RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 RENBPP51606 427 aa21.8■■□□□ 1.08
R3HCC1-208ENST00000522012 PLTPP55058 493 aa21.8■■□□□ 1.08
R3HCC1-208ENST00000522012 BASP1P80723 227 aaKnown RBP21.8■■□□□ 1.08
R3HCC1-208ENST00000522012 MARC1Q5VT66 337 aa21.8■■□□□ 1.08
R3HCC1-208ENST00000522012 APCDD1Q8J025 514 aa21.8■■□□□ 1.08
R3HCC1-208ENST00000522012 ZNF557Q8N988 423 aaPredicted RBP21.8■■□□□ 1.08
R3HCC1-208ENST00000522012 BBOF1Q8ND07 529 aa21.8■■□□□ 1.08
R3HCC1-208ENST00000522012 FATE1Q969F0 183 aa21.8■■□□□ 1.08
R3HCC1-208ENST00000522012 ALG14Q96F25 216 aa21.8■■□□□ 1.08
R3HCC1-208ENST00000522012 IL12RB2Q99665 862 aa21.8■■□□□ 1.08
R3HCC1-208ENST00000522012 TRMT61BQ9BVS5 477 aaKnown RBP21.8■■□□□ 1.08
R3HCC1-208ENST00000522012 ANAPC5Q9UJX4 755 aa21.8■■□□□ 1.08
R3HCC1-208ENST00000522012 TPX2Q9ULW0 747 aaKnown RBP21.8■■□□□ 1.08
R3HCC1-208ENST00000522012 NFU1Q9UMS0 254 aa21.8■■□□□ 1.08
R3HCC1-208ENST00000522012 NUMBLQ9Y6R0 609 aa21.8■■□□□ 1.08
R3HCC1-208ENST00000522012 DNALI1O14645 258 aaPredicted RBP21.8■■□□□ 1.08
R3HCC1-208ENST00000522012 HOXC11O43248 304 aaPredicted RBP21.8■■□□□ 1.08
R3HCC1-208ENST00000522012 SNAP91O60641 907 aa21.8■■□□□ 1.08
R3HCC1-208ENST00000522012 METTL18O95568 372 aa21.8■■□□□ 1.08
R3HCC1-208ENST00000522012 GDI1P31150 447 aa21.8■■□□□ 1.08
R3HCC1-208ENST00000522012 ITGA8P53708 1063 aa21.8■■□□□ 1.08
R3HCC1-208ENST00000522012 HNRNPDQ14103 355 aaKnown RBP21.8■■□□□ 1.08
R3HCC1-208ENST00000522012 FAXCQ5TGI0 409 aa21.8■■□□□ 1.08
R3HCC1-208ENST00000522012 ASTLQ6HA08 431 aaPredicted RBP21.8■■□□□ 1.08
R3HCC1-208ENST00000522012 GSPT2Q8IYD1 628 aaKnown RBP21.8■■□□□ 1.08
R3HCC1-208ENST00000522012 MAFAQ8NHW3 353 aaPredicted RBP21.8■■□□□ 1.08
R3HCC1-208ENST00000522012 TEKT5Q96M29 485 aa21.8■■□□□ 1.08
R3HCC1-208ENST00000522012 XPO6Q96QU8 1125 aaKnown RBP21.8■■□□□ 1.08
R3HCC1-208ENST00000522012 SLC2A11Q9BYW1 496 aa21.8■■□□□ 1.08
R3HCC1-208ENST00000522012 ECT2Q9H8V3 914 aa21.8■■□□□ 1.08
R3HCC1-208ENST00000522012 PDFQ9HBH1 243 aa21.8■■□□□ 1.08
R3HCC1-208ENST00000522012 HPS4Q9NQG7 708 aa21.8■■□□□ 1.08
R3HCC1-208ENST00000522012 TTLL3Q9Y4R7 772 aa21.8■■□□□ 1.08
R3HCC1-208ENST00000522012 NUP210Q8TEM1 1887 aaPredicted RBP21.79■■□□□ 1.08
R3HCC1-208ENST00000522012 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.79■■□□□ 1.08
R3HCC1-208ENST00000522012 TNFRSF8P28908 595 aa21.79■■□□□ 1.08
R3HCC1-208ENST00000522012 HLA-FP30511 346 aa21.79■■□□□ 1.08
R3HCC1-208ENST00000522012 SLC10A7Q0GE19 358 aa21.79■■□□□ 1.08
R3HCC1-208ENST00000522012 NR1H3Q13133 447 aa21.79■■□□□ 1.08
R3HCC1-208ENST00000522012 SLC12A1Q13621 1099 aa21.79■■□□□ 1.08
R3HCC1-208ENST00000522012 HTR4Q13639 388 aa21.79■■□□□ 1.08
R3HCC1-208ENST00000522012 LBRQ14739 615 aaKnown RBP21.79■■□□□ 1.08
R3HCC1-208ENST00000522012 PARP6Q2NL67 630 aa21.79■■□□□ 1.08
R3HCC1-208ENST00000522012 TMCO4Q5TGY1 634 aa21.79■■□□□ 1.08
R3HCC1-208ENST00000522012 ITPRIPL1Q6GPH6 555 aa21.79■■□□□ 1.08
R3HCC1-208ENST00000522012 CPA6Q8N4T0 437 aa21.79■■□□□ 1.08
R3HCC1-208ENST00000522012 CNTD1Q8N815 330 aa21.79■■□□□ 1.08
R3HCC1-208ENST00000522012 DCAF4L2Q8NA75 395 aa21.79■■□□□ 1.08
R3HCC1-208ENST00000522012 TTC8Q8TAM2 541 aa21.79■■□□□ 1.08
R3HCC1-208ENST00000522012 LMLNQ96KR4 655 aa21.79■■□□□ 1.08
R3HCC1-208ENST00000522012 ZNF599Q96NL3 588 aa21.79■■□□□ 1.08
R3HCC1-208ENST00000522012 C2orf49Q9BVC5 232 aaPredicted RBP21.79■■□□□ 1.08
R3HCC1-208ENST00000522012 ETNK1Q9HBU6 452 aa21.79■■□□□ 1.08
R3HCC1-208ENST00000522012 UBA2Q9UBT2 640 aaPredicted RBP21.79■■□□□ 1.08
R3HCC1-208ENST00000522012 RSPH14Q9UHP6 348 aa21.79■■□□□ 1.08
R3HCC1-208ENST00000522012 GGA2Q9UJY4 613 aa21.79■■□□□ 1.08
R3HCC1-208ENST00000522012 ACTL7AQ9Y615 435 aa21.79■■□□□ 1.08
R3HCC1-208ENST00000522012 OTOL1A6NHN0 477 aaPredicted RBP21.78■■□□□ 1.08
R3HCC1-208ENST00000522012 C2CD4DB7Z1M9 353 aa21.78■■□□□ 1.08
R3HCC1-208ENST00000522012 ANHXE9PGG2 379 aa21.78■■□□□ 1.08
R3HCC1-208ENST00000522012 CHADO15335 359 aa21.78■■□□□ 1.08
R3HCC1-208ENST00000522012 CACNG3O60359 315 aa21.78■■□□□ 1.08
R3HCC1-208ENST00000522012 MYBL2P10244 700 aa21.78■■□□□ 1.08
R3HCC1-208ENST00000522012 MMP13P45452 471 aa21.78■■□□□ 1.08
R3HCC1-208ENST00000522012 RUNX3Q13761 415 aa21.78■■□□□ 1.08
R3HCC1-208ENST00000522012 PLEKHG6Q3KR16 790 aa21.78■■□□□ 1.08
R3HCC1-208ENST00000522012 ZDHHC24Q6UX98 284 aa21.78■■□□□ 1.08
R3HCC1-208ENST00000522012 LINGO4Q6UY18 593 aa21.78■■□□□ 1.08
R3HCC1-208ENST00000522012 PCGF5Q86SE9 256 aa21.78■■□□□ 1.08
R3HCC1-208ENST00000522012 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.78■■□□□ 1.08
R3HCC1-208ENST00000522012 ART4Q93070 314 aa21.78■■□□□ 1.08
R3HCC1-208ENST00000522012 NEUROG2Q9H2A3 272 aa21.78■■□□□ 1.08
R3HCC1-208ENST00000522012 DNAJC17Q9NVM6 304 aaKnown RBP21.78■■□□□ 1.08
R3HCC1-208ENST00000522012 VPS51Q9UID3 782 aa21.78■■□□□ 1.08
R3HCC1-208ENST00000522012 ZMPSTE24O75844 475 aa21.77■■□□□ 1.08
R3HCC1-208ENST00000522012 PABPC1P11940 636 aaKnown RBP21.77■■□□□ 1.08
R3HCC1-208ENST00000522012 NFKB1P19838 968 aa21.77■■□□□ 1.08
R3HCC1-208ENST00000522012 PSMB4P28070 264 aa21.77■■□□□ 1.08
R3HCC1-208ENST00000522012 CD68P34810 354 aaPredicted RBP21.77■■□□□ 1.08
R3HCC1-208ENST00000522012 FDFT1P37268 417 aa21.77■■□□□ 1.08
R3HCC1-208ENST00000522012 PLK1P53350 603 aa21.77■■□□□ 1.08
R3HCC1-208ENST00000522012 ARF5P84085 180 aa21.77■■□□□ 1.08
R3HCC1-208ENST00000522012 PITRM1Q5JRX3 1037 aa21.77■■□□□ 1.08
R3HCC1-208ENST00000522012 SYCP2LQ5T4T6 812 aa21.77■■□□□ 1.08
R3HCC1-208ENST00000522012 RNASEH2BQ5TBB1 312 aaKnown RBP21.77■■□□□ 1.08
R3HCC1-208ENST00000522012 PPIL6Q8IXY8 311 aa21.77■■□□□ 1.08
R3HCC1-208ENST00000522012 TEX26Q8N6G2 289 aa21.77■■□□□ 1.08
R3HCC1-208ENST00000522012 CPT1BQ92523 772 aa21.77■■□□□ 1.08
R3HCC1-208ENST00000522012 ZNF419Q96HQ0 510 aaPredicted RBP21.77■■□□□ 1.08
R3HCC1-208ENST00000522012 PHF7Q9BWX1 381 aaPredicted RBP21.77■■□□□ 1.08
R3HCC1-208ENST00000522012 GBA3Q9H227 469 aa21.77■■□□□ 1.08
R3HCC1-208ENST00000522012 NT5MQ9NPB1 228 aa21.77■■□□□ 1.08
R3HCC1-208ENST00000522012 ZDHHC18Q9NUE0 388 aa21.77■■□□□ 1.08
R3HCC1-208ENST00000522012 INTS6Q9UL03 887 aaKnown RBP21.77■■□□□ 1.08
R3HCC1-208ENST00000522012 E7EVH7 732 aa21.76■■□□□ 1.07
R3HCC1-208ENST00000522012 NDC80O14777 642 aa21.76■■□□□ 1.07
R3HCC1-208ENST00000522012 TRIM24O15164 1050 aa21.76■■□□□ 1.07
R3HCC1-208ENST00000522012 HLA-DQB2P05538 268 aa21.76■■□□□ 1.07
R3HCC1-208ENST00000522012 CAV1Q03135 178 aa21.76■■□□□ 1.07
R3HCC1-208ENST00000522012 ITKQ08881 620 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms