP12.6□□□□□ -0.39
SRPRA-202ENST00000527817 COLEC12Q5KU26 742 aa12.6□□□□□ -0.39
SRPRA-202ENST00000527817 GUSBP11Q6P575 273 aa12.6□□□□□ -0.39
SRPRA-202ENST00000527817 KYAT3Q6YP21 454 aaKnown RBP12.6□□□□□ -0.39
SRPRA-202ENST00000527817 ERN2Q76MJ5 926 aaKnown RBP12.6□□□□□ -0.39
SRPRA-202ENST00000527817 TMEM110Q86TL2 294 aa12.6□□□□□ -0.39
SRPRA-202ENST00000527817 CIR1Q86X95 450 aaPredicted RBP12.6□□□□□ -0.39
SRPRA-202ENST00000527817 OR52K2Q8NGK3 314 aa12.6□□□□□ -0.39
SRPRA-202ENST00000527817 OR2A12Q8NGT7 310 aa12.6□□□□□ -0.39
SRPRA-202ENST00000527817 SLC35C1Q96A29 364 aa12.6□□□□□ -0.39
SRPRA-202ENST00000527817 ARRDC3Q96B67 414 aa12.6□□□□□ -0.39
SRPRA-202ENST00000527817 FEM1CQ96JP0 617 aa12.6□□□□□ -0.39
SRPRA-202ENST00000527817 CCDC114Q96M63 670 aa12.6□□□□□ -0.39
SRPRA-202ENST00000527817 MED15Q96RN5 788 aa12.6□□□□□ -0.39
SRPRA-202ENST00000527817 SEMA3CQ99985 751 aa12.6□□□□□ -0.39
SRPRA-202ENST00000527817 SLC4A5Q9BY07 1137 aa12.6□□□□□ -0.39
SRPRA-202ENST00000527817 SLC17A9Q9BYT1 436 aa12.6□□□□□ -0.39
SRPRA-202ENST00000527817 THAP9Q9H5L6 903 aa12.6□□□□□ -0.39
SRPRA-202ENST00000527817 DYRK4Q9NR20 520 aa12.6□□□□□ -0.39
SRPRA-202ENST00000527817 ST7Q9NRC1 585 aa12.6□□□□□ -0.39
SRPRA-202ENST00000527817 VPS28Q9UK41 221 aa12.6□□□□□ -0.39
SRPRA-202ENST00000527817 TBC1D30Q9Y2I9 924 aa12.6□□□□□ -0.39
SRPRA-202ENST00000527817 CCDC187A0A096LP49 1063 aa12.59□□□□□ -0.39
SRPRA-202ENST00000527817 POM121BA6NF01 834 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms