RNA–Protein interactions for RNA: ENST00000525116.5

CASP4-205, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 684 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-205ENST00000525116 SLC5A6Q9Y289 635 aa7.31□□□□□ -1.24
CASP4-205ENST00000525116 ATP8A1Q9Y2Q0 1164 aa7.31□□□□□ -1.24
CASP4-205ENST00000525116 SH3BP1Q9Y3L3 701 aa7.31□□□□□ -1.24
CASP4-205ENST00000525116 RAD54BQ9Y620 910 aa7.31□□□□□ -1.24
CASP4-205ENST00000525116 IGHV1OR15-9A0A0B4J2B8 117 aa7.3□□□□□ -1.24
CASP4-205ENST00000525116 E2F8A0AVK6 867 aa7.3□□□□□ -1.24
CASP4-205ENST00000525116 ZNF233A6NK53 670 aa7.3□□□□□ -1.24
CASP4-205ENST00000525116 GSTA4O15217 222 aa7.3□□□□□ -1.24
CASP4-205ENST00000525116 COCHO43405 550 aa7.3□□□□□ -1.24
CASP4-205ENST00000525116 NDUFS2O75306 463 aa7.3□□□□□ -1.24
CASP4-205ENST00000525116 OLFM2O95897 454 aa7.3□□□□□ -1.24
CASP4-205ENST00000525116 FTH1P19P0C7X4 201 aa7.3□□□□□ -1.24
CASP4-205ENST00000525116 LCP1P13796 627 aa7.3□□□□□ -1.24
CASP4-205ENST00000525116 PTPN1P18031 435 aaKnown RBP7.3□□□□□ -1.24
CASP4-205ENST00000525116 YWHAQP27348 245 aa7.3□□□□□ -1.24
CASP4-205ENST00000525116 NTSR1P30989 418 aa7.3□□□□□ -1.24
CASP4-205ENST00000525116 HOXD12P35452 270 aa7.3□□□□□ -1.24
CASP4-205ENST00000525116 NOP14P78316 857 aaKnown RBP7.3□□□□□ -1.24
CASP4-205ENST00000525116 SOWAHCQ53LP3 525 aaPredicted RBP7.3□□□□□ -1.24
CASP4-205ENST00000525116 RRAGBQ5VZM2 374 aa7.3□□□□□ -1.24
CASP4-205ENST00000525116 TRMT11Q7Z4G4 463 aaKnown RBP7.3□□□□□ -1.24
CASP4-205ENST00000525116 LIMS2Q7Z4I7 341 aa7.3□□□□□ -1.24
CASP4-205ENST00000525116 DDX42Q86XP3 938 aaKnown RBP eCLIP7.3□□□□□ -1.24
CASP4-205ENST00000525116 CPNE8Q86YQ8 564 aa7.3□□□□□ -1.24
CASP4-205ENST00000525116 CBWD2Q8IUF1 395 aa7.3□□□□□ -1.24
CASP4-205ENST00000525116 SLC41A1Q8IVJ1 513 aa7.3□□□□□ -1.24
CASP4-205ENST00000525116 NAXDQ8IW45 347 aa7.3□□□□□ -1.24
CASP4-205ENST00000525116 BBS7Q8IWZ6 715 aa7.3□□□□□ -1.24
CASP4-205ENST00000525116 CHPFQ8IZ52 775 aa7.3□□□□□ -1.24
CASP4-205ENST00000525116 NUP93Q8N1F7 819 aa7.3□□□□□ -1.24
CASP4-205ENST00000525116 GPD1LQ8N335 351 aa7.3□□□□□ -1.24
CASP4-205ENST00000525116 ATL2Q8NHH9 583 aa7.3□□□□□ -1.24
CASP4-205ENST00000525116 SCAMP5Q8TAC9 235 aa7.3□□□□□ -1.24
CASP4-205ENST00000525116 MDM1Q8TC05 714 aa7.3□□□□□ -1.24
CASP4-205ENST00000525116 SETD7Q8WTS6 366 aaKnown RBP7.3□□□□□ -1.24
CASP4-205ENST00000525116 FBXO32Q969P5 355 aa7.3□□□□□ -1.24
CASP4-205ENST00000525116 DNAJC19Q96DA6 116 aa7.3□□□□□ -1.24
CASP4-205ENST00000525116 C8orf48Q96LL4 319 aa7.3□□□□□ -1.24
CASP4-205ENST00000525116 KCNK16Q96T55 309 aa7.3□□□□□ -1.24
CASP4-205ENST00000525116 MED10Q9BTT4 135 aa7.3□□□□□ -1.24
CASP4-205ENST00000525116 B3GNT5Q9BYG0 378 aa7.3□□□□□ -1.24
CASP4-205ENST00000525116 NACA2Q9H009 215 aa7.3□□□□□ -1.24
CASP4-205ENST00000525116 CARS2Q9HA77 564 aaKnown RBP7.3□□□□□ -1.24
CASP4-205ENST00000525116 CD93Q9NPY3 652 aa7.3□□□□□ -1.24
CASP4-205ENST00000525116 TMEM30AQ9NV96 361 aa7.3□□□□□ -1.24
CASP4-205ENST00000525116 PANK4Q9NVE7 773 aa7.3□□□□□ -1.24
CASP4-205ENST00000525116 SEL1LQ9UBV2 794 aa7.3□□□□□ -1.24
CASP4-205ENST00000525116 CCDC39Q9UFE4 941 aa7.3□□□□□ -1.24
CASP4-205ENST00000525116 NME7Q9Y5B8 376 aa7.3□□□□□ -1.24
CASP4-205ENST00000525116 MYOFQ9NZM1 2061 aa7.3□□□□□ -1.24
CASP4-205ENST00000525116 ADAMTS20P59510 1910 aa7.3□□□□□ -1.24
CASP4-205ENST00000525116 CACNA1EQ15878 2313 aa7.29□□□□□ -1.24
CASP4-205ENST00000525116 CELSR3Q9NYQ7 3312 aa7.29□□□□□ -1.24
CASP4-205ENST00000525116 CEP192Q8TEP8 1941 aa7.29□□□□□ -1.24
CASP4-205ENST00000525116 BPTFQ12830 3046 aa7.29□□□□□ -1.24
CASP4-205ENST00000525116 A0A1W2PQF6 199 aa7.29□□□□□ -1.24
CASP4-205ENST00000525116 A8MXQ7 604 aa7.29□□□□□ -1.24
CASP4-205ENST00000525116 WASH3PC4AMC7 463 aa7.29□□□□□ -1.24
CASP4-205ENST00000525116 NEDD8-MDP1E9PL57 170 aa7.29□□□□□ -1.24
CASP4-205ENST00000525116 BMP15O95972 392 aa7.29□□□□□ -1.24
CASP4-205ENST00000525116 DLATP10515 647 aaKnown RBP7.29□□□□□ -1.24
CASP4-205ENST00000525116 TNNC1P63316 161 aa7.29□□□□□ -1.24
CASP4-205ENST00000525116 CEBPZQ03701 1054 aaKnown RBP7.29□□□□□ -1.24
CASP4-205ENST00000525116 LSAMPQ13449 338 aa7.29□□□□□ -1.24
CASP4-205ENST00000525116 HNRNPDQ14103 355 aaKnown RBP7.29□□□□□ -1.24
CASP4-205ENST00000525116 WDR72Q3MJ13 1102 aa7.29□□□□□ -1.24
CASP4-205ENST00000525116 HECTD3Q5T447 861 aa7.29□□□□□ -1.24
CASP4-205ENST00000525116 SYCP2LQ5T4T6 812 aa7.29□□□□□ -1.24
CASP4-205ENST00000525116 PIK3R6Q5UE93 754 aa7.29□□□□□ -1.24
CASP4-205ENST00000525116 GRAMD4Q6IC98 578 aa7.29□□□□□ -1.24
CASP4-205ENST00000525116 KIAA1324Q6UXG2 1013 aaKnown RBP7.29□□□□□ -1.24
CASP4-205ENST00000525116 TRAPPC11Q7Z392 1133 aa7.29□□□□□ -1.24
CASP4-205ENST00000525116 RABEPKQ7Z6M1 372 aa7.29□□□□□ -1.24
CASP4-205ENST00000525116 SLCO6A1Q86UG4 719 aa7.29□□□□□ -1.24
CASP4-205ENST00000525116 MARCH9Q86YJ5 346 aa7.29□□□□□ -1.24
CASP4-205ENST00000525116 TERB1Q8NA31 727 aa7.29□□□□□ -1.24
CASP4-205ENST00000525116 IPO4Q8TEX9 1081 aaKnown RBP7.29□□□□□ -1.24
CASP4-205ENST00000525116 HPS3Q969F9 1004 aa7.29□□□□□ -1.24
CASP4-205ENST00000525116 CCDC127Q96BQ5 260 aa7.29□□□□□ -1.24
CASP4-205ENST00000525116 LRIG1Q96JA1 1093 aa7.29□□□□□ -1.24
CASP4-205ENST00000525116 MAP6Q96JE9 813 aa7.29□□□□□ -1.24
CASP4-205ENST00000525116 TMX3Q96JJ7 454 aa7.29□□□□□ -1.24
CASP4-205ENST00000525116 CEP295NLQ96MC4 621 aa7.29□□□□□ -1.24
CASP4-205ENST00000525116 CLIC6Q96NY7 704 aa7.29□□□□□ -1.24
CASP4-205ENST00000525116 ELOVL4Q9GZR5 314 aa7.29□□□□□ -1.24
CASP4-205ENST00000525116 SPHK2Q9NRA0 654 aa7.29□□□□□ -1.24
CASP4-205ENST00000525116 DNAJC17Q9NVM6 304 aaKnown RBP7.29□□□□□ -1.24
CASP4-205ENST00000525116 SAMD15Q9P1V8 674 aa7.29□□□□□ -1.24
CASP4-205ENST00000525116 SMC3Q9UQE7 1217 aa7.29□□□□□ -1.24
CASP4-205ENST00000525116 CLIC4Q9Y696 253 aa7.29□□□□□ -1.24
CASP4-205ENST00000525116 GON4LQ3T8J9 2241 aa7.29□□□□□ -1.24
CASP4-205ENST00000525116 PCNX2A6NKB5 2137 aa7.28□□□□□ -1.24
CASP4-205ENST00000525116 PCDH15Q96QU1 1955 aa7.28□□□□□ -1.24
CASP4-205ENST00000525116 A0A1W2PQD8 194 aa7.28□□□□□ -1.24
CASP4-205ENST00000525116 EIF4E1BA6NMX2 242 aaKnown RBP7.28□□□□□ -1.24
CASP4-205ENST00000525116 MEI4A8MW99 385 aa7.28□□□□□ -1.24
CASP4-205ENST00000525116 PRRT4C9JH25 899 aa7.28□□□□□ -1.24
CASP4-205ENST00000525116 FAM47E-STBD1D6RA91 191 aa7.28□□□□□ -1.24
CASP4-205ENST00000525116 HOXC11O43248 304 aaPredicted RBP7.28□□□□□ -1.24
CASP4-205ENST00000525116 ZNF217O75362 1048 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms