RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 SSX4O60224 188 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 NCK1P16333 377 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 EIF2AK2P19525 551 aaKnown RBP7.34□□□□□ -1.23
CTNND1-216ENST00000527467 PTX3P26022 381 aaPredicted RBP7.34□□□□□ -1.23
CTNND1-216ENST00000527467 PTPN6P29350 595 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 RFC2P35250 354 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 PHKA2P46019 1235 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 JAK3P52333 1124 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 PPP2R2BQ00005 443 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 STILQ15468 1287 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 TIGD5Q53EQ6 642 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 DEF8Q6ZN54 512 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 C15orf52Q6ZUT6 534 aaKnown RBP7.34□□□□□ -1.23
CTNND1-216ENST00000527467 STRA8Q7Z7C7 330 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 TRIM48Q8IWZ4 208 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 PXYLP1Q8TE99 480 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 PIK3R3Q92569 461 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 PRRX2Q99811 253 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 TBCDQ9BTW9 1192 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 OSBPL3Q9H4L5 887 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 VPS4AQ9UN37 437 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 PCDHB7Q9Y5E2 793 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 EMSYQ7Z589 1322 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 PLCH1Q4KWH8 1693 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 ZNF185O15231 689 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 SNAP91O60641 907 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 REM1O75628 298 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 RECQL5O94762 991 aaPredicted RBP7.34□□□□□ -1.23
CTNND1-216ENST00000527467 CCNE2O96020 404 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 ENO2P09104 434 aaPredicted RBP7.34□□□□□ -1.23
CTNND1-216ENST00000527467 HSD17B3P37058 310 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 CAP2P40123 477 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 PIGHQ14442 188 aaPredicted RBP7.34□□□□□ -1.23
CTNND1-216ENST00000527467 PREPLQ4J6C6 727 aaPredicted RBP7.34□□□□□ -1.23
CTNND1-216ENST00000527467 PPP2R2DQ66LE6 453 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 EIF5AL1Q6IS14 154 aaKnown RBP7.34□□□□□ -1.23
CTNND1-216ENST00000527467 CDC42EP5Q6NZY7 148 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 NT5DC4Q86YG4 428 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 ZNF567Q8N184 647 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 ZNF540Q8NDQ6 660 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 IPMKQ8NFU5 416 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 HDAC2Q92769 488 aaKnown RBP7.34□□□□□ -1.23
CTNND1-216ENST00000527467 HPS3Q969F9 1004 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 C18orf8Q96DM3 657 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 C11orf24Q96F05 449 aaPredicted RBP7.34□□□□□ -1.23
CTNND1-216ENST00000527467 OXCT2Q9BYC2 517 aaPredicted RBP7.34□□□□□ -1.23
CTNND1-216ENST00000527467 PIF1Q9H611 641 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 AHSPQ9NZD4 102 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 GATBO75879 557 aaKnown RBP7.34□□□□□ -1.23
CTNND1-216ENST00000527467 RLN2P04090 185 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 MPOP05164 745 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 GDI2P50395 445 aaKnown RBP7.34□□□□□ -1.23
CTNND1-216ENST00000527467 GALK1P51570 392 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 IL2P60568 153 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 SEMA3FQ13275 785 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 CRHR2Q13324 411 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 PDK3Q15120 406 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 PCSK7Q16549 785 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 VMACQ2NL98 169 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 IFNLR1Q8IU57 520 aaPredicted RBP7.34□□□□□ -1.23
CTNND1-216ENST00000527467 FBXW8Q8N3Y1 598 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 OR52K2Q8NGK3 314 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 OR5J2Q8NH18 312 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 POC1BQ8TC44 478 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 ACOT12Q8WYK0 555 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 MS4A14Q96JA4 679 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 SLC38A2Q96QD8 506 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 PABPC3Q9H361 631 aaKnown RBP7.34□□□□□ -1.23
CTNND1-216ENST00000527467 KCTD10Q9H3F6 313 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 ABHD16BQ9H3Z7 469 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 SAV1Q9H4B6 383 aaPredicted RBP7.34□□□□□ -1.23
CTNND1-216ENST00000527467 MAGEE1Q9HCI5 957 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 TCF7L2Q9NQB0 619 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 RBM12Q9NTZ6 932 aaKnown RBP7.34□□□□□ -1.23
CTNND1-216ENST00000527467 FAM49BQ9NUQ9 324 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 C3orf18Q9UK00 162 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 LSM7Q9UK45 103 aaKnown RBP7.34□□□□□ -1.23
CTNND1-216ENST00000527467 SHOC2Q9UQ13 582 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 EEF2KO00418 725 aaKnown RBP7.34□□□□□ -1.24
CTNND1-216ENST00000527467 SLC26A4O43511 780 aa7.34□□□□□ -1.24
CTNND1-216ENST00000527467 OR5F1O95221 314 aa7.34□□□□□ -1.24
CTNND1-216ENST00000527467 PLEKHA8P1O95397 391 aa7.34□□□□□ -1.24
CTNND1-216ENST00000527467 ZNF37AP17032 561 aaPredicted RBP7.34□□□□□ -1.24
CTNND1-216ENST00000527467 COPZ1P61923 177 aa7.34□□□□□ -1.24
CTNND1-216ENST00000527467 ERVK-9P63128 1117 aa7.34□□□□□ -1.24
CTNND1-216ENST00000527467 ERVK-24P63145 666 aa7.34□□□□□ -1.24
CTNND1-216ENST00000527467 NFX1Q12986 1120 aaKnown RBP7.34□□□□□ -1.24
CTNND1-216ENST00000527467 PROSER3Q2NL68 480 aa7.34□□□□□ -1.24
CTNND1-216ENST00000527467 GPR107Q5VW38 600 aa7.34□□□□□ -1.24
CTNND1-216ENST00000527467 RESP18Q5W5W9 173 aa7.34□□□□□ -1.24
CTNND1-216ENST00000527467 PLCZ1Q86YW0 608 aa7.34□□□□□ -1.24
CTNND1-216ENST00000527467 MYO1HQ8N1T3 1032 aa7.34□□□□□ -1.24
CTNND1-216ENST00000527467 SCAIQ8N9R8 606 aa7.34□□□□□ -1.24
CTNND1-216ENST00000527467 SPERTQ8NA61 448 aa7.34□□□□□ -1.24
CTNND1-216ENST00000527467 CCDC54Q8NEL0 328 aa7.34□□□□□ -1.24
CTNND1-216ENST00000527467 APBB2Q92870 758 aa7.34□□□□□ -1.24
CTNND1-216ENST00000527467 FAM84BQ96KN1 310 aaPredicted RBP7.34□□□□□ -1.24
CTNND1-216ENST00000527467 RSAD1Q9HA92 442 aa7.34□□□□□ -1.24
CTNND1-216ENST00000527467 UPB1Q9UBR1 384 aa7.34□□□□□ -1.24
CTNND1-216ENST00000527467 MEMO1Q9Y316 297 aa7.34□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms