RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-218ENST00000522222 BBOF1Q8ND07 529 aa7□□□□□ -1.29
SPIDR-218ENST00000522222 SORCS1Q8WY21 1168 aa7□□□□□ -1.29
SPIDR-218ENST00000522222 SLCO2A1Q92959 643 aa7□□□□□ -1.29
SPIDR-218ENST00000522222 RNF166Q96A37 237 aaPredicted RBP7□□□□□ -1.29
SPIDR-218ENST00000522222 AZIN2Q96A70 460 aa7□□□□□ -1.29
SPIDR-218ENST00000522222 ERLEC1Q96DZ1 483 aa7□□□□□ -1.29
SPIDR-218ENST00000522222 CABS1Q96KC9 395 aa7□□□□□ -1.29
SPIDR-218ENST00000522222 BTN2A3PQ96KV6 586 aa7□□□□□ -1.29
SPIDR-218ENST00000522222 CCT8L2Q96SF2 557 aa7□□□□□ -1.29
SPIDR-218ENST00000522222 ACOX2Q99424 681 aa7□□□□□ -1.29
SPIDR-218ENST00000522222 TBCBQ99426 244 aa7□□□□□ -1.29
SPIDR-218ENST00000522222 NPY6RQ99463 290 aa7□□□□□ -1.29
SPIDR-218ENST00000522222 DDX50Q9BQ39 737 aaKnown RBP7□□□□□ -1.29
SPIDR-218ENST00000522222 SLC2A11Q9BYW1 496 aa7□□□□□ -1.29
SPIDR-218ENST00000522222 FOXP3Q9BZS1 431 aa7□□□□□ -1.29
SPIDR-218ENST00000522222 SEMA4AQ9H3S1 761 aa7□□□□□ -1.29
SPIDR-218ENST00000522222 PIGVQ9NUD9 493 aa7□□□□□ -1.29
SPIDR-218ENST00000522222 ABCB8Q9NUT2 735 aa7□□□□□ -1.29
SPIDR-218ENST00000522222 CACNA2D2Q9NY47 1150 aa7□□□□□ -1.29
SPIDR-218ENST00000522222 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7□□□□□ -1.29
SPIDR-218ENST00000522222 CTTNBP2NLQ9P2B4 639 aa7□□□□□ -1.29
SPIDR-218ENST00000522222 AMACRQ9UHK6 382 aa7□□□□□ -1.29
SPIDR-218ENST00000522222 SLC12A6Q9UHW9 1150 aa7□□□□□ -1.29
SPIDR-218ENST00000522222 STAP1Q9ULZ2 295 aa7□□□□□ -1.29
SPIDR-218ENST00000522222 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7□□□□□ -1.29
SPIDR-218ENST00000522222 MYO18AQ92614 2054 aaKnown RBP7□□□□□ -1.29
SPIDR-218ENST00000522222 EP300Q09472 2414 aaPredicted RBP7□□□□□ -1.29
SPIDR-218ENST00000522222 EML5Q05BV3 1969 aa7□□□□□ -1.29
SPIDR-218ENST00000522222 MYO15AQ9UKN7 3530 aa7□□□□□ -1.29
SPIDR-218ENST00000522222 CCDC163A0A0D9SF12 145 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 TCRBV21S2A2A0A5A6 115 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 TYW5A2RUC4 315 aaKnown RBP6.99□□□□□ -1.29
SPIDR-218ENST00000522222 ZSCAN5CA6NGD5 496 aaPredicted RBP6.99□□□□□ -1.29
SPIDR-218ENST00000522222 KCNU1A8MYU2 1149 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 F5H5T6 163 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 M0QYT0 321 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 MYO1FO00160 1098 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 TTI1O43156 1089 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 HRO43593 1189 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 CYP1A2P05177 515 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 GSTA1P08263 222 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 SLC2A3P11169 496 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 PABPC1P11940 636 aaKnown RBP6.99□□□□□ -1.29
SPIDR-218ENST00000522222 UNGP13051 313 aaPredicted RBP6.99□□□□□ -1.29
SPIDR-218ENST00000522222 PRKCHP24723 683 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 NTSR1P30989 418 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 CCR1P32246 355 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 HPDP32754 393 aaPredicted RBP6.99□□□□□ -1.29
SPIDR-218ENST00000522222 CETN2P41208 172 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 DGKEP52429 567 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 ATXN1P54253 815 aaKnown RBP6.99□□□□□ -1.29
SPIDR-218ENST00000522222 GSCP56915 257 aaPredicted RBP6.99□□□□□ -1.29
SPIDR-218ENST00000522222 RWDD2BP57060 319 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 GUCY1A3Q02108 690 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 DEUP1Q05D60 604 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 CDH18Q13634 790 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 ITIH4Q14624 930 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 EIF4HQ15056 248 aaKnown RBP6.99□□□□□ -1.29
SPIDR-218ENST00000522222 UAP1Q16222 522 aaPredicted RBP6.99□□□□□ -1.29
SPIDR-218ENST00000522222 FUT11Q495W5 492 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 MPP7Q5T2T1 576 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 SWT1Q5T5J6 900 aaKnown RBP6.99□□□□□ -1.29
SPIDR-218ENST00000522222 TMEM215Q68D42 235 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 PRR23BQ6ZRT6 265 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 NUDT18Q6ZVK8 323 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 RASSF3Q86WH2 238 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 PHF13Q86YI8 300 aaPredicted RBP6.99□□□□□ -1.29
SPIDR-218ENST00000522222 JAMLQ86YT9 394 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 MFN1Q8IWA4 741 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 CHPFQ8IZ52 775 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 CFAP52Q8N1V2 620 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 SH2D3CQ8N5H7 860 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 CAMKK1Q8N5S9 505 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 EMC1Q8N766 993 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 ATP6V0D2Q8N8Y2 350 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 MDGA1Q8NFP4 955 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 JOSD2Q8TAC2 188 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 CCHCR1Q8TD31 782 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 KCNV2Q8TDN2 545 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 WFIKKN2Q8TEU8 576 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 HMGB4Q8WW32 186 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 GAB3Q8WWW8 586 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 RNF34Q969K3 372 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 TLCD1Q96CP7 247 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 TMA16Q96EY4 203 aaKnown RBP6.99□□□□□ -1.29
SPIDR-218ENST00000522222 LMLNQ96KR4 655 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 CFAP57Q96MR6 1250 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 PRMT1Q99873 361 aaKnown RBP6.99□□□□□ -1.29
SPIDR-218ENST00000522222 GABRG3Q99928 467 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 AP1M1Q9BXS5 423 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 TXLNGYQ9BZA5 131 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 TPSD1Q9BZJ3 242 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 CIPCQ9C0C6 399 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 CENPHQ9H3R5 247 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 CCDC134Q9H6E4 229 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 YY1AP1Q9H869 796 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 CD248Q9HCU0 757 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 ANLNQ9NQW6 1124 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 RRN3Q9NYV6 651 aa6.99□□□□□ -1.29
SPIDR-218ENST00000522222 TAS2R14Q9NYV8 317 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms