RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 PFKMP08237 780 aa15.31■□□□□ 0.04
USP47-207ENST00000527733 MSH3P20585 1137 aa15.31■□□□□ 0.04
USP47-207ENST00000527733 MPPE1Q53F39 396 aa15.31■□□□□ 0.04
USP47-207ENST00000527733 OTOAQ7RTW8 1153 aa15.31■□□□□ 0.04
USP47-207ENST00000527733 OSTM1Q86WC4 334 aa15.31■□□□□ 0.04
USP47-207ENST00000527733 SLC35F5Q8WV83 523 aa15.31■□□□□ 0.04
USP47-207ENST00000527733 RMDN2Q96LZ7 410 aa15.31■□□□□ 0.04
USP47-207ENST00000527733 KLHL5Q96PQ7 755 aa15.31■□□□□ 0.04
USP47-207ENST00000527733 MBLAC1A4D2B0 266 aaPredicted RBP15.31■□□□□ 0.04
USP47-207ENST00000527733 ENPP3O14638 875 aa15.31■□□□□ 0.04
USP47-207ENST00000527733 C1RP00736 705 aa15.31■□□□□ 0.04
USP47-207ENST00000527733 SLC11A1P49279 550 aa15.31■□□□□ 0.04
USP47-207ENST00000527733 CAPRIN1Q14444 709 aaKnown RBP15.31■□□□□ 0.04
USP47-207ENST00000527733 HOMEZQ8IX15 550 aa15.31■□□□□ 0.04
USP47-207ENST00000527733 PYROXD2Q8N2H3 581 aa15.31■□□□□ 0.04
USP47-207ENST00000527733 PIK3R5Q8WYR1 880 aa15.31■□□□□ 0.04
USP47-207ENST00000527733 HHIPL1Q96JK4 782 aa15.31■□□□□ 0.04
USP47-207ENST00000527733 CTNNAL1Q9UBT7 734 aa15.31■□□□□ 0.04
USP47-207ENST00000527733 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.31■□□□□ 0.04
USP47-207ENST00000527733 CASQ2O14958 399 aaPredicted RBP15.31■□□□□ 0.04
USP47-207ENST00000527733 CAPN15O75808 1086 aa15.31■□□□□ 0.04
USP47-207ENST00000527733 IL1RL1Q01638 556 aa15.31■□□□□ 0.04
USP47-207ENST00000527733 SGO1Q5FBB7 561 aa15.31■□□□□ 0.04
USP47-207ENST00000527733 C6orf10Q5SRN2 563 aa15.31■□□□□ 0.04
USP47-207ENST00000527733 POTEHQ6S545 545 aa15.31■□□□□ 0.04
USP47-207ENST00000527733 AGMOQ6ZNB7 445 aa15.31■□□□□ 0.04
USP47-207ENST00000527733 STK40Q8N2I9 435 aa15.31■□□□□ 0.04
USP47-207ENST00000527733 CMTM5Q96DZ9 223 aa15.31■□□□□ 0.04
USP47-207ENST00000527733 NCF1BA6NI72 391 aaPredicted RBP15.3■□□□□ 0.04
USP47-207ENST00000527733 NCF1CA8MVU1 366 aaPredicted RBP15.3■□□□□ 0.04
USP47-207ENST00000527733 DDHD2O94830 711 aa15.3■□□□□ 0.04
USP47-207ENST00000527733 NCF1P14598 390 aaPredicted RBP15.3■□□□□ 0.04
USP47-207ENST00000527733 CLNS1AP54105 237 aaKnown RBP15.3■□□□□ 0.04
USP47-207ENST00000527733 HTRA3P83110 453 aa15.3■□□□□ 0.04
USP47-207ENST00000527733 SGCGQ13326 291 aa15.3■□□□□ 0.04
USP47-207ENST00000527733 CCDC153Q494R4 210 aa15.3■□□□□ 0.04
USP47-207ENST00000527733 SERPINA13PQ6UXR4 307 aa15.3■□□□□ 0.04
USP47-207ENST00000527733 GRIN3AQ8TCU5 1115 aa15.3■□□□□ 0.04
USP47-207ENST00000527733 PPP1R16AQ96I34 528 aa15.3■□□□□ 0.04
USP47-207ENST00000527733 MRPL1Q9BYD6 325 aaKnown RBP15.3■□□□□ 0.04
USP47-207ENST00000527733 PLK2Q9NYY3 685 aa15.3■□□□□ 0.04
USP47-207ENST00000527733 ASB3Q9Y575 518 aa15.3■□□□□ 0.04
USP47-207ENST00000527733 ORC6Q9Y5N6 252 aa15.3■□□□□ 0.04
USP47-207ENST00000527733 PTPN2P17706 415 aa15.3■□□□□ 0.04
USP47-207ENST00000527733 PGM1P36871 562 aa15.3■□□□□ 0.04
USP47-207ENST00000527733 ACOX1Q15067 660 aa15.3■□□□□ 0.04
USP47-207ENST00000527733 HIST2H2ACQ16777 129 aaPredicted RBP15.3■□□□□ 0.04
USP47-207ENST00000527733 HIST2H2AA3Q6FI13 130 aa15.3■□□□□ 0.04
USP47-207ENST00000527733 FAM43BQ6ZT52 329 aaPredicted RBP15.3■□□□□ 0.04
USP47-207ENST00000527733 SETD3Q86TU7 594 aaPredicted RBP15.3■□□□□ 0.04
USP47-207ENST00000527733 SLC22A9Q8IVM8 553 aa15.3■□□□□ 0.04
USP47-207ENST00000527733 PWWP2AQ96N64 755 aa15.3■□□□□ 0.04
USP47-207ENST00000527733 SHCBP1LQ9BZQ2 653 aa15.3■□□□□ 0.04
USP47-207ENST00000527733 CATSPERZQ9NTU4 200 aa15.3■□□□□ 0.04
USP47-207ENST00000527733 PCDHA11Q9Y5I1 949 aa15.3■□□□□ 0.04
USP47-207ENST00000527733 ARHGAP10A1A4S6 786 aa15.3■□□□□ 0.04
USP47-207ENST00000527733 ITGBL1O95965 494 aaPredicted RBP15.3■□□□□ 0.04
USP47-207ENST00000527733 ADH1CP00326 375 aa15.3■□□□□ 0.04
USP47-207ENST00000527733 NUDT17P0C025 328 aa15.3■□□□□ 0.04
USP47-207ENST00000527733 HLA-DPA1P20036 260 aa15.3■□□□□ 0.04
USP47-207ENST00000527733 HOXA11P31270 313 aaPredicted RBP15.3■□□□□ 0.04
USP47-207ENST00000527733 PEX5P50542 639 aa15.3■□□□□ 0.04
USP47-207ENST00000527733 AUHQ13825 339 aaKnown RBP15.3■□□□□ 0.04
USP47-207ENST00000527733 UNC5AQ6ZN44 842 aa15.3■□□□□ 0.04
USP47-207ENST00000527733 C12orf50Q8NA57 414 aaPredicted RBP15.3■□□□□ 0.04
USP47-207ENST00000527733 PTPRHQ9HD43 1115 aa15.3■□□□□ 0.04
USP47-207ENST00000527733 UTP6Q9NYH9 597 aaKnown RBP15.3■□□□□ 0.04
USP47-207ENST00000527733 CCT8L1PA6NM43 557 aa15.29■□□□□ 0.04
USP47-207ENST00000527733 TULP2O00295 520 aa15.29■□□□□ 0.04
USP47-207ENST00000527733 FGF1P05230 155 aa15.29■□□□□ 0.04
USP47-207ENST00000527733 C1orf220Q5T0J3 134 aa15.29■□□□□ 0.04
USP47-207ENST00000527733 SMYD5Q6GMV2 418 aa15.29■□□□□ 0.04
USP47-207ENST00000527733 RFWD3Q6PCD5 774 aa15.29■□□□□ 0.04
USP47-207ENST00000527733 SMG8Q8ND04 991 aaKnown RBP15.29■□□□□ 0.04
USP47-207ENST00000527733 QKIQ96PU8 341 aaKnown RBP eCLIP15.29■□□□□ 0.04
USP47-207ENST00000527733 ACSS3Q9H6R3 686 aa15.29■□□□□ 0.04
USP47-207ENST00000527733 FZD10Q9ULW2 581 aa15.29■□□□□ 0.04
USP47-207ENST00000527733 MYH8P13535 1937 aa15.29■□□□□ 0.04
USP47-207ENST00000527733 A0A1B0GVM2 712 aa15.29■□□□□ 0.04
USP47-207ENST00000527733 TCAF2A6NFQ2 919 aa15.29■□□□□ 0.04
USP47-207ENST00000527733 A8MX80 341 aa15.29■□□□□ 0.04
USP47-207ENST00000527733 H0Y3Z8 333 aa15.29■□□□□ 0.04
USP47-207ENST00000527733 MYO1CO00159 1063 aa15.29■□□□□ 0.04
USP47-207ENST00000527733 IRAK2O43187 625 aa15.29■□□□□ 0.04
USP47-207ENST00000527733 PCYOX1LQ8NBM8 494 aa15.29■□□□□ 0.04
USP47-207ENST00000527733 PCDH19Q8TAB3 1148 aa15.29■□□□□ 0.04
USP47-207ENST00000527733 NTAN1Q96AB6 310 aa15.29■□□□□ 0.04
USP47-207ENST00000527733 PANX3Q96QZ0 392 aa15.29■□□□□ 0.04
USP47-207ENST00000527733 RHOBTB2Q9BYZ6 727 aa15.29■□□□□ 0.04
USP47-207ENST00000527733 NMRAL1Q9HBL8 299 aa15.29■□□□□ 0.04
USP47-207ENST00000527733 BUD23O43709 281 aaKnown RBP15.29■□□□□ 0.04
USP47-207ENST00000527733 CHRNA1P02708 482 aa15.29■□□□□ 0.04
USP47-207ENST00000527733 OR56A5P0C7T3 313 aa15.29■□□□□ 0.04
USP47-207ENST00000527733 BGNP21810 368 aa15.29■□□□□ 0.04
USP47-207ENST00000527733 PBLDP30039 288 aaPredicted RBP15.29■□□□□ 0.04
USP47-207ENST00000527733 SULT2A1Q06520 285 aa15.29■□□□□ 0.04
USP47-207ENST00000527733 HIC1Q14526 733 aa15.29■□□□□ 0.04
USP47-207ENST00000527733 PDCD2Q16342 344 aaPredicted RBP15.29■□□□□ 0.04
USP47-207ENST00000527733 DNAL1Q4LDG9 190 aa15.29■□□□□ 0.04
USP47-207ENST00000527733 SH3PXD2AQ5TCZ1 1133 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms