RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 KDELR3O43731 214 aa12.79□□□□□ -0.36
CCNC-216ENST00000523961 NDUFS2O75306 463 aa12.79□□□□□ -0.36
CCNC-216ENST00000523961 IGLV3-19P01714 112 aa12.79□□□□□ -0.36
CCNC-216ENST00000523961 KRT7P08729 469 aa12.79□□□□□ -0.36
CCNC-216ENST00000523961 VAV1P15498 845 aa12.79□□□□□ -0.36
CCNC-216ENST00000523961 CD6P30203 668 aa12.79□□□□□ -0.36
CCNC-216ENST00000523961 RECQLP46063 649 aaPredicted RBP12.79□□□□□ -0.36
CCNC-216ENST00000523961 NOP2P46087 812 aaKnown RBP12.79□□□□□ -0.36
CCNC-216ENST00000523961 SERPINH1P50454 418 aaKnown RBP12.79□□□□□ -0.36
CCNC-216ENST00000523961 HADHBP55084 474 aaKnown RBP12.79□□□□□ -0.36
CCNC-216ENST00000523961 CDH6P55285 790 aa12.79□□□□□ -0.36
CCNC-216ENST00000523961 GSDMDP57764 484 aa12.79□□□□□ -0.36
CCNC-216ENST00000523961 ARF5P84085 180 aa12.79□□□□□ -0.36
CCNC-216ENST00000523961 RPL6Q02878 288 aaKnown RBP12.79□□□□□ -0.36
CCNC-216ENST00000523961 DPYSQ14117 519 aa12.79□□□□□ -0.36
CCNC-216ENST00000523961 KRT81Q14533 505 aa12.79□□□□□ -0.36
CCNC-216ENST00000523961 CST6Q15828 149 aa12.79□□□□□ -0.36
CCNC-216ENST00000523961 C22orf39Q6P5X5 142 aa12.79□□□□□ -0.36
CCNC-216ENST00000523961 Q6ZVU0 165 aa12.79□□□□□ -0.36
CCNC-216ENST00000523961 POLNQ7Z5Q5 900 aa12.79□□□□□ -0.36
CCNC-216ENST00000523961 MMAAQ8IVH4 418 aaKnown RBP12.79□□□□□ -0.36
CCNC-216ENST00000523961 LZTR1Q8N653 840 aa12.79□□□□□ -0.36
CCNC-216ENST00000523961 FRMD1Q8N878 549 aa12.79□□□□□ -0.36
CCNC-216ENST00000523961 FAM129BQ96TA1 746 aa12.79□□□□□ -0.36
CCNC-216ENST00000523961 CEP44Q9C0F1 390 aa12.79□□□□□ -0.36
CCNC-216ENST00000523961 PCDH18Q9HCL0 1135 aa12.79□□□□□ -0.36
CCNC-216ENST00000523961 RCOR3Q9P2K3 495 aaPredicted RBP12.79□□□□□ -0.36
CCNC-216ENST00000523961 SPAG17Q6Q759 2223 aa12.78□□□□□ -0.36
CCNC-216ENST00000523961 OTOGLQ3ZCN5 2332 aa12.78□□□□□ -0.36
CCNC-216ENST00000523961 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.78□□□□□ -0.36
CCNC-216ENST00000523961 A0A0A6YYK5 440 aaPredicted RBP12.78□□□□□ -0.36
CCNC-216ENST00000523961 ARHGAP42A6NI28 874 aa12.78□□□□□ -0.36
CCNC-216ENST00000523961 MCF2LO15068 1137 aa12.78□□□□□ -0.36
CCNC-216ENST00000523961 SMAD6O43541 496 aaKnown RBP12.78□□□□□ -0.36
CCNC-216ENST00000523961 BNIP3LO60238 219 aa12.78□□□□□ -0.36
CCNC-216ENST00000523961 EPN2O95208 641 aa12.78□□□□□ -0.36
CCNC-216ENST00000523961 ADH1BP00325 375 aa12.78□□□□□ -0.36
CCNC-216ENST00000523961 GJC1P36383 396 aa12.78□□□□□ -0.36
CCNC-216ENST00000523961 SLC1A1P43005 524 aa12.78□□□□□ -0.36
CCNC-216ENST00000523961 DHPSP49366 369 aaPredicted RBP12.78□□□□□ -0.36
CCNC-216ENST00000523961 TAS2R40P59535 323 aa12.78□□□□□ -0.36
CCNC-216ENST00000523961 SERINC3Q13530 473 aa12.78□□□□□ -0.36
CCNC-216ENST00000523961 PDK2Q15119 407 aa12.78□□□□□ -0.36
CCNC-216ENST00000523961 FAM46CQ5VWP2 391 aa12.78□□□□□ -0.36
CCNC-216ENST00000523961 RAD9BQ6WBX8 426 aa12.78□□□□□ -0.36
CCNC-216ENST00000523961 USP30Q70CQ3 517 aa12.78□□□□□ -0.36
CCNC-216ENST00000523961 CPNE8Q86YQ8 564 aa12.78□□□□□ -0.36
CCNC-216ENST00000523961 MAP7D3Q8IWC1 876 aa12.78□□□□□ -0.36
CCNC-216ENST00000523961 TMEFF1Q8IYR6 380 aa12.78□□□□□ -0.36
CCNC-216ENST00000523961 PCDH20Q8N6Y1 951 aaKnown RBP12.78□□□□□ -0.36
CCNC-216ENST00000523961 KCTD6Q8NC69 237 aa12.78□□□□□ -0.36
CCNC-216ENST00000523961 FAM71BQ8TC56 605 aa12.78□□□□□ -0.36
CCNC-216ENST00000523961 ISG20Q96AZ6 181 aaKnown RBP12.78□□□□□ -0.36
CCNC-216ENST00000523961 HMCESQ96FZ2 354 aa12.78□□□□□ -0.36
CCNC-216ENST00000523961 TOE1Q96GM8 510 aaKnown RBP12.78□□□□□ -0.36
CCNC-216ENST00000523961 CSPG4P5Q96PW8 444 aa12.78□□□□□ -0.36
CCNC-216ENST00000523961 PABPC3Q9H361 631 aaKnown RBP12.78□□□□□ -0.36
CCNC-216ENST00000523961 LRRC19Q9H756 370 aa12.78□□□□□ -0.36
CCNC-216ENST00000523961 CD93Q9NPY3 652 aa12.78□□□□□ -0.36
CCNC-216ENST00000523961 WSB2Q9NYS7 404 aaPredicted RBP12.78□□□□□ -0.36
CCNC-216ENST00000523961 NCKAP1Q9Y2A7 1128 aa12.78□□□□□ -0.36
CCNC-216ENST00000523961 PCDHGA5Q9Y5G8 931 aa12.78□□□□□ -0.36
CCNC-216ENST00000523961 SDK1Q7Z5N4 2213 aa12.78□□□□□ -0.36
CCNC-216ENST00000523961 PTPRZ1P23471 2315 aaPredicted RBP12.78□□□□□ -0.36
CCNC-216ENST00000523961 FAM186AA6NE01 2351 aa12.78□□□□□ -0.36
CCNC-216ENST00000523961 PLXND1Q9Y4D7 1925 aa12.78□□□□□ -0.36
CCNC-216ENST00000523961 ABCA7Q8IZY2 2146 aa12.77□□□□□ -0.36
CCNC-216ENST00000523961 EP300Q09472 2414 aaPredicted RBP12.77□□□□□ -0.37
CCNC-216ENST00000523961 C1QTNF3-AMACRE9PGA6 284 aa12.77□□□□□ -0.37
CCNC-216ENST00000523961 BUB1O43683 1085 aa12.77□□□□□ -0.37
CCNC-216ENST00000523961 LRP3O75074 770 aa12.77□□□□□ -0.37
CCNC-216ENST00000523961 CD160O95971 181 aa12.77□□□□□ -0.37
CCNC-216ENST00000523961 IL1BP01584 269 aa12.77□□□□□ -0.37
CCNC-216ENST00000523961 C5AR1P21730 350 aa12.77□□□□□ -0.37
CCNC-216ENST00000523961 AMPD1P23109 780 aa12.77□□□□□ -0.37
CCNC-216ENST00000523961 SLC8A1P32418 973 aa12.77□□□□□ -0.37
CCNC-216ENST00000523961 PSMD8P48556 350 aa12.77□□□□□ -0.37
CCNC-216ENST00000523961 ARSEP51690 589 aa12.77□□□□□ -0.37
CCNC-216ENST00000523961 ATP13A4Q4VNC1 1196 aa12.77□□□□□ -0.37
CCNC-216ENST00000523961 ZFYVE27Q5T4F4 411 aa12.77□□□□□ -0.37
CCNC-216ENST00000523961 LRRC38Q5VT99 294 aa12.77□□□□□ -0.37
CCNC-216ENST00000523961 AFMIDQ63HM1 303 aa12.77□□□□□ -0.37
CCNC-216ENST00000523961 TMCO3Q6UWJ1 677 aa12.77□□□□□ -0.37
CCNC-216ENST00000523961 TMEM139Q8IV31 216 aa12.77□□□□□ -0.37
CCNC-216ENST00000523961 PLPP6Q8IY26 295 aa12.77□□□□□ -0.37
CCNC-216ENST00000523961 GPR161Q8N6U8 529 aaKnown RBP12.77□□□□□ -0.37
CCNC-216ENST00000523961 OR2A12Q8NGT7 310 aa12.77□□□□□ -0.37
CCNC-216ENST00000523961 GANCQ8TET4 914 aa12.77□□□□□ -0.37
CCNC-216ENST00000523961 CASKIN2Q8WXE0 1202 aa12.77□□□□□ -0.37
CCNC-216ENST00000523961 TSC1Q92574 1164 aa12.77□□□□□ -0.37
CCNC-216ENST00000523961 FOXJ1Q92949 421 aa12.77□□□□□ -0.37
CCNC-216ENST00000523961 CELF6Q96J87 481 aaKnown RBP12.77□□□□□ -0.37
CCNC-216ENST00000523961 CALR3Q96L12 384 aaKnown RBP12.77□□□□□ -0.37
CCNC-216ENST00000523961 SLC39A8Q9C0K1 460 aa12.77□□□□□ -0.37
CCNC-216ENST00000523961 KLC2Q9H0B6 622 aa12.77□□□□□ -0.37
CCNC-216ENST00000523961 BTBD1Q9H0C5 482 aa12.77□□□□□ -0.37
CCNC-216ENST00000523961 FBXL12Q9NXK8 326 aa12.77□□□□□ -0.37
CCNC-216ENST00000523961 FCF1Q9Y324 198 aaKnown RBP12.77□□□□□ -0.37
CCNC-216ENST00000523961 CHD5Q8TDI0 1954 aa12.77□□□□□ -0.37
CCNC-216ENST00000523961 VPS13AQ96RL7 3174 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms