RNA–Protein interactions for RNA: ENST00000522539.1

BRF2-204, Transcript of BRF2, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF2, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2-204ENST00000522539 OR2A12Q8NGT7 310 aa12.62□□□□□ -0.39
BRF2-204ENST00000522539 GPT2Q8TD30 523 aa12.62□□□□□ -0.39
BRF2-204ENST00000522539 GRAMD1AQ96CP6 724 aa12.62□□□□□ -0.39
BRF2-204ENST00000522539 PRR11Q96HE9 360 aaPredicted RBP12.62□□□□□ -0.39
BRF2-204ENST00000522539 VCPIP1Q96JH7 1222 aa12.62□□□□□ -0.39
BRF2-204ENST00000522539 KREMEN1Q96MU8 473 aa12.62□□□□□ -0.39
BRF2-204ENST00000522539 NOX5Q96PH1 765 aa12.62□□□□□ -0.39
BRF2-204ENST00000522539 MED15Q96RN5 788 aa12.62□□□□□ -0.39
BRF2-204ENST00000522539 DUSP23Q9BVJ7 150 aa12.62□□□□□ -0.39
BRF2-204ENST00000522539 THAP9Q9H5L6 903 aa12.62□□□□□ -0.39
BRF2-204ENST00000522539 CAAP1Q9H8G2 361 aa12.62□□□□□ -0.39
BRF2-204ENST00000522539 ST7Q9NRC1 585 aa12.62□□□□□ -0.39
BRF2-204ENST00000522539 SLC25A13Q9UJS0 675 aa12.62□□□□□ -0.39
BRF2-204ENST00000522539 ZFR2Q9UPR6 939 aaKnown RBP12.62□□□□□ -0.39
BRF2-204ENST00000522539 SPTA1P02549 2419 aa12.61□□□□□ -0.39
BRF2-204ENST00000522539 BSNQ9UPA5 3926 aa12.61□□□□□ -0.39
BRF2-204ENST00000522539 NEMP2A6NFY4 417 aa12.61□□□□□ -0.39
BRF2-204ENST00000522539 E5RJQ4 531 aa12.61□□□□□ -0.39
BRF2-204ENST00000522539 K7ESM1 405 aa12.61□□□□□ -0.39
BRF2-204ENST00000522539 RNF103O00237 685 aa12.61□□□□□ -0.39
BRF2-204ENST00000522539 RIOK3O14730 519 aaKnown RBP12.61□□□□□ -0.39
BRF2-204ENST00000522539 SLC31A1O15431 190 aa12.61□□□□□ -0.39
BRF2-204ENST00000522539 FFAR2O15552 330 aa12.61□□□□□ -0.39
BRF2-204ENST00000522539 ALPPL2P10696 532 aa12.61□□□□□ -0.39
BRF2-204ENST00000522539 SRCP12931 536 aa12.61□□□□□ -0.39
BRF2-204ENST00000522539 HNRNPA2B1P22626 353 aaKnown RBP12.61□□□□□ -0.39
BRF2-204ENST00000522539 AKT2P31751 481 aa12.61□□□□□ -0.39
BRF2-204ENST00000522539 CCR1P32246 355 aa12.61□□□□□ -0.39
BRF2-204ENST00000522539 DUSP3P51452 185 aaPredicted RBP12.61□□□□□ -0.39
BRF2-204ENST00000522539 CENPCQ03188 943 aa12.61□□□□□ -0.39
BRF2-204ENST00000522539 MTA1Q13330 715 aa12.61□□□□□ -0.39
BRF2-204ENST00000522539 PNOCQ13519 176 aa12.61□□□□□ -0.39
BRF2-204ENST00000522539 AUHQ13825 339 aaKnown RBP12.61□□□□□ -0.39
BRF2-204ENST00000522539 TAF5Q15542 800 aa12.61□□□□□ -0.39
BRF2-204ENST00000522539 ACCSLQ4AC99 568 aa12.61□□□□□ -0.39
BRF2-204ENST00000522539 TMEM259Q4ZIN3 620 aa12.61□□□□□ -0.39
BRF2-204ENST00000522539 CAVIN1Q6NZI2 390 aaKnown RBP12.61□□□□□ -0.39
BRF2-204ENST00000522539 DENND1BQ6P3S1 775 aa12.61□□□□□ -0.39
BRF2-204ENST00000522539 RRAGAQ7L523 313 aa12.61□□□□□ -0.39
BRF2-204ENST00000522539 DCP2Q8IU60 420 aaKnown RBP12.61□□□□□ -0.39
BRF2-204ENST00000522539 ARHGEF19Q8IW93 802 aa12.61□□□□□ -0.39
BRF2-204ENST00000522539 ARRDC3Q96B67 414 aa12.61□□□□□ -0.39
BRF2-204ENST00000522539 BMFQ96LC9 184 aa12.61□□□□□ -0.39
BRF2-204ENST00000522539 SLC46A1Q96NT5 459 aa12.61□□□□□ -0.39
BRF2-204ENST00000522539 GSDMAQ96QA5 445 aa12.61□□□□□ -0.39
BRF2-204ENST00000522539 SLC2A13Q96QE2 648 aa12.61□□□□□ -0.39
BRF2-204ENST00000522539 FZD3Q9NPG1 666 aa12.61□□□□□ -0.39
BRF2-204ENST00000522539 THSD1Q9NS62 852 aa12.61□□□□□ -0.39
BRF2-204ENST00000522539 RMND1Q9NWS8 449 aa12.61□□□□□ -0.39
BRF2-204ENST00000522539 SLC12A6Q9UHW9 1150 aa12.61□□□□□ -0.39
BRF2-204ENST00000522539 PCDHGA8Q9Y5G5 932 aa12.61□□□□□ -0.39
BRF2-204ENST00000522539 HS3ST3A1Q9Y663 406 aa12.61□□□□□ -0.39
BRF2-204ENST00000522539 CDRT15L2A8MXV6 281 aa12.6□□□□□ -0.39
BRF2-204ENST00000522539 K7ENP7 123 aa12.6□□□□□ -0.39
BRF2-204ENST00000522539 KLK10O43240 276 aa12.6□□□□□ -0.39
BRF2-204ENST00000522539 GADD45BO75293 160 aaPredicted RBP12.6□□□□□ -0.39
BRF2-204ENST00000522539 CLDN11O75508 207 aa12.6□□□□□ -0.39
BRF2-204ENST00000522539 MT-CO1P00395 513 aa12.6□□□□□ -0.39
BRF2-204ENST00000522539 GLI1P08151 1106 aa12.6□□□□□ -0.39
BRF2-204ENST00000522539 MYF5P13349 255 aa12.6□□□□□ -0.39
BRF2-204ENST00000522539 NME1P15531 152 aaKnown RBP12.6□□□□□ -0.39
BRF2-204ENST00000522539 TGM2P21980 687 aa12.6□□□□□ -0.39
BRF2-204ENST00000522539 CHRNA3P32297 505 aa12.6□□□□□ -0.39
BRF2-204ENST00000522539 CLDN2P57739 230 aa12.6□□□□□ -0.39
BRF2-204ENST00000522539 HNRNPKP61978 463 aaKnown RBP eCLIP12.6□□□□□ -0.39
BRF2-204ENST00000522539 CCDC15Q0P6D6 951 aa12.6□□□□□ -0.39
BRF2-204ENST00000522539 LY6DQ14210 128 aa12.6□□□□□ -0.39
BRF2-204ENST00000522539 FZD2Q14332 565 aa12.6□□□□□ -0.39
BRF2-204ENST00000522539 INO80CQ6PI98 192 aaPredicted RBP12.6□□□□□ -0.39
BRF2-204ENST00000522539 EHBP1Q8NDI1 1231 aa12.6□□□□□ -0.39
BRF2-204ENST00000522539 KLK6Q92876 244 aa12.6□□□□□ -0.39
BRF2-204ENST00000522539 MED8Q96G25 268 aa12.6□□□□□ -0.39
BRF2-204ENST00000522539 CEP63Q96MT8 703 aa12.6□□□□□ -0.39
BRF2-204ENST00000522539 RPRD1AQ96P16 312 aaPredicted RBP12.6□□□□□ -0.39
BRF2-204ENST00000522539 PSMB7Q99436 277 aa12.6□□□□□ -0.39
BRF2-204ENST00000522539 MYOCQ99972 504 aa12.6□□□□□ -0.39
BRF2-204ENST00000522539 CALN1Q9BXU9 219 aa12.6□□□□□ -0.39
BRF2-204ENST00000522539 HDAC8Q9BY41 377 aa12.6□□□□□ -0.39
BRF2-204ENST00000522539 CLMPQ9H6B4 373 aa12.6□□□□□ -0.39
BRF2-204ENST00000522539 ASNSD1Q9NWL6 643 aa12.6□□□□□ -0.39
BRF2-204ENST00000522539 VPS28Q9UK41 221 aa12.6□□□□□ -0.39
BRF2-204ENST00000522539 CSNK1G3Q9Y6M4 447 aa12.6□□□□□ -0.39
BRF2-204ENST00000522539 TDRD6O60522 2096 aaKnown RBP12.59□□□□□ -0.39
BRF2-204ENST00000522539 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.59□□□□□ -0.39
BRF2-204ENST00000522539 SPTY2D1-AS1A0A0U1RR47 76 aa12.59□□□□□ -0.39
BRF2-204ENST00000522539 A6NNZ2 444 aa12.59□□□□□ -0.39
BRF2-204ENST00000522539 CSF2P04141 144 aa12.59□□□□□ -0.39
BRF2-204ENST00000522539 ZNF18P17022 549 aa12.59□□□□□ -0.39
BRF2-204ENST00000522539 CLCN6P51797 869 aa12.59□□□□□ -0.39
BRF2-204ENST00000522539 CDH4P55283 916 aa12.59□□□□□ -0.39
BRF2-204ENST00000522539 CDK17Q00537 523 aa12.59□□□□□ -0.39
BRF2-204ENST00000522539 CETN1Q12798 172 aa12.59□□□□□ -0.39
BRF2-204ENST00000522539 ZNF177Q13360 481 aaPredicted RBP12.59□□□□□ -0.39
BRF2-204ENST00000522539 PDCLQ13371 301 aa12.59□□□□□ -0.39
BRF2-204ENST00000522539 FGL2Q14314 439 aa12.59□□□□□ -0.39
BRF2-204ENST00000522539 SEL1L3Q68CR1 1132 aa12.59□□□□□ -0.39
BRF2-204ENST00000522539 ZCCHC8Q6NZY4 707 aaKnown RBP12.59□□□□□ -0.39
BRF2-204ENST00000522539 FOXR2Q6PJQ5 311 aa12.59□□□□□ -0.39
BRF2-204ENST00000522539 KYAT3Q6YP21 454 aaKnown RBP12.59□□□□□ -0.39
BRF2-204ENST00000522539 Q6ZSR6 202 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms