RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 TMEM217Q8N7C4 229 aa4.85□□□□□ -1.63
SQLE-202ENST00000518604 PCYOX1LQ8NBM8 494 aa4.85□□□□□ -1.63
SQLE-202ENST00000518604 MPLKIPQ8TAP9 179 aa4.85□□□□□ -1.63
SQLE-202ENST00000518604 FAR1Q8WVX9 515 aa4.85□□□□□ -1.63
SQLE-202ENST00000518604 IGFBPL1Q8WX77 278 aa4.85□□□□□ -1.63
SQLE-202ENST00000518604 RAB40AQ8WXH6 277 aa4.85□□□□□ -1.63
SQLE-202ENST00000518604 CNOT9Q92600 299 aaKnown RBP4.85□□□□□ -1.63
SQLE-202ENST00000518604 CENPIQ92674 756 aaPredicted RBP4.85□□□□□ -1.63
SQLE-202ENST00000518604 RNF125Q96EQ8 232 aa4.85□□□□□ -1.63
SQLE-202ENST00000518604 APOPT1Q96IL0 206 aa4.85□□□□□ -1.63
SQLE-202ENST00000518604 TMEM79Q9BSE2 394 aa4.85□□□□□ -1.63
SQLE-202ENST00000518604 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.85□□□□□ -1.63
SQLE-202ENST00000518604 SLC26A6Q9BXS9 759 aa4.85□□□□□ -1.63
SQLE-202ENST00000518604 MAF1Q9H063 256 aa4.85□□□□□ -1.63
SQLE-202ENST00000518604 HIPK3Q9H422 1215 aa4.85□□□□□ -1.63
SQLE-202ENST00000518604 MROH8Q9H579 483 aa4.85□□□□□ -1.63
SQLE-202ENST00000518604 PREBQ9HCU5 417 aa4.85□□□□□ -1.63
SQLE-202ENST00000518604 GRHL1Q9NZI5 618 aa4.85□□□□□ -1.63
SQLE-202ENST00000518604 SLC25A10Q9UBX3 287 aaPredicted RBP4.85□□□□□ -1.63
SQLE-202ENST00000518604 ICKQ9UPZ9 632 aa4.85□□□□□ -1.63
SQLE-202ENST00000518604 CNPY2Q9Y2B0 182 aa4.85□□□□□ -1.63
SQLE-202ENST00000518604 BTBD3Q9Y2F9 522 aa4.85□□□□□ -1.63
SQLE-202ENST00000518604 ZMYM2Q9UBW7 1377 aa4.85□□□□□ -1.63
SQLE-202ENST00000518604 C17orf113A0A1B0GUU1 675 aa4.84□□□□□ -1.63
SQLE-202ENST00000518604 TSPAN4O14817 238 aa4.84□□□□□ -1.63
SQLE-202ENST00000518604 WDHD1O75717 1129 aaPredicted RBP4.84□□□□□ -1.63
SQLE-202ENST00000518604 DDAH2O95865 285 aa4.84□□□□□ -1.63
SQLE-202ENST00000518604 KLRC2P26717 231 aa4.84□□□□□ -1.63
SQLE-202ENST00000518604 KRT9P35527 623 aa4.84□□□□□ -1.63
SQLE-202ENST00000518604 ARL1P40616 181 aaPredicted RBP4.84□□□□□ -1.63
SQLE-202ENST00000518604 NR1H2P55055 460 aa4.84□□□□□ -1.63
SQLE-202ENST00000518604 CDH15P55291 814 aa4.84□□□□□ -1.63
SQLE-202ENST00000518604 SRSF1Q07955 248 aaKnown RBP eCLIP4.84□□□□□ -1.63
SQLE-202ENST00000518604 ZNF766Q5HY98 468 aa4.84□□□□□ -1.63
SQLE-202ENST00000518604 MTX3Q5HYI7 312 aa4.84□□□□□ -1.63
SQLE-202ENST00000518604 PIK3CD-AS1Q5SR53 167 aa4.84□□□□□ -1.63
SQLE-202ENST00000518604 TTLL5Q6EMB2 1281 aa4.84□□□□□ -1.63
SQLE-202ENST00000518604 ACAD10Q6JQN1 1059 aa4.84□□□□□ -1.63
SQLE-202ENST00000518604 ZNF793Q6ZN11 406 aa4.84□□□□□ -1.63
SQLE-202ENST00000518604 KDELC2Q7Z4H8 507 aa4.84□□□□□ -1.63
SQLE-202ENST00000518604 HEATR4Q86WZ0 1026 aa4.84□□□□□ -1.63
SQLE-202ENST00000518604 TCP11L2Q8N4U5 519 aa4.84□□□□□ -1.63
SQLE-202ENST00000518604 C16orf52Q8NHV5 167 aa4.84□□□□□ -1.63
SQLE-202ENST00000518604 RFFLQ8WZ73 363 aa4.84□□□□□ -1.63
SQLE-202ENST00000518604 HSPH1Q92598 858 aa4.84□□□□□ -1.63
SQLE-202ENST00000518604 ZFYVE19Q96K21 471 aa4.84□□□□□ -1.63
SQLE-202ENST00000518604 CLSTN3Q9BQT9 956 aa4.84□□□□□ -1.63
SQLE-202ENST00000518604 TRMOQ9BU70 441 aa4.84□□□□□ -1.63
SQLE-202ENST00000518604 PAIP1Q9H074 479 aaKnown RBP4.84□□□□□ -1.63
SQLE-202ENST00000518604 EPHX3Q9H6B9 360 aa4.84□□□□□ -1.63
SQLE-202ENST00000518604 TASP1Q9H6P5 420 aa4.84□□□□□ -1.63
SQLE-202ENST00000518604 ZNF304Q9HCX3 659 aa4.84□□□□□ -1.63
SQLE-202ENST00000518604 SPAG4Q9NPE6 437 aa4.84□□□□□ -1.63
SQLE-202ENST00000518604 ZDHHC7Q9NXF8 308 aa4.84□□□□□ -1.63
SQLE-202ENST00000518604 HDAC6Q9UBN7 1215 aa4.84□□□□□ -1.63
SQLE-202ENST00000518604 SLC4A4Q9Y6R1 1079 aa4.84□□□□□ -1.63
SQLE-202ENST00000518604 TTBK1Q5TCY1 1321 aaPredicted RBP4.83□□□□□ -1.64
SQLE-202ENST00000518604 TRBV5-7A0A0A0MS05 114 aa4.83□□□□□ -1.64
SQLE-202ENST00000518604 C17orf102A2RUQ5 167 aa4.83□□□□□ -1.64
SQLE-202ENST00000518604 RNMTO43148 476 aaKnown RBP4.83□□□□□ -1.64
SQLE-202ENST00000518604 TMCC1O94876 653 aa4.83□□□□□ -1.64
SQLE-202ENST00000518604 SERPINC1P01008 464 aa4.83□□□□□ -1.64
SQLE-202ENST00000518604 HOXD9P28356 352 aaPredicted RBP4.83□□□□□ -1.64
SQLE-202ENST00000518604 PAFAH1B1P43034 410 aa4.83□□□□□ -1.64
SQLE-202ENST00000518604 MPP1Q00013 466 aa4.83□□□□□ -1.64
SQLE-202ENST00000518604 GALNT2Q10471 571 aa4.83□□□□□ -1.64
SQLE-202ENST00000518604 RPE65Q16518 533 aa4.83□□□□□ -1.64
SQLE-202ENST00000518604 COLEC12Q5KU26 742 aa4.83□□□□□ -1.64
SQLE-202ENST00000518604 SLC9C2Q5TAH2 1124 aa4.83□□□□□ -1.64
SQLE-202ENST00000518604 ZNF626Q68DY1 528 aa4.83□□□□□ -1.64
SQLE-202ENST00000518604 NAPEPLDQ6IQ20 393 aa4.83□□□□□ -1.64
SQLE-202ENST00000518604 SLC2A7Q6PXP3 512 aa4.83□□□□□ -1.64
SQLE-202ENST00000518604 WDR5BQ86VZ2 330 aa4.83□□□□□ -1.64
SQLE-202ENST00000518604 CCDC25Q86WR0 208 aa4.83□□□□□ -1.64
SQLE-202ENST00000518604 ARMC8Q8IUR7 673 aa4.83□□□□□ -1.64
SQLE-202ENST00000518604 ZDHHC23Q8IYP9 409 aa4.83□□□□□ -1.64
SQLE-202ENST00000518604 GHDCQ8N2G8 530 aa4.83□□□□□ -1.64
SQLE-202ENST00000518604 SLC25A41Q8N5S1 370 aa4.83□□□□□ -1.64
SQLE-202ENST00000518604 DPP10Q8N608 796 aa4.83□□□□□ -1.64
SQLE-202ENST00000518604 ZBTB10Q96DT7 871 aa4.83□□□□□ -1.64
SQLE-202ENST00000518604 ELP4Q96EB1 424 aa4.83□□□□□ -1.64
SQLE-202ENST00000518604 RRP36Q96EU6 259 aaKnown RBP4.83□□□□□ -1.64
SQLE-202ENST00000518604 EYA3Q99504 573 aa4.83□□□□□ -1.64
SQLE-202ENST00000518604 AGXT2Q9BYV1 514 aa4.83□□□□□ -1.64
SQLE-202ENST00000518604 LMAN2LQ9H0V9 348 aa4.83□□□□□ -1.64
SQLE-202ENST00000518604 ENTPD7Q9NQZ7 604 aa4.83□□□□□ -1.64
SQLE-202ENST00000518604 THSD1Q9NS62 852 aa4.83□□□□□ -1.64
SQLE-202ENST00000518604 ATP8A2Q9NTI2 1148 aa4.83□□□□□ -1.64
SQLE-202ENST00000518604 TMEM184CQ9NVA4 438 aa4.83□□□□□ -1.64
SQLE-202ENST00000518604 TUBA8Q9NY65 449 aaPredicted RBP4.83□□□□□ -1.64
SQLE-202ENST00000518604 ARHGAP26Q9UNA1 814 aa4.83□□□□□ -1.64
SQLE-202ENST00000518604 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.82□□□□□ -1.64
SQLE-202ENST00000518604 PER2O15055 1255 aa4.82□□□□□ -1.64
SQLE-202ENST00000518604 CBX6O95503 412 aa4.82□□□□□ -1.64
SQLE-202ENST00000518604 IL1AP01583 271 aa4.82□□□□□ -1.64
SQLE-202ENST00000518604 FGBP02675 491 aa4.82□□□□□ -1.64
SQLE-202ENST00000518604 YWHAQP27348 245 aa4.82□□□□□ -1.64
SQLE-202ENST00000518604 MMP13P45452 471 aa4.82□□□□□ -1.64
SQLE-202ENST00000518604 BLKP51451 505 aa4.82□□□□□ -1.64
SQLE-202ENST00000518604 CLCNKBP51801 687 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms