RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 IGHV4-34P06331 123 aa6.29□□□□□ -1.4
PABPC1-207ENST00000518716 TMEM191BP0C7N4 346 aa6.29□□□□□ -1.4
PABPC1-207ENST00000518716 LONP1P36776 959 aaKnown RBP6.29□□□□□ -1.4
PABPC1-207ENST00000518716 UBA7P41226 1012 aa6.29□□□□□ -1.4
PABPC1-207ENST00000518716 RHDQ02161 417 aa6.29□□□□□ -1.4
PABPC1-207ENST00000518716 DNAJC3Q13217 504 aa6.29□□□□□ -1.4
PABPC1-207ENST00000518716 GNL2Q13823 731 aaKnown RBP6.29□□□□□ -1.4
PABPC1-207ENST00000518716 ZNF234Q14588 700 aa6.29□□□□□ -1.4
PABPC1-207ENST00000518716 STARD3Q14849 445 aa6.29□□□□□ -1.4
PABPC1-207ENST00000518716 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.29□□□□□ -1.4
PABPC1-207ENST00000518716 HES3Q5TGS1 186 aa6.29□□□□□ -1.4
PABPC1-207ENST00000518716 SFMBT2Q5VUG0 894 aa6.29□□□□□ -1.4
PABPC1-207ENST00000518716 LAYNQ6UX15 382 aa6.29□□□□□ -1.4
PABPC1-207ENST00000518716 KIAA0907Q7Z7F0 614 aaPredicted RBP6.29□□□□□ -1.4
PABPC1-207ENST00000518716 WDR49Q8IV35 697 aa6.29□□□□□ -1.4
PABPC1-207ENST00000518716 FMNL3Q8IVF7 1028 aa6.29□□□□□ -1.4
PABPC1-207ENST00000518716 GALNT12Q8IXK2 581 aa6.29□□□□□ -1.4
PABPC1-207ENST00000518716 FAM217AQ8IXS0 508 aa6.29□□□□□ -1.4
PABPC1-207ENST00000518716 GPD1LQ8N335 351 aa6.29□□□□□ -1.4
PABPC1-207ENST00000518716 OR6B3Q8NGW1 331 aa6.29□□□□□ -1.4
PABPC1-207ENST00000518716 OR2T3Q8NH03 318 aa6.29□□□□□ -1.4
PABPC1-207ENST00000518716 PRCCQ92733 491 aaPredicted RBP6.29□□□□□ -1.4
PABPC1-207ENST00000518716 MRRFQ96E11 262 aaKnown RBP6.29□□□□□ -1.4
PABPC1-207ENST00000518716 CALML4Q96GE6 196 aa6.29□□□□□ -1.4
PABPC1-207ENST00000518716 ANKRD36BP1Q96IX9 119 aa6.29□□□□□ -1.4
PABPC1-207ENST00000518716 SNX25Q9H3E2 840 aa6.29□□□□□ -1.4
PABPC1-207ENST00000518716 PCIF1Q9H4Z3 704 aa6.29□□□□□ -1.4
PABPC1-207ENST00000518716 MRPL44Q9H9J2 332 aaKnown RBP6.29□□□□□ -1.4
PABPC1-207ENST00000518716 EBF2Q9HAK2 575 aa6.29□□□□□ -1.4
PABPC1-207ENST00000518716 NMUR1Q9HB89 426 aa6.29□□□□□ -1.4
PABPC1-207ENST00000518716 ATP13A1Q9HD20 1204 aa6.29□□□□□ -1.4
PABPC1-207ENST00000518716 DMAP1Q9NPF5 467 aaPredicted RBP6.29□□□□□ -1.4
PABPC1-207ENST00000518716 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.29□□□□□ -1.4
PABPC1-207ENST00000518716 PLK2Q9NYY3 685 aa6.29□□□□□ -1.4
PABPC1-207ENST00000518716 FTSJ1Q9UET6 329 aa6.29□□□□□ -1.4
PABPC1-207ENST00000518716 EXOC7Q9UPT5 735 aa6.29□□□□□ -1.4
PABPC1-207ENST00000518716 SCML2Q9UQR0 700 aa6.29□□□□□ -1.4
PABPC1-207ENST00000518716 TMA7Q9Y2S6 64 aaKnown RBP6.29□□□□□ -1.4
PABPC1-207ENST00000518716 RPS6KL1Q9Y6S9 549 aa6.29□□□□□ -1.4
PABPC1-207ENST00000518716 MYO9AB2RTY4 2548 aa6.29□□□□□ -1.4
PABPC1-207ENST00000518716 SPTBN1Q01082 2364 aaKnown RBP6.28□□□□□ -1.4
PABPC1-207ENST00000518716 A0A1W2PR77 199 aa6.28□□□□□ -1.4
PABPC1-207ENST00000518716 ZNF233A6NK53 670 aa6.28□□□□□ -1.4
PABPC1-207ENST00000518716 A8MXQ7 604 aa6.28□□□□□ -1.4
PABPC1-207ENST00000518716 WNT9AO14904 365 aa6.28□□□□□ -1.4
PABPC1-207ENST00000518716 TIMM44O43615 452 aa6.28□□□□□ -1.4
PABPC1-207ENST00000518716 SYNCRIPO60506 623 aaKnown RBP6.28□□□□□ -1.4
PABPC1-207ENST00000518716 STC2O76061 302 aa6.28□□□□□ -1.4
PABPC1-207ENST00000518716 LDOC1O95751 146 aaPredicted RBP6.28□□□□□ -1.4
PABPC1-207ENST00000518716 SEMA4FO95754 770 aa6.28□□□□□ -1.4
PABPC1-207ENST00000518716 TNNC2P02585 160 aa6.28□□□□□ -1.4
PABPC1-207ENST00000518716 KRT18P05783 430 aaKnown RBP6.28□□□□□ -1.4
PABPC1-207ENST00000518716 IRF1P10914 325 aa6.28□□□□□ -1.4
PABPC1-207ENST00000518716 C6P13671 934 aa6.28□□□□□ -1.4
PABPC1-207ENST00000518716 GAP43P17677 238 aa6.28□□□□□ -1.4
PABPC1-207ENST00000518716 HNF1BP35680 557 aa6.28□□□□□ -1.4
PABPC1-207ENST00000518716 ATP5C1P36542 298 aaKnown RBP6.28□□□□□ -1.4
PABPC1-207ENST00000518716 PEX19P40855 299 aa6.28□□□□□ -1.4
PABPC1-207ENST00000518716 RXRGP48443 463 aa6.28□□□□□ -1.4
PABPC1-207ENST00000518716 RPS14P62263 151 aaKnown RBP6.28□□□□□ -1.4
PABPC1-207ENST00000518716 RACK1P63244 317 aaKnown RBP6.28□□□□□ -1.4
PABPC1-207ENST00000518716 IL9RQ01113 521 aa6.28□□□□□ -1.4
PABPC1-207ENST00000518716 ZBTB16Q05516 673 aa6.28□□□□□ -1.4
PABPC1-207ENST00000518716 IFRD2Q12894 506 aaPredicted RBP6.28□□□□□ -1.4
PABPC1-207ENST00000518716 ILKQ13418 452 aa6.28□□□□□ -1.4
PABPC1-207ENST00000518716 EIF4HQ15056 248 aaKnown RBP6.28□□□□□ -1.4
PABPC1-207ENST00000518716 SURF1Q15526 300 aa6.28□□□□□ -1.4
PABPC1-207ENST00000518716 ZKSCAN8Q15776 578 aaPredicted RBP6.28□□□□□ -1.4
PABPC1-207ENST00000518716 SKOR2Q2VWA4 1001 aaPredicted RBP6.28□□□□□ -1.4
PABPC1-207ENST00000518716 WDR72Q3MJ13 1102 aa6.28□□□□□ -1.4
PABPC1-207ENST00000518716 PRAMEF14Q5SWL7 426 aa6.28□□□□□ -1.4
PABPC1-207ENST00000518716 GPRIN1Q7Z2K8 1008 aa6.28□□□□□ -1.4
PABPC1-207ENST00000518716 SCD5Q86SK9 330 aa6.28□□□□□ -1.4
PABPC1-207ENST00000518716 GATAD2AQ86YP4 633 aa6.28□□□□□ -1.4
PABPC1-207ENST00000518716 CRYBG2Q8N1P7 616 aa6.28□□□□□ -1.4
PABPC1-207ENST00000518716 FAM184AQ8NB25 1140 aa6.28□□□□□ -1.4
PABPC1-207ENST00000518716 ENGASEQ8NFI3 743 aa6.28□□□□□ -1.4
PABPC1-207ENST00000518716 SORCS1Q8WY21 1168 aa6.28□□□□□ -1.4
PABPC1-207ENST00000518716 SCYL1Q96KG9 808 aa6.28□□□□□ -1.4
PABPC1-207ENST00000518716 CNDP2Q96KP4 475 aaKnown RBP6.28□□□□□ -1.4
PABPC1-207ENST00000518716 ZSCAN31Q96LW9 406 aaPredicted RBP6.28□□□□□ -1.4
PABPC1-207ENST00000518716 MMS19Q96T76 1030 aa6.28□□□□□ -1.4
PABPC1-207ENST00000518716 ELF4Q99607 663 aaPredicted RBP6.28□□□□□ -1.4
PABPC1-207ENST00000518716 HNRNPABQ99729 332 aaKnown RBP6.28□□□□□ -1.4
PABPC1-207ENST00000518716 SLC2A11Q9BYW1 496 aa6.28□□□□□ -1.4
PABPC1-207ENST00000518716 SDCBP2Q9H190 292 aa6.28□□□□□ -1.4
PABPC1-207ENST00000518716 YY1AP1Q9H869 796 aa6.28□□□□□ -1.4
PABPC1-207ENST00000518716 TLR8Q9NR97 1041 aaKnown RBP6.28□□□□□ -1.4
PABPC1-207ENST00000518716 TBC1D7Q9P0N9 293 aa6.28□□□□□ -1.4
PABPC1-207ENST00000518716 AK5Q9Y6K8 562 aa6.28□□□□□ -1.4
PABPC1-207ENST00000518716 CREBBPQ92793 2442 aa6.27□□□□□ -1.41
PABPC1-207ENST00000518716 A0A1W2PPC4 97 aa6.27□□□□□ -1.41
PABPC1-207ENST00000518716 BICDL2A1A5D9 508 aa6.27□□□□□ -1.41
PABPC1-207ENST00000518716 PYCARD-AS1I3L0S3 204 aa6.27□□□□□ -1.41
PABPC1-207ENST00000518716 MDM4O15151 490 aa6.27□□□□□ -1.41
PABPC1-207ENST00000518716 TGFB1I1O43294 461 aa6.27□□□□□ -1.41
PABPC1-207ENST00000518716 ATICP31939 592 aa6.27□□□□□ -1.41
PABPC1-207ENST00000518716 ACTN2P35609 894 aa6.27□□□□□ -1.41
PABPC1-207ENST00000518716 CSRP3P50461 194 aa6.27□□□□□ -1.41
PABPC1-207ENST00000518716 CDH8P55286 799 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms