RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 CADM4Q8NFZ8 388 aa13.68□□□□□ -0.22
CAPN1-209ENST00000527469 SNX19Q92543 992 aa13.68□□□□□ -0.22
CAPN1-209ENST00000527469 HSPH1Q92598 858 aa13.68□□□□□ -0.22
CAPN1-209ENST00000527469 PTPRN2Q92932 1015 aa13.68□□□□□ -0.22
CAPN1-209ENST00000527469 ARHGEF26Q96DR7 871 aa13.68□□□□□ -0.22
CAPN1-209ENST00000527469 MRFAP1L1Q96HT8 127 aa13.68□□□□□ -0.22
CAPN1-209ENST00000527469 CHP1Q99653 195 aa13.68□□□□□ -0.22
CAPN1-209ENST00000527469 SMOC1Q9H4F8 434 aa13.68□□□□□ -0.22
CAPN1-209ENST00000527469 SGK2Q9HBY8 427 aa13.68□□□□□ -0.22
CAPN1-209ENST00000527469 SPTLC3Q9NUV7 552 aa13.68□□□□□ -0.22
CAPN1-209ENST00000527469 ZNF212Q9UDV6 495 aa13.68□□□□□ -0.22
CAPN1-209ENST00000527469 SUSD2Q9UGT4 822 aa13.68□□□□□ -0.22
CAPN1-209ENST00000527469 CDV3Q9UKY7 258 aaKnown RBP13.68□□□□□ -0.22
CAPN1-209ENST00000527469 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.68□□□□□ -0.22
CAPN1-209ENST00000527469 ATXN2Q99700 1313 aaKnown RBP13.67□□□□□ -0.22
CAPN1-209ENST00000527469 PLXND1Q9Y4D7 1925 aa13.67□□□□□ -0.22
CAPN1-209ENST00000527469 A0A1W2PP55 124 aa13.67□□□□□ -0.22
CAPN1-209ENST00000527469 ZSCAN5CA6NGD5 496 aaPredicted RBP13.67□□□□□ -0.22
CAPN1-209ENST00000527469 FAM47DPA6NHR8 397 aa13.67□□□□□ -0.22
CAPN1-209ENST00000527469 LRRC72A6NJI9 287 aa13.67□□□□□ -0.22
CAPN1-209ENST00000527469 H3BRJ5 948 aa13.67□□□□□ -0.22
CAPN1-209ENST00000527469 K7ERQ8 282 aa13.67□□□□□ -0.22
CAPN1-209ENST00000527469 ALOX15BO15296 676 aa13.67□□□□□ -0.22
CAPN1-209ENST00000527469 BUB1O43683 1085 aa13.67□□□□□ -0.22
CAPN1-209ENST00000527469 SEMA4FO95754 770 aa13.67□□□□□ -0.22
CAPN1-209ENST00000527469 IGLV3-19P01714 112 aa13.67□□□□□ -0.22
CAPN1-209ENST00000527469 GNSP15586 552 aa13.67□□□□□ -0.22
CAPN1-209ENST00000527469 C5AR1P21730 350 aa13.67□□□□□ -0.22
CAPN1-209ENST00000527469 GLDCP23378 1020 aa13.67□□□□□ -0.22
CAPN1-209ENST00000527469 HOXD12P35452 270 aa13.67□□□□□ -0.22
CAPN1-209ENST00000527469 SERPINH1P50454 418 aaKnown RBP13.67□□□□□ -0.22
CAPN1-209ENST00000527469 YBEYP58557 167 aaPredicted RBP13.67□□□□□ -0.22
CAPN1-209ENST00000527469 TBX2Q13207 712 aaPredicted RBP13.67□□□□□ -0.22
CAPN1-209ENST00000527469 KRT81Q14533 505 aa13.67□□□□□ -0.22
CAPN1-209ENST00000527469 SMTNL2Q2TAL5 461 aa13.67□□□□□ -0.22
CAPN1-209ENST00000527469 PARP15Q460N3 678 aa13.67□□□□□ -0.22
CAPN1-209ENST00000527469 ZFYVE27Q5T4F4 411 aa13.67□□□□□ -0.22
CAPN1-209ENST00000527469 DAB2IPQ5VWQ8 1189 aa13.67□□□□□ -0.22
CAPN1-209ENST00000527469 C22orf39Q6P5X5 142 aa13.67□□□□□ -0.22
CAPN1-209ENST00000527469 RFX8Q6ZV50 586 aa13.67□□□□□ -0.22
CAPN1-209ENST00000527469 HDDC3Q8N4P3 179 aa13.67□□□□□ -0.22
CAPN1-209ENST00000527469 CEP76Q8TAP6 659 aa13.67□□□□□ -0.22
CAPN1-209ENST00000527469 FRS2Q8WU20 508 aa13.67□□□□□ -0.22
CAPN1-209ENST00000527469 ARHGEF2Q92974 986 aaKnown RBP13.67□□□□□ -0.22
CAPN1-209ENST00000527469 BTBD6Q96KE9 485 aa13.67□□□□□ -0.22
CAPN1-209ENST00000527469 PEBP4Q96S96 227 aa13.67□□□□□ -0.22
CAPN1-209ENST00000527469 KCTD15Q96SI1 283 aaPredicted RBP13.67□□□□□ -0.22
CAPN1-209ENST00000527469 FAM129BQ96TA1 746 aa13.67□□□□□ -0.22
CAPN1-209ENST00000527469 NUSAP1Q9BXS6 441 aaKnown RBP13.67□□□□□ -0.22
CAPN1-209ENST00000527469 PACSIN1Q9BY11 444 aa13.67□□□□□ -0.22
CAPN1-209ENST00000527469 CEP44Q9C0F1 390 aa13.67□□□□□ -0.22
CAPN1-209ENST00000527469 MIR1-1HGQ9H1L0 117 aa13.67□□□□□ -0.22
CAPN1-209ENST00000527469 TNKS2Q9H2K2 1166 aa13.67□□□□□ -0.22
CAPN1-209ENST00000527469 LUC7LQ9NQ29 371 aaKnown RBP13.67□□□□□ -0.22
CAPN1-209ENST00000527469 DYRK4Q9NR20 520 aa13.67□□□□□ -0.22
CAPN1-209ENST00000527469 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.67□□□□□ -0.22
CAPN1-209ENST00000527469 NDFIP2Q9NV92 336 aa13.67□□□□□ -0.22
CAPN1-209ENST00000527469 DOCK4Q8N1I0 1966 aa13.67□□□□□ -0.22
CAPN1-209ENST00000527469 CFAP54Q96N23 3096 aa13.66□□□□□ -0.22
CAPN1-209ENST00000527469 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.66□□□□□ -0.22
CAPN1-209ENST00000527469 TMEM110-MUSTN1A8MSY1 372 aa13.66□□□□□ -0.22
CAPN1-209ENST00000527469 GOLGA6L6A8MZA4 724 aa13.66□□□□□ -0.22
CAPN1-209ENST00000527469 RASA4BC9J798 803 aa13.66□□□□□ -0.22
CAPN1-209ENST00000527469 MCF2LO15068 1137 aa13.66□□□□□ -0.22
CAPN1-209ENST00000527469 RASA4O43374 803 aa13.66□□□□□ -0.22
CAPN1-209ENST00000527469 SMAD6O43541 496 aaKnown RBP13.66□□□□□ -0.22
CAPN1-209ENST00000527469 FSBPO95073 299 aa13.66□□□□□ -0.22
CAPN1-209ENST00000527469 IPO7O95373 1038 aaKnown RBP13.66□□□□□ -0.22
CAPN1-209ENST00000527469 PRNPP04156 253 aa13.66□□□□□ -0.22
CAPN1-209ENST00000527469 TMEM253P0C7T8 217 aa13.66□□□□□ -0.22
CAPN1-209ENST00000527469 GOT1P17174 413 aa13.66□□□□□ -0.22
CAPN1-209ENST00000527469 GJC1P36383 396 aa13.66□□□□□ -0.22
CAPN1-209ENST00000527469 CCDC15Q0P6D6 951 aa13.66□□□□□ -0.22
CAPN1-209ENST00000527469 SEMA3BQ13214 749 aa13.66□□□□□ -0.22
CAPN1-209ENST00000527469 SPA17Q15506 151 aa13.66□□□□□ -0.22
CAPN1-209ENST00000527469 CA9Q16790 459 aa13.66□□□□□ -0.22
CAPN1-209ENST00000527469 ASTE1Q2TB18 679 aaPredicted RBP13.66□□□□□ -0.22
CAPN1-209ENST00000527469 TRIM61Q5EBN2 209 aa13.66□□□□□ -0.22
CAPN1-209ENST00000527469 KCNT1Q5JUK3 1230 aa13.66□□□□□ -0.22
CAPN1-209ENST00000527469 PLA2G2CQ5R387 149 aa13.66□□□□□ -0.22
CAPN1-209ENST00000527469 TCEAL6Q6IPX3 200 aa13.66□□□□□ -0.22
CAPN1-209ENST00000527469 GAS2L3Q86XJ1 694 aa13.66□□□□□ -0.22
CAPN1-209ENST00000527469 SLC41A1Q8IVJ1 513 aa13.66□□□□□ -0.22
CAPN1-209ENST00000527469 ARFGAP1Q8N6T3 406 aa13.66□□□□□ -0.22
CAPN1-209ENST00000527469 PCDH20Q8N6Y1 951 aaKnown RBP13.66□□□□□ -0.22
CAPN1-209ENST00000527469 NIPA2Q8N8Q9 360 aa13.66□□□□□ -0.22
CAPN1-209ENST00000527469 GRIN3AQ8TCU5 1115 aa13.66□□□□□ -0.22
CAPN1-209ENST00000527469 TCEAL3Q969E4 200 aa13.66□□□□□ -0.22
CAPN1-209ENST00000527469 ZNF419Q96HQ0 510 aaPredicted RBP13.66□□□□□ -0.22
CAPN1-209ENST00000527469 ACE2Q9BYF1 805 aaPredicted RBP13.66□□□□□ -0.22
CAPN1-209ENST00000527469 PCED1AQ9H1Q7 454 aa13.66□□□□□ -0.22
CAPN1-209ENST00000527469 FZD4Q9ULV1 537 aa13.66□□□□□ -0.22
CAPN1-209ENST00000527469 NEU3Q9UQ49 428 aa13.66□□□□□ -0.22
CAPN1-209ENST00000527469 CXorf51AA0A1B0GTR3 108 aa13.65□□□□□ -0.22
CAPN1-209ENST00000527469 ARHGAP42A6NI28 874 aa13.65□□□□□ -0.22
CAPN1-209ENST00000527469 WASH4PA8MWX3 477 aa13.65□□□□□ -0.22
CAPN1-209ENST00000527469 KPNA3O00505 521 aaPredicted RBP13.65□□□□□ -0.22
CAPN1-209ENST00000527469 KDELR3O43731 214 aa13.65□□□□□ -0.22
CAPN1-209ENST00000527469 ZMPSTE24O75844 475 aa13.65□□□□□ -0.22
CAPN1-209ENST00000527469 TGM1P22735 817 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms