RNA–Protein interactions for RNA: ENST00000525064.5

CLNS1A-202, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-202ENST00000525064 MCF2LO15068 1137 aa12.11□□□□□ -0.47
CLNS1A-202ENST00000525064 TNFSF14O43557 240 aa12.11□□□□□ -0.47
CLNS1A-202ENST00000525064 HOXB3P14651 431 aaPredicted RBP12.11□□□□□ -0.47
CLNS1A-202ENST00000525064 CHRNB2P17787 502 aa12.11□□□□□ -0.47
CLNS1A-202ENST00000525064 SCNN1AP37088 669 aa12.11□□□□□ -0.47
CLNS1A-202ENST00000525064 SNX16P57768 344 aa12.11□□□□□ -0.47
CLNS1A-202ENST00000525064 BNIP3Q12983 259 aa12.11□□□□□ -0.47
CLNS1A-202ENST00000525064 DNAJC3Q13217 504 aa12.11□□□□□ -0.47
CLNS1A-202ENST00000525064 SLC25A52Q3SY17 297 aa12.11□□□□□ -0.47
CLNS1A-202ENST00000525064 PIP5KL1Q5T9C9 394 aa12.11□□□□□ -0.47
CLNS1A-202ENST00000525064 SMYD5Q6GMV2 418 aa12.11□□□□□ -0.47
CLNS1A-202ENST00000525064 NAPEPLDQ6IQ20 393 aa12.11□□□□□ -0.47
CLNS1A-202ENST00000525064 DHRS13Q6UX07 377 aa12.11□□□□□ -0.47
CLNS1A-202ENST00000525064 EMC1Q8N766 993 aa12.11□□□□□ -0.47
CLNS1A-202ENST00000525064 SAP25Q8TEE9 199 aa12.11□□□□□ -0.47
CLNS1A-202ENST00000525064 KLK6Q92876 244 aa12.11□□□□□ -0.47
CLNS1A-202ENST00000525064 MYOCQ99972 504 aa12.11□□□□□ -0.47
CLNS1A-202ENST00000525064 MAGEB5Q9BZ81 275 aa12.11□□□□□ -0.47
CLNS1A-202ENST00000525064 VPS16Q9H269 839 aa12.11□□□□□ -0.47
CLNS1A-202ENST00000525064 TNKS2Q9H2K2 1166 aa12.11□□□□□ -0.47
CLNS1A-202ENST00000525064 LMBRD1Q9NUN5 540 aa12.11□□□□□ -0.47
CLNS1A-202ENST00000525064 FTSJ1Q9UET6 329 aa12.11□□□□□ -0.47
CLNS1A-202ENST00000525064 DACH1Q9UI36 760 aa12.11□□□□□ -0.47
CLNS1A-202ENST00000525064 HS3ST2Q9Y278 367 aa12.11□□□□□ -0.47
CLNS1A-202ENST00000525064 LOC400499M0QZD8 3231 aa12.11□□□□□ -0.47
CLNS1A-202ENST00000525064 C1QTNF3-AMACRE9PGA6 284 aa12.1□□□□□ -0.47
CLNS1A-202ENST00000525064 TLR4O00206 839 aa12.1□□□□□ -0.47
CLNS1A-202ENST00000525064 ALOX15BO15296 676 aa12.1□□□□□ -0.47
CLNS1A-202ENST00000525064 SLC7A4O43246 635 aa12.1□□□□□ -0.47
CLNS1A-202ENST00000525064 GFPT2O94808 682 aa12.1□□□□□ -0.47
CLNS1A-202ENST00000525064 ZNF18P17022 549 aa12.1□□□□□ -0.47
CLNS1A-202ENST00000525064 EPHA8P29322 1005 aaPredicted RBP12.1□□□□□ -0.47
CLNS1A-202ENST00000525064 ATP11AP98196 1134 aa12.1□□□□□ -0.47
CLNS1A-202ENST00000525064 FMO1Q01740 532 aa12.1□□□□□ -0.47
CLNS1A-202ENST00000525064 KRT31Q15323 416 aa12.1□□□□□ -0.47
CLNS1A-202ENST00000525064 C15orf59Q2T9L4 293 aaPredicted RBP12.1□□□□□ -0.47
CLNS1A-202ENST00000525064 CDKAL1Q5VV42 579 aa12.1□□□□□ -0.47
CLNS1A-202ENST00000525064 C22orf39Q6P5X5 142 aa12.1□□□□□ -0.47
CLNS1A-202ENST00000525064 LRSAM1Q6UWE0 723 aa12.1□□□□□ -0.47
CLNS1A-202ENST00000525064 KANSL1Q7Z3B3 1105 aa12.1□□□□□ -0.47
CLNS1A-202ENST00000525064 DSG4Q86SJ6 1040 aa12.1□□□□□ -0.47
CLNS1A-202ENST00000525064 TRIM69Q86WT6 500 aa12.1□□□□□ -0.47
CLNS1A-202ENST00000525064 EID2Q8N6I1 236 aa12.1□□□□□ -0.47
CLNS1A-202ENST00000525064 DCAF4L2Q8NA75 395 aa12.1□□□□□ -0.47
CLNS1A-202ENST00000525064 ATP11CQ8NB49 1132 aa12.1□□□□□ -0.47
CLNS1A-202ENST00000525064 OR2A12Q8NGT7 310 aa12.1□□□□□ -0.47
CLNS1A-202ENST00000525064 JOSD2Q8TAC2 188 aa12.1□□□□□ -0.47
CLNS1A-202ENST00000525064 STK33Q9BYT3 514 aa12.1□□□□□ -0.47
CLNS1A-202ENST00000525064 CCDC86Q9H6F5 360 aaKnown RBP12.1□□□□□ -0.47
CLNS1A-202ENST00000525064 FZD3Q9NPG1 666 aa12.1□□□□□ -0.47
CLNS1A-202ENST00000525064 GDF3Q9NR23 364 aa12.1□□□□□ -0.47
CLNS1A-202ENST00000525064 ANKRD36A6QL64 1941 aa12.09□□□□□ -0.47
CLNS1A-202ENST00000525064 ENC1O14682 589 aa12.09□□□□□ -0.47
CLNS1A-202ENST00000525064 DFNA5O60443 496 aa12.09□□□□□ -0.47
CLNS1A-202ENST00000525064 RNGTTO60942 597 aaKnown RBP12.09□□□□□ -0.47
CLNS1A-202ENST00000525064 SRGAP2O75044 1071 aa12.09□□□□□ -0.47
CLNS1A-202ENST00000525064 ZNF821O75541 412 aaPredicted RBP12.09□□□□□ -0.47
CLNS1A-202ENST00000525064 ENDOD1O94919 500 aa12.09□□□□□ -0.47
CLNS1A-202ENST00000525064 LSM8O95777 96 aaKnown RBP12.09□□□□□ -0.47
CLNS1A-202ENST00000525064 F9P00740 461 aa12.09□□□□□ -0.47
CLNS1A-202ENST00000525064 CYP1A1P04798 512 aaPredicted RBP12.09□□□□□ -0.47
CLNS1A-202ENST00000525064 ITGAVP06756 1048 aa12.09□□□□□ -0.47
CLNS1A-202ENST00000525064 PRLRP16471 622 aa12.09□□□□□ -0.47
CLNS1A-202ENST00000525064 EEF1GP26641 437 aaKnown RBP12.09□□□□□ -0.47
CLNS1A-202ENST00000525064 CHRNA3P32297 505 aa12.09□□□□□ -0.47
CLNS1A-202ENST00000525064 JAM2P57087 298 aa12.09□□□□□ -0.47
CLNS1A-202ENST00000525064 POLR2FP61218 127 aaKnown RBP12.09□□□□□ -0.47
CLNS1A-202ENST00000525064 KRT83P78385 493 aa12.09□□□□□ -0.47
CLNS1A-202ENST00000525064 MTA1Q13330 715 aa12.09□□□□□ -0.47
CLNS1A-202ENST00000525064 CAMK2BQ13554 666 aa12.09□□□□□ -0.47
CLNS1A-202ENST00000525064 CDO1Q16878 200 aa12.09□□□□□ -0.47
CLNS1A-202ENST00000525064 FAM46CQ5VWP2 391 aa12.09□□□□□ -0.47
CLNS1A-202ENST00000525064 SETD3Q86TU7 594 aaPredicted RBP12.09□□□□□ -0.47
CLNS1A-202ENST00000525064 PRPF39Q86UA1 669 aaKnown RBP12.09□□□□□ -0.47
CLNS1A-202ENST00000525064 SLC30A5Q8TAD4 765 aa12.09□□□□□ -0.47
CLNS1A-202ENST00000525064 GPT2Q8TD30 523 aa12.09□□□□□ -0.47
CLNS1A-202ENST00000525064 CNDP2Q96KP4 475 aaKnown RBP12.09□□□□□ -0.47
CLNS1A-202ENST00000525064 C1orf74Q96LT6 269 aa12.09□□□□□ -0.47
CLNS1A-202ENST00000525064 PPP1R9BQ96SB3 815 aa12.09□□□□□ -0.47
CLNS1A-202ENST00000525064 C2orf49Q9BVC5 232 aaPredicted RBP12.09□□□□□ -0.47
CLNS1A-202ENST00000525064 KDM4CQ9H3R0 1056 aa12.09□□□□□ -0.47
CLNS1A-202ENST00000525064 NLRC4Q9NPP4 1024 aa12.09□□□□□ -0.47
CLNS1A-202ENST00000525064 NDFIP2Q9NV92 336 aa12.09□□□□□ -0.47
CLNS1A-202ENST00000525064 ZFR2Q9UPR6 939 aaKnown RBP12.09□□□□□ -0.47
CLNS1A-202ENST00000525064 NEU3Q9UQ49 428 aa12.09□□□□□ -0.47
CLNS1A-202ENST00000525064 WASF2Q9Y6W5 498 aa12.09□□□□□ -0.47
CLNS1A-202ENST00000525064 URB1O60287 2271 aaKnown RBP12.08□□□□□ -0.48
CLNS1A-202ENST00000525064 KPNA3O00505 521 aaPredicted RBP12.08□□□□□ -0.48
CLNS1A-202ENST00000525064 SDC3O75056 442 aa12.08□□□□□ -0.48
CLNS1A-202ENST00000525064 ZMPSTE24O75844 475 aa12.08□□□□□ -0.48
CLNS1A-202ENST00000525064 CD160O95971 181 aa12.08□□□□□ -0.48
CLNS1A-202ENST00000525064 OR1E1P30953 314 aa12.08□□□□□ -0.48
CLNS1A-202ENST00000525064 ACVRL1P37023 503 aa12.08□□□□□ -0.48
CLNS1A-202ENST00000525064 ACADVLP49748 655 aa12.08□□□□□ -0.48
CLNS1A-202ENST00000525064 ARF5P84085 180 aa12.08□□□□□ -0.48
CLNS1A-202ENST00000525064 CDR2Q01850 454 aa12.08□□□□□ -0.48
CLNS1A-202ENST00000525064 PTP4A2Q12974 167 aa12.08□□□□□ -0.48
CLNS1A-202ENST00000525064 SMAD1Q15797 465 aaKnown RBP12.08□□□□□ -0.48
CLNS1A-202ENST00000525064 INAVAQ3KP66 663 aa12.08□□□□□ -0.48
CLNS1A-202ENST00000525064 ARSIQ5FYB1 569 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms