RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 SEMA4DQ92854 862 aa8.63□□□□□ -1.03
CTNNA1-215ENST00000519309 TBATAQ96M53 351 aa8.63□□□□□ -1.03
CTNNA1-215ENST00000519309 ZNF396Q96N95 335 aaPredicted RBP8.63□□□□□ -1.03
CTNNA1-215ENST00000519309 MYOCQ99972 504 aa8.63□□□□□ -1.03
CTNNA1-215ENST00000519309 ARHGAP9Q9BRR9 750 aa8.63□□□□□ -1.03
CTNNA1-215ENST00000519309 SLC25A18Q9H1K4 315 aa8.63□□□□□ -1.03
CTNNA1-215ENST00000519309 OSBPL2Q9H1P3 480 aa8.63□□□□□ -1.03
CTNNA1-215ENST00000519309 ADNPQ9H2P0 1102 aa8.63□□□□□ -1.03
CTNNA1-215ENST00000519309 FZD3Q9NPG1 666 aa8.63□□□□□ -1.03
CTNNA1-215ENST00000519309 GEMIN8Q9NWZ8 242 aaKnown RBP8.63□□□□□ -1.03
CTNNA1-215ENST00000519309 DNAJC28Q9NX36 388 aa8.63□□□□□ -1.03
CTNNA1-215ENST00000519309 SEPT3Q9UH03 358 aa8.63□□□□□ -1.03
CTNNA1-215ENST00000519309 PCDHA7Q9UN72 937 aa8.63□□□□□ -1.03
CTNNA1-215ENST00000519309 ZFR2Q9UPR6 939 aaKnown RBP8.63□□□□□ -1.03
CTNNA1-215ENST00000519309 LRRK1Q38SD2 2015 aa8.63□□□□□ -1.03
CTNNA1-215ENST00000519309 SDK2Q58EX2 2172 aa8.62□□□□□ -1.03
CTNNA1-215ENST00000519309 TCAF2A6NFQ2 919 aa8.62□□□□□ -1.03
CTNNA1-215ENST00000519309 D6RAR5 112 aa8.62□□□□□ -1.03
CTNNA1-215ENST00000519309 SLC31A1O15431 190 aa8.62□□□□□ -1.03
CTNNA1-215ENST00000519309 POLR2DO15514 142 aaKnown RBP8.62□□□□□ -1.03
CTNNA1-215ENST00000519309 FYNP06241 537 aa8.62□□□□□ -1.03
CTNNA1-215ENST00000519309 CTSLP07711 333 aa8.62□□□□□ -1.03
CTNNA1-215ENST00000519309 PDGFRAP16234 1089 aa8.62□□□□□ -1.03
CTNNA1-215ENST00000519309 TACR2P21452 398 aa8.62□□□□□ -1.03
CTNNA1-215ENST00000519309 NR2F2P24468 414 aa8.62□□□□□ -1.03
CTNNA1-215ENST00000519309 SLC5A2P31639 672 aa8.62□□□□□ -1.03
CTNNA1-215ENST00000519309 MXI1P50539 228 aa8.62□□□□□ -1.03
CTNNA1-215ENST00000519309 OXCT1P55809 520 aa8.62□□□□□ -1.03
CTNNA1-215ENST00000519309 FOXK1P85037 733 aa8.62□□□□□ -1.03
CTNNA1-215ENST00000519309 SPIDRQ14159 915 aa8.62□□□□□ -1.03
CTNNA1-215ENST00000519309 NR0B2Q15466 257 aa8.62□□□□□ -1.03
CTNNA1-215ENST00000519309 RESP18Q5W5W9 173 aa8.62□□□□□ -1.03
CTNNA1-215ENST00000519309 Q6ZVU0 165 aa8.62□□□□□ -1.03
CTNNA1-215ENST00000519309 BEND5Q7L4P6 421 aa8.62□□□□□ -1.03
CTNNA1-215ENST00000519309 C14orf80Q86SX3 495 aa8.62□□□□□ -1.03
CTNNA1-215ENST00000519309 ZSCAN30Q86W11 494 aa8.62□□□□□ -1.03
CTNNA1-215ENST00000519309 CHSY1Q86X52 802 aa8.62□□□□□ -1.03
CTNNA1-215ENST00000519309 SLC35F3Q8IY50 421 aa8.62□□□□□ -1.03
CTNNA1-215ENST00000519309 LGI2Q8N0V4 545 aa8.62□□□□□ -1.03
CTNNA1-215ENST00000519309 CCAR2Q8N163 923 aaKnown RBP8.62□□□□□ -1.03
CTNNA1-215ENST00000519309 CFAP52Q8N1V2 620 aa8.62□□□□□ -1.03
CTNNA1-215ENST00000519309 SH2D3CQ8N5H7 860 aa8.62□□□□□ -1.03
CTNNA1-215ENST00000519309 UBR7Q8N806 425 aa8.62□□□□□ -1.03
CTNNA1-215ENST00000519309 ALG14Q96F25 216 aa8.62□□□□□ -1.03
CTNNA1-215ENST00000519309 EEF2KMTQ96G04 330 aa8.62□□□□□ -1.03
CTNNA1-215ENST00000519309 PRMT1Q99873 361 aaKnown RBP8.62□□□□□ -1.03
CTNNA1-215ENST00000519309 EPN3Q9H201 632 aa8.62□□□□□ -1.03
CTNNA1-215ENST00000519309 EXOC1Q9NV70 894 aa8.62□□□□□ -1.03
CTNNA1-215ENST00000519309 XPO7Q9UIA9 1087 aaKnown RBP8.62□□□□□ -1.03
CTNNA1-215ENST00000519309 HS3ST2Q9Y278 367 aa8.62□□□□□ -1.03
CTNNA1-215ENST00000519309 HS3ST3A1Q9Y663 406 aa8.62□□□□□ -1.03
CTNNA1-215ENST00000519309 SPENQ96T58 3664 aaKnown RBP8.61□□□□□ -1.03
CTNNA1-215ENST00000519309 UNC13CQ8NB66 2214 aa8.61□□□□□ -1.03
CTNNA1-215ENST00000519309 DOCK4Q8N1I0 1966 aa8.61□□□□□ -1.03
CTNNA1-215ENST00000519309 CPED1A4D0V7 1026 aa8.61□□□□□ -1.03
CTNNA1-215ENST00000519309 NVLO15381 856 aaKnown RBP8.61□□□□□ -1.03
CTNNA1-215ENST00000519309 SART1O43290 800 aaKnown RBP8.61□□□□□ -1.03
CTNNA1-215ENST00000519309 ACTN4O43707 911 aaKnown RBP8.61□□□□□ -1.03
CTNNA1-215ENST00000519309 CALUO43852 315 aaPredicted RBP8.61□□□□□ -1.03
CTNNA1-215ENST00000519309 FBXO21O94952 628 aa8.61□□□□□ -1.03
CTNNA1-215ENST00000519309 IGLV3-25P01717 112 aa8.61□□□□□ -1.03
CTNNA1-215ENST00000519309 APOEP02649 317 aa8.61□□□□□ -1.03
CTNNA1-215ENST00000519309 HSP90AA1P07900 732 aaKnown RBP8.61□□□□□ -1.03
CTNNA1-215ENST00000519309 VDRP11473 427 aa8.61□□□□□ -1.03
CTNNA1-215ENST00000519309 KRT13P13646 458 aa8.61□□□□□ -1.03
CTNNA1-215ENST00000519309 LCP1P13796 627 aa8.61□□□□□ -1.03
CTNNA1-215ENST00000519309 CCKBRP32239 447 aa8.61□□□□□ -1.03
CTNNA1-215ENST00000519309 UGT1A5P35504 534 aa8.61□□□□□ -1.03
CTNNA1-215ENST00000519309 RABIFP47224 123 aa8.61□□□□□ -1.03
CTNNA1-215ENST00000519309 ME1P48163 572 aa8.61□□□□□ -1.03
CTNNA1-215ENST00000519309 RPIAP49247 311 aa8.61□□□□□ -1.03
CTNNA1-215ENST00000519309 CLDN2P57739 230 aa8.61□□□□□ -1.03
CTNNA1-215ENST00000519309 CCDC15Q0P6D6 951 aa8.61□□□□□ -1.03
CTNNA1-215ENST00000519309 SRSF6Q13247 344 aaKnown RBP8.61□□□□□ -1.03
CTNNA1-215ENST00000519309 CUL2Q13617 745 aa8.61□□□□□ -1.03
CTNNA1-215ENST00000519309 MORC3Q14149 939 aa8.61□□□□□ -1.03
CTNNA1-215ENST00000519309 DRAP1Q14919 205 aaPredicted RBP8.61□□□□□ -1.03
CTNNA1-215ENST00000519309 TBR1Q16650 682 aa8.61□□□□□ -1.03
CTNNA1-215ENST00000519309 ZNF542PQ5EBM4 170 aa8.61□□□□□ -1.03
CTNNA1-215ENST00000519309 RAP1GAP2Q684P5 730 aa8.61□□□□□ -1.03
CTNNA1-215ENST00000519309 OR6B2Q6IFH4 312 aa8.61□□□□□ -1.03
CTNNA1-215ENST00000519309 KIAA1161Q6NSJ0 714 aa8.61□□□□□ -1.03
CTNNA1-215ENST00000519309 PMF1Q6P1K2 205 aa8.61□□□□□ -1.03
CTNNA1-215ENST00000519309 FOXR1Q6PIV2 292 aa8.61□□□□□ -1.03
CTNNA1-215ENST00000519309 CRTC1Q6UUV9 634 aa8.61□□□□□ -1.03
CTNNA1-215ENST00000519309 LCLAT1Q6UWP7 414 aa8.61□□□□□ -1.03
CTNNA1-215ENST00000519309 Q6ZSR6 202 aa8.61□□□□□ -1.03
CTNNA1-215ENST00000519309 B3GNT8Q7Z7M8 397 aa8.61□□□□□ -1.03
CTNNA1-215ENST00000519309 TAC4Q86UU9 113 aa8.61□□□□□ -1.03
CTNNA1-215ENST00000519309 FAM186BQ8IYM0 893 aa8.61□□□□□ -1.03
CTNNA1-215ENST00000519309 DENND6BQ8NEG7 585 aa8.61□□□□□ -1.03
CTNNA1-215ENST00000519309 TMIEQ8NEW7 156 aa8.61□□□□□ -1.03
CTNNA1-215ENST00000519309 ZNF564Q8TBZ8 553 aaPredicted RBP8.61□□□□□ -1.03
CTNNA1-215ENST00000519309 CLEC4CQ8WTT0 213 aa8.61□□□□□ -1.03
CTNNA1-215ENST00000519309 SLC35F5Q8WV83 523 aa8.61□□□□□ -1.03
CTNNA1-215ENST00000519309 HTR3CQ8WXA8 447 aa8.61□□□□□ -1.03
CTNNA1-215ENST00000519309 BTN2A3PQ96KV6 586 aa8.61□□□□□ -1.03
CTNNA1-215ENST00000519309 BMFQ96LC9 184 aa8.61□□□□□ -1.03
CTNNA1-215ENST00000519309 PSMG3-AS1Q96PY0 264 aa8.61□□□□□ -1.03
CTNNA1-215ENST00000519309 CCDC3Q9BQI4 270 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms