RNA–Protein interactions for RNA: ENST00000526480.1

CSTF3-207, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3

Gene CSTF3, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-207ENST00000526480 CCDC47Q96A33 483 aaKnown RBP6.56□□□□□ -1.36
CSTF3-207ENST00000526480 CLUHP3Q96NS8 147 aa6.56□□□□□ -1.36
CSTF3-207ENST00000526480 CDADC1Q9BWV3 514 aa6.56□□□□□ -1.36
CSTF3-207ENST00000526480 ZDHHC5Q9C0B5 715 aa6.56□□□□□ -1.36
CSTF3-207ENST00000526480 IKZF4Q9H2S9 585 aa6.56□□□□□ -1.36
CSTF3-207ENST00000526480 THAP9Q9H5L6 903 aa6.56□□□□□ -1.36
CSTF3-207ENST00000526480 C17orf75Q9HAS0 396 aa6.56□□□□□ -1.36
CSTF3-207ENST00000526480 ARHGAP28Q9P2N2 729 aa6.56□□□□□ -1.36
CSTF3-207ENST00000526480 SUCLA2Q9P2R7 463 aaPredicted RBP6.56□□□□□ -1.36
CSTF3-207ENST00000526480 LIMA1Q9UHB6 759 aaKnown RBP6.56□□□□□ -1.36
CSTF3-207ENST00000526480 GIT1Q9Y2X7 761 aa6.56□□□□□ -1.36
CSTF3-207ENST00000526480 ZNF281Q9Y2X9 895 aa6.56□□□□□ -1.36
CSTF3-207ENST00000526480 YIPF1Q9Y548 306 aa6.56□□□□□ -1.36
CSTF3-207ENST00000526480 PCDHGB2Q9Y5G2 931 aa6.56□□□□□ -1.36
CSTF3-207ENST00000526480 SLCO1B1Q9Y6L6 691 aa6.56□□□□□ -1.36
CSTF3-207ENST00000526480 ZNF106Q9H2Y7 1883 aaKnown RBP6.56□□□□□ -1.36
CSTF3-207ENST00000526480 SHANK1Q9Y566 2161 aa6.55□□□□□ -1.36
CSTF3-207ENST00000526480 TDRD6O60522 2096 aaKnown RBP6.55□□□□□ -1.36
CSTF3-207ENST00000526480 BICDL2A1A5D9 508 aa6.55□□□□□ -1.36
CSTF3-207ENST00000526480 PDXKO00764 312 aa6.55□□□□□ -1.36
CSTF3-207ENST00000526480 TSPAN1O60635 241 aa6.55□□□□□ -1.36
CSTF3-207ENST00000526480 ALDH1A2O94788 518 aa6.55□□□□□ -1.36
CSTF3-207ENST00000526480 PRPF6O94906 941 aaKnown RBP6.55□□□□□ -1.36
CSTF3-207ENST00000526480 KLF8O95600 359 aaPredicted RBP6.55□□□□□ -1.36
CSTF3-207ENST00000526480 CER1O95813 267 aa6.55□□□□□ -1.36
CSTF3-207ENST00000526480 PRNPP04156 253 aa6.55□□□□□ -1.36
CSTF3-207ENST00000526480 KRT18P05783 430 aaKnown RBP6.55□□□□□ -1.36
CSTF3-207ENST00000526480 GLRA2P23416 452 aa6.55□□□□□ -1.36
CSTF3-207ENST00000526480 PBX1P40424 430 aa6.55□□□□□ -1.36
CSTF3-207ENST00000526480 NPTX2P47972 431 aa6.55□□□□□ -1.36
CSTF3-207ENST00000526480 ELAVL2Q12926 359 aaKnown RBP6.55□□□□□ -1.36
CSTF3-207ENST00000526480 STIM1Q13586 685 aa6.55□□□□□ -1.36
CSTF3-207ENST00000526480 KNOP1Q1ED39 458 aaKnown RBP6.55□□□□□ -1.36
CSTF3-207ENST00000526480 TM4SF20Q53R12 229 aa6.55□□□□□ -1.36
CSTF3-207ENST00000526480 EMC10Q5UCC4 262 aa6.55□□□□□ -1.36
CSTF3-207ENST00000526480 C1QL3Q5VWW1 255 aa6.55□□□□□ -1.36
CSTF3-207ENST00000526480 E4F1Q66K89 784 aaPredicted RBP6.55□□□□□ -1.36
CSTF3-207ENST00000526480 MAMDC2Q7Z304 686 aaPredicted RBP6.55□□□□□ -1.36
CSTF3-207ENST00000526480 PTRH1Q86Y79 214 aaKnown RBP6.55□□□□□ -1.36
CSTF3-207ENST00000526480 WFDC3Q8IUB2 231 aa6.55□□□□□ -1.36
CSTF3-207ENST00000526480 C12orf56Q8IXR9 622 aa6.55□□□□□ -1.36
CSTF3-207ENST00000526480 MMP21Q8N119 569 aa6.55□□□□□ -1.36
CSTF3-207ENST00000526480 MYCT1Q8N699 235 aa6.55□□□□□ -1.36
CSTF3-207ENST00000526480 IL17RCQ8NAC3 791 aa6.55□□□□□ -1.36
CSTF3-207ENST00000526480 LEMD2Q8NC56 503 aa6.55□□□□□ -1.36
CSTF3-207ENST00000526480 KIFAP3Q92845 792 aa6.55□□□□□ -1.36
CSTF3-207ENST00000526480 PTPRN2Q92932 1015 aa6.55□□□□□ -1.36
CSTF3-207ENST00000526480 HVCN1Q96D96 273 aa6.55□□□□□ -1.36
CSTF3-207ENST00000526480 ERLEC1Q96DZ1 483 aa6.55□□□□□ -1.36
CSTF3-207ENST00000526480 MFSD3Q96ES6 412 aa6.55□□□□□ -1.36
CSTF3-207ENST00000526480 PTCHD1Q96NR3 888 aa6.55□□□□□ -1.36
CSTF3-207ENST00000526480 NAP1L5Q96NT1 182 aaPredicted RBP6.55□□□□□ -1.36
CSTF3-207ENST00000526480 ACAP3Q96P50 834 aa6.55□□□□□ -1.36
CSTF3-207ENST00000526480 INO80BQ9C086 356 aaPredicted RBP6.55□□□□□ -1.36
CSTF3-207ENST00000526480 ECT2Q9H8V3 914 aa6.55□□□□□ -1.36
CSTF3-207ENST00000526480 NRBP2Q9NSY0 501 aa6.55□□□□□ -1.36
CSTF3-207ENST00000526480 DMAC2Q9NW81 257 aa6.55□□□□□ -1.36
CSTF3-207ENST00000526480 CALCOCO1Q9P1Z2 691 aa6.55□□□□□ -1.36
CSTF3-207ENST00000526480 LARSQ9P2J5 1176 aaKnown RBP6.55□□□□□ -1.36
CSTF3-207ENST00000526480 FTSJ1Q9UET6 329 aa6.55□□□□□ -1.36
CSTF3-207ENST00000526480 NDOR1Q9UHB4 597 aa6.55□□□□□ -1.36
CSTF3-207ENST00000526480 PCDHB1Q9Y5F3 818 aa6.55□□□□□ -1.36
CSTF3-207ENST00000526480 SCN8AQ9UQD0 1980 aa6.55□□□□□ -1.36
CSTF3-207ENST00000526480 ZNF469Q96JG9 3925 aaPredicted RBP6.55□□□□□ -1.36
CSTF3-207ENST00000526480 GOLGA6L19H0YKK7 550 aa6.54□□□□□ -1.36
CSTF3-207ENST00000526480 K7ENM7 598 aa6.54□□□□□ -1.36
CSTF3-207ENST00000526480 KCNK3O14649 394 aa6.54□□□□□ -1.36
CSTF3-207ENST00000526480 KIF20AO95235 890 aa6.54□□□□□ -1.36
CSTF3-207ENST00000526480 GCNT3O95395 438 aa6.54□□□□□ -1.36
CSTF3-207ENST00000526480 PIGRP01833 764 aa6.54□□□□□ -1.36
CSTF3-207ENST00000526480 MPOP05164 745 aa6.54□□□□□ -1.36
CSTF3-207ENST00000526480 EDN1P05305 212 aa6.54□□□□□ -1.36
CSTF3-207ENST00000526480 GABRG2P18507 467 aa6.54□□□□□ -1.36
CSTF3-207ENST00000526480 RPL10P27635 214 aaKnown RBP6.54□□□□□ -1.36
CSTF3-207ENST00000526480 CD96P40200 585 aa6.54□□□□□ -1.36
CSTF3-207ENST00000526480 OPRD1P41143 372 aa6.54□□□□□ -1.36
CSTF3-207ENST00000526480 GRK6P43250 576 aa6.54□□□□□ -1.36
CSTF3-207ENST00000526480 ACADVLP49748 655 aa6.54□□□□□ -1.36
CSTF3-207ENST00000526480 PEX3P56589 373 aa6.54□□□□□ -1.36
CSTF3-207ENST00000526480 IL9RQ01113 521 aa6.54□□□□□ -1.36
CSTF3-207ENST00000526480 BNIP3Q12983 259 aa6.54□□□□□ -1.36
CSTF3-207ENST00000526480 KCNAB2Q13303 367 aa6.54□□□□□ -1.36
CSTF3-207ENST00000526480 ALCAMQ13740 583 aa6.54□□□□□ -1.36
CSTF3-207ENST00000526480 CAPSQ13938 189 aa6.54□□□□□ -1.36
CSTF3-207ENST00000526480 NR1I3Q14994 352 aa6.54□□□□□ -1.36
CSTF3-207ENST00000526480 KRT31Q15323 416 aa6.54□□□□□ -1.36
CSTF3-207ENST00000526480 HSP90AA4PQ58FG1 418 aa6.54□□□□□ -1.36
CSTF3-207ENST00000526480 TCP11X2Q5H9J9 407 aa6.54□□□□□ -1.36
CSTF3-207ENST00000526480 MIIPQ5JXC2 388 aa6.54□□□□□ -1.36
CSTF3-207ENST00000526480 CDCA2Q69YH5 1023 aaPredicted RBP6.54□□□□□ -1.36
CSTF3-207ENST00000526480 SLC39A4Q6P5W5 647 aa6.54□□□□□ -1.36
CSTF3-207ENST00000526480 CYP2R1Q6VVX0 501 aa6.54□□□□□ -1.36
CSTF3-207ENST00000526480 ZPBP2Q6X784 338 aa6.54□□□□□ -1.36
CSTF3-207ENST00000526480 SLC36A4Q6YBV0 504 aa6.54□□□□□ -1.36
CSTF3-207ENST00000526480 MAEAQ7L5Y9 396 aa6.54□□□□□ -1.36
CSTF3-207ENST00000526480 FILIP1Q7Z7B0 1213 aa6.54□□□□□ -1.36
CSTF3-207ENST00000526480 CCDC103Q8IW40 242 aa6.54□□□□□ -1.36
CSTF3-207ENST00000526480 NELFCDQ8IXH7 590 aa6.54□□□□□ -1.36
CSTF3-207ENST00000526480 NOC3LQ8WTT2 800 aaKnown RBP6.54□□□□□ -1.36
CSTF3-207ENST00000526480 USP13Q92995 863 aaPredicted RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms