RNA–Protein interactions for RNA: ENST00000518098.1

LINCR-0001-202, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 524 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-202ENST00000518098 NTN3O00634 580 aaPredicted RBP6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 WNT9AO14904 365 aa6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 TSPAN6O43657 245 aa6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 AP1G1O43747 822 aa6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 CALUO43852 315 aaPredicted RBP6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 DTNBO60941 627 aa6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 VPS4BO75351 444 aa6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 GIMD1P0DJR0 217 aa6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 JUNDP17535 347 aa6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 ELAVL4P26378 380 aaKnown RBP6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 GJB2P29033 226 aa6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 MAT2AP31153 395 aaKnown RBP6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 PEX5P50542 639 aa6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 THOP1P52888 689 aa6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 PPP2CBP62714 309 aa6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 PPP2CAP67775 309 aa6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 SLC20A2Q08357 652 aa6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 EHHADHQ08426 723 aa6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 KLRB1Q12918 225 aa6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 CDKN3Q16667 212 aa6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 ACCSLQ4AC99 568 aa6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 MS4A13Q5J8X5 152 aa6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 PPP1R26Q5T8A7 1209 aaPredicted RBP6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 AGBL4Q5VU57 503 aa6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 SMYD5Q6GMV2 418 aa6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 SLC34A3Q8N130 599 aa6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 EFCAB3Q8N7B9 438 aa6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 ARL10Q8N8L6 244 aa6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 OR13H1Q8NG92 308 aa6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 C9orf43Q8TAL5 461 aaPredicted RBP6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 CCDC47Q96A33 483 aaKnown RBP6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 KIAA1143Q96AT1 154 aaPredicted RBP6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 ARRDC3Q96B67 414 aa6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 LMLNQ96KR4 655 aa6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 BTN2A3PQ96KV6 586 aa6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 HSFY1Q96LI6 401 aa6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 DPYSL5Q9BPU6 564 aa6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 C7orf25Q9BPX7 421 aa6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 CCDC3Q9BQI4 270 aa6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 C2orf49Q9BVC5 232 aaPredicted RBP6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 SLC17A9Q9BYT1 436 aa6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 ULBP1Q9BZM6 244 aa6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 INTS2Q9H0H0 1204 aaKnown RBP6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 EPN3Q9H201 632 aa6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 EPB41L5Q9HCM4 733 aa6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 GPR27Q9NS67 375 aa6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 WDR70Q9NW82 654 aa6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 UCKL1Q9NWZ5 548 aa6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 STIM2Q9P246 746 aa6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 PLEKHB1Q9UF11 243 aaPredicted RBP6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 VPS4AQ9UN37 437 aa6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 PCDHGA3Q9Y5H0 932 aa6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 CENPEQ02224 2701 aa6.13□□□□□ -1.43
LINCR-0001-202ENST00000518098 TEP1Q99973 2627 aaKnown RBP6.12□□□□□ -1.43
LINCR-0001-202ENST00000518098 LY6G6EA0A0G2JKS1 128 aa6.12□□□□□ -1.43
LINCR-0001-202ENST00000518098 D6RAR5 112 aa6.12□□□□□ -1.43
LINCR-0001-202ENST00000518098 HGSO14964 777 aaPredicted RBP6.12□□□□□ -1.43
LINCR-0001-202ENST00000518098 CLIC2O15247 247 aa6.12□□□□□ -1.43
LINCR-0001-202ENST00000518098 SLC31A1O15431 190 aa6.12□□□□□ -1.43
LINCR-0001-202ENST00000518098 NOBOXO60393 691 aa6.12□□□□□ -1.43
LINCR-0001-202ENST00000518098 RTN2O75298 545 aa6.12□□□□□ -1.43
LINCR-0001-202ENST00000518098 CLDN11O75508 207 aa6.12□□□□□ -1.43
LINCR-0001-202ENST00000518098 RHOBTB3O94955 611 aa6.12□□□□□ -1.43
LINCR-0001-202ENST00000518098 AGFG2O95081 481 aa6.12□□□□□ -1.43
LINCR-0001-202ENST00000518098 PCDH8O95206 1070 aa6.12□□□□□ -1.43
LINCR-0001-202ENST00000518098 VNN1O95497 513 aa6.12□□□□□ -1.43
LINCR-0001-202ENST00000518098 HLA-DRAP01903 254 aa6.12□□□□□ -1.43
LINCR-0001-202ENST00000518098 VDRP11473 427 aa6.12□□□□□ -1.43
LINCR-0001-202ENST00000518098 TBXAS1P24557 533 aaPredicted RBP6.12□□□□□ -1.43
LINCR-0001-202ENST00000518098 HTR1BP28222 390 aa6.12□□□□□ -1.43
LINCR-0001-202ENST00000518098 SUOXP51687 545 aa6.12□□□□□ -1.43
LINCR-0001-202ENST00000518098 VAMP7P51809 220 aa6.12□□□□□ -1.43
LINCR-0001-202ENST00000518098 POLE2P56282 527 aa6.12□□□□□ -1.43
LINCR-0001-202ENST00000518098 SNX16P57768 344 aa6.12□□□□□ -1.43
LINCR-0001-202ENST00000518098 RAB15P59190 212 aa6.12□□□□□ -1.43
LINCR-0001-202ENST00000518098 CNTN1Q12860 1018 aa6.12□□□□□ -1.43
LINCR-0001-202ENST00000518098 TRA2AQ13595 282 aaKnown RBP eCLIP6.12□□□□□ -1.43
LINCR-0001-202ENST00000518098 RABEP1Q15276 862 aa6.12□□□□□ -1.43
LINCR-0001-202ENST00000518098 NFIL3Q16649 462 aa6.12□□□□□ -1.43
LINCR-0001-202ENST00000518098 ZNF284Q2VY69 593 aa6.12□□□□□ -1.43
LINCR-0001-202ENST00000518098 FAM133BQ5BKY9 247 aaKnown RBP6.12□□□□□ -1.43
LINCR-0001-202ENST00000518098 KRT39Q6A163 491 aa6.12□□□□□ -1.43
LINCR-0001-202ENST00000518098 SCARA3Q6AZY7 606 aa6.12□□□□□ -1.43
LINCR-0001-202ENST00000518098 GUSBP11Q6P575 273 aa6.12□□□□□ -1.43
LINCR-0001-202ENST00000518098 ERN2Q76MJ5 926 aaKnown RBP6.12□□□□□ -1.43
LINCR-0001-202ENST00000518098 PTAR1Q7Z6K3 402 aaPredicted RBP6.12□□□□□ -1.43
LINCR-0001-202ENST00000518098 HEATR4Q86WZ0 1026 aa6.12□□□□□ -1.43
LINCR-0001-202ENST00000518098 GKN2Q86XP6 184 aa6.12□□□□□ -1.43
LINCR-0001-202ENST00000518098 DTX1Q86Y01 620 aa6.12□□□□□ -1.43
LINCR-0001-202ENST00000518098 ATP6V0D2Q8N8Y2 350 aa6.12□□□□□ -1.43
LINCR-0001-202ENST00000518098 GALNT11Q8NCW6 608 aa6.12□□□□□ -1.43
LINCR-0001-202ENST00000518098 LMX1AQ8TE12 382 aa6.12□□□□□ -1.43
LINCR-0001-202ENST00000518098 SSC4DQ8WTU2 575 aa6.12□□□□□ -1.43
LINCR-0001-202ENST00000518098 APOBEC4Q8WW27 367 aaKnown RBP6.12□□□□□ -1.43
LINCR-0001-202ENST00000518098 P2RY11Q96G91 374 aa6.12□□□□□ -1.43
LINCR-0001-202ENST00000518098 TEFMQ96QE5 360 aaKnown RBP6.12□□□□□ -1.43
LINCR-0001-202ENST00000518098 ZPBPQ9BS86 351 aa6.12□□□□□ -1.43
LINCR-0001-202ENST00000518098 SDCBP2Q9H190 292 aa6.12□□□□□ -1.43
LINCR-0001-202ENST00000518098 TRIT1Q9H3H1 467 aaKnown RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms