RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 SLC8A1P32418 973 aa18.25■□□□□ 0.51
CLK4-211ENST00000522556 DRD3P35462 400 aa18.25■□□□□ 0.51
CLK4-211ENST00000522556 NNMTP40261 264 aa18.25■□□□□ 0.51
CLK4-211ENST00000522556 SERPINH1P50454 418 aaKnown RBP18.25■□□□□ 0.51
CLK4-211ENST00000522556 AIF1P55008 147 aa18.25■□□□□ 0.51
CLK4-211ENST00000522556 SLC25A11Q02978 314 aaKnown RBP18.25■□□□□ 0.51
CLK4-211ENST00000522556 ELAVL3Q14576 367 aaKnown RBP18.25■□□□□ 0.51
CLK4-211ENST00000522556 RSPO4Q2I0M5 234 aaPredicted RBP18.25■□□□□ 0.51
CLK4-211ENST00000522556 PPP6R3Q5H9R7 873 aaPredicted RBP18.25■□□□□ 0.51
CLK4-211ENST00000522556 ERMARDQ5T6L9 678 aa18.25■□□□□ 0.51
CLK4-211ENST00000522556 TP53INP2Q8IXH6 220 aa18.25■□□□□ 0.51
CLK4-211ENST00000522556 NPWQ8N729 165 aa18.25■□□□□ 0.51
CLK4-211ENST00000522556 OR2A12Q8NGT7 310 aa18.25■□□□□ 0.51
CLK4-211ENST00000522556 ZNF564Q8TBZ8 553 aaPredicted RBP18.25■□□□□ 0.51
CLK4-211ENST00000522556 ZNF419Q96HQ0 510 aaPredicted RBP18.25■□□□□ 0.51
CLK4-211ENST00000522556 CELF6Q96J87 481 aaKnown RBP18.25■□□□□ 0.51
CLK4-211ENST00000522556 NEUROG2Q9H2A3 272 aa18.25■□□□□ 0.51
CLK4-211ENST00000522556 DEF6Q9H4E7 631 aa18.25■□□□□ 0.51
CLK4-211ENST00000522556 ZWILCHQ9H900 591 aa18.25■□□□□ 0.51
CLK4-211ENST00000522556 OSGEPQ9NPF4 335 aa18.25■□□□□ 0.51
CLK4-211ENST00000522556 VPS45Q9NRW7 570 aa18.25■□□□□ 0.51
CLK4-211ENST00000522556 FBXL12Q9NXK8 326 aa18.25■□□□□ 0.51
CLK4-211ENST00000522556 LNP1A1A4G5 178 aa18.24■□□□□ 0.51
CLK4-211ENST00000522556 EEF2KO00418 725 aaKnown RBP18.24■□□□□ 0.51
CLK4-211ENST00000522556 AKR1B10O60218 316 aa18.24■□□□□ 0.51
CLK4-211ENST00000522556 TPM1P09493 284 aa18.24■□□□□ 0.51
CLK4-211ENST00000522556 IRX4P78413 519 aa18.24■□□□□ 0.51
CLK4-211ENST00000522556 LMNB2Q03252 620 aa18.24■□□□□ 0.51
CLK4-211ENST00000522556 TTC31Q49AM3 519 aaPredicted RBP18.24■□□□□ 0.51
CLK4-211ENST00000522556 AASDHQ4L235 1098 aaPredicted RBP18.24■□□□□ 0.51
CLK4-211ENST00000522556 DCAF12L1Q5VU92 463 aa18.24■□□□□ 0.51
CLK4-211ENST00000522556 PEAR1Q5VY43 1037 aaPredicted RBP18.24■□□□□ 0.51
CLK4-211ENST00000522556 SYT12Q8IV01 421 aa18.24■□□□□ 0.51
CLK4-211ENST00000522556 NIPA2Q8N8Q9 360 aa18.24■□□□□ 0.51
CLK4-211ENST00000522556 GANCQ8TET4 914 aa18.24■□□□□ 0.51
CLK4-211ENST00000522556 HSPH1Q92598 858 aa18.24■□□□□ 0.51
CLK4-211ENST00000522556 VOPP1Q96AW1 172 aa18.24■□□□□ 0.51
CLK4-211ENST00000522556 PPP1R9BQ96SB3 815 aa18.24■□□□□ 0.51
CLK4-211ENST00000522556 TM6SF2Q9BZW4 377 aa18.24■□□□□ 0.51
CLK4-211ENST00000522556 DOCK9Q9BZ29 2069 aa18.24■□□□□ 0.51
CLK4-211ENST00000522556 FAM47DPA6NHR8 397 aa18.23■□□□□ 0.51
CLK4-211ENST00000522556 MEI4A8MW99 385 aa18.23■□□□□ 0.51
CLK4-211ENST00000522556 WASH4PA8MWX3 477 aa18.23■□□□□ 0.51
CLK4-211ENST00000522556 RASA4BC9J798 803 aa18.23■□□□□ 0.51
CLK4-211ENST00000522556 RASA4O43374 803 aa18.23■□□□□ 0.51
CLK4-211ENST00000522556 RNASEH2AO75792 299 aaKnown RBP18.23■□□□□ 0.51
CLK4-211ENST00000522556 SEMA4FO95754 770 aa18.23■□□□□ 0.51
CLK4-211ENST00000522556 RARAP10276 462 aa18.23■□□□□ 0.51
CLK4-211ENST00000522556 DESP17661 470 aa18.23■□□□□ 0.51
CLK4-211ENST00000522556 PCK1P35558 622 aa18.23■□□□□ 0.51
CLK4-211ENST00000522556 GJC1P36383 396 aa18.23■□□□□ 0.51
CLK4-211ENST00000522556 ZBTB16Q05516 673 aa18.23■□□□□ 0.51
CLK4-211ENST00000522556 POLD3Q15054 466 aaPredicted RBP18.23■□□□□ 0.51
CLK4-211ENST00000522556 TRIM61Q5EBN2 209 aa18.23■□□□□ 0.51
CLK4-211ENST00000522556 SPDYCQ5MJ68 293 aa18.23■□□□□ 0.51
CLK4-211ENST00000522556 DPY19L3Q6ZPD9 716 aa18.23■□□□□ 0.51
CLK4-211ENST00000522556 RFX8Q6ZV50 586 aa18.23■□□□□ 0.51
CLK4-211ENST00000522556 CNGA4Q8IV77 575 aa18.23■□□□□ 0.51
CLK4-211ENST00000522556 HDDC3Q8N4P3 179 aa18.23■□□□□ 0.51
CLK4-211ENST00000522556 C12orf50Q8NA57 414 aaPredicted RBP18.23■□□□□ 0.51
CLK4-211ENST00000522556 OR6K2Q8NGY2 324 aa18.23■□□□□ 0.51
CLK4-211ENST00000522556 GRIN3AQ8TCU5 1115 aa18.23■□□□□ 0.51
CLK4-211ENST00000522556 OR8D1Q8WZ84 308 aa18.23■□□□□ 0.51
CLK4-211ENST00000522556 MAGEH1Q9H213 219 aa18.23■□□□□ 0.51
CLK4-211ENST00000522556 KLHL11Q9NVR0 708 aa18.23■□□□□ 0.51
CLK4-211ENST00000522556 ZNHIT6Q9NWK9 470 aaKnown RBP18.23■□□□□ 0.51
CLK4-211ENST00000522556 CWC15Q9P013 229 aaKnown RBP18.23■□□□□ 0.51
CLK4-211ENST00000522556 CTTNBP2NLQ9P2B4 639 aa18.23■□□□□ 0.51
CLK4-211ENST00000522556 IP6K2Q9UHH9 426 aa18.23■□□□□ 0.51
CLK4-211ENST00000522556 PPM1HQ9ULR3 514 aa18.23■□□□□ 0.51
CLK4-211ENST00000522556 TFR2Q9UP52 801 aa18.23■□□□□ 0.51
CLK4-211ENST00000522556 SPTBN4Q9H254 2564 aa18.23■□□□□ 0.51
CLK4-211ENST00000522556 TP53BP1Q12888 1972 aaPredicted RBP18.22■□□□□ 0.51
CLK4-211ENST00000522556 METTL12A8MUP2 240 aa18.22■□□□□ 0.51
CLK4-211ENST00000522556 MCF2LO15068 1137 aa18.22■□□□□ 0.51
CLK4-211ENST00000522556 H2AFZP0C0S5 128 aa18.22■□□□□ 0.51
CLK4-211ENST00000522556 OXTRP30559 389 aa18.22■□□□□ 0.51
CLK4-211ENST00000522556 GKP32189 559 aa18.22■□□□□ 0.51
CLK4-211ENST00000522556 TAS2R40P59535 323 aa18.22■□□□□ 0.51
CLK4-211ENST00000522556 DPYSQ14117 519 aa18.22■□□□□ 0.51
CLK4-211ENST00000522556 PIGHQ14442 188 aaPredicted RBP18.22■□□□□ 0.51
CLK4-211ENST00000522556 ATP13A4Q4VNC1 1196 aa18.22■□□□□ 0.51
CLK4-211ENST00000522556 H2AFVQ71UI9 128 aa18.22■□□□□ 0.51
CLK4-211ENST00000522556 RGL4Q8IZJ4 473 aa18.22■□□□□ 0.51
CLK4-211ENST00000522556 ZCCHC9Q8N567 271 aaKnown RBP18.22■□□□□ 0.51
CLK4-211ENST00000522556 GPR161Q8N6U8 529 aaKnown RBP18.22■□□□□ 0.51
CLK4-211ENST00000522556 OR2I1PQ8NGU4 316 aa18.22■□□□□ 0.51
CLK4-211ENST00000522556 PIP4K2CQ8TBX8 421 aa18.22■□□□□ 0.51
CLK4-211ENST00000522556 SNX19Q92543 992 aa18.22■□□□□ 0.51
CLK4-211ENST00000522556 ARRDC3Q96B67 414 aa18.22■□□□□ 0.51
CLK4-211ENST00000522556 MRFAP1L1Q96HT8 127 aa18.22■□□□□ 0.51
CLK4-211ENST00000522556 EDEM2Q9BV94 578 aa18.22■□□□□ 0.51
CLK4-211ENST00000522556 BTBD1Q9H0C5 482 aa18.22■□□□□ 0.51
CLK4-211ENST00000522556 LRRC19Q9H756 370 aa18.22■□□□□ 0.51
CLK4-211ENST00000522556 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.22■□□□□ 0.51
CLK4-211ENST00000522556 ETNK2Q9NVF9 386 aa18.22■□□□□ 0.51
CLK4-211ENST00000522556 EIF2B4Q9UI10 523 aaKnown RBP18.22■□□□□ 0.51
CLK4-211ENST00000522556 TMEM110-MUSTN1A8MSY1 372 aa18.21■□□□□ 0.51
CLK4-211ENST00000522556 FGF10O15520 208 aaPredicted RBP18.21■□□□□ 0.51
CLK4-211ENST00000522556 RNASEH1O60930 286 aaKnown RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms