RNA–Protein interactions for RNA: ENST00000518074.5

SPIDR-206, Transcript of scaffold protein involved in DNA repair, human

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 2,819 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-206	ENST00000518074	KCNK12	Q9HB15	430 aa		11.22	□□□□□ -0.61
SPIDR-206	ENST00000518074	NPHS2	Q9NP85	383 aa		11.22	□□□□□ -0.61
SPIDR-206	ENST00000518074	WDR70	Q9NW82	654 aa		11.22	□□□□□ -0.61
SPIDR-206	ENST00000518074	SLC24A2	Q9UI40	661 aa		11.22	□□□□□ -0.61
SPIDR-206	ENST00000518074	CDH7	Q9ULB5	785 aa		11.22	□□□□□ -0.61
SPIDR-206	ENST00000518074	TECTA	O75443	2155 aa		11.22	□□□□□ -0.61
SPIDR-206	ENST00000518074	ZNF189	O75820	626 aa	Predicted RBP	11.21	□□□□□ -0.61
SPIDR-206	ENST00000518074	MSL3P1	P0C860	447 aa		11.21	□□□□□ -0.61
SPIDR-206	ENST00000518074	L1CAM	P32004	1257 aa		11.21	□□□□□ -0.61
SPIDR-206	ENST00000518074	GCK	P35557	465 aa		11.21	□□□□□ -0.61
SPIDR-206	ENST00000518074	CLK1	P49759	484 aa	Known RBP	11.21	□□□□□ -0.61
SPIDR-206	ENST00000518074	TAF6	P49848	677 aa		11.21	□□□□□ -0.61
SPIDR-206	ENST00000518074	MAP3K7CL	P57077	242 aa		11.21	□□□□□ -0.61
SPIDR-206	ENST00000518074	LAMB3	Q13751	1172 aa		11.21	□□□□□ -0.61
SPIDR-206	ENST00000518074	STIL	Q15468	1287 aa		11.21	□□□□□ -0.61
SPIDR-206	ENST00000518074	KLHL38	Q2WGJ6	581 aa		11.21	□□□□□ -0.61
SPIDR-206	ENST00000518074	CTXN3	Q4LDR2	81 aa		11.21	□□□□□ -0.61
SPIDR-206	ENST00000518074	MTSS1L	Q765P7	747 aa		11.21	□□□□□ -0.61
SPIDR-206	ENST00000518074	OSTM1	Q86WC4	334 aa		11.21	□□□□□ -0.61
SPIDR-206	ENST00000518074	TTC39C	Q8N584	583 aa		11.21	□□□□□ -0.61
SPIDR-206	ENST00000518074	SLC7A14	Q8TBB6	771 aa		11.21	□□□□□ -0.61
SPIDR-206	ENST00000518074	SCYL1	Q96KG9	808 aa		11.21	□□□□□ -0.61
SPIDR-206	ENST00000518074	KCTD15	Q96SI1	283 aa	Predicted RBP	11.21	□□□□□ -0.61
SPIDR-206	ENST00000518074	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	11.21	□□□□□ -0.61
SPIDR-206	ENST00000518074	MCM8	Q9UJA3	840 aa		11.21	□□□□□ -0.61
SPIDR-206	ENST00000518074	CXorf49	A8MYA2	514 aa	Predicted RBP	11.21	□□□□□ -0.62
SPIDR-206	ENST00000518074		I3L4J1	428 aa		11.21	□□□□□ -0.62
SPIDR-206	ENST00000518074	CYB561D2	O14569	222 aa		11.21	□□□□□ -0.62
SPIDR-206	ENST00000518074	ENDOD1	O94919	500 aa		11.21	□□□□□ -0.62
SPIDR-206	ENST00000518074	BCAT1	P54687	386 aa		11.21	□□□□□ -0.62
SPIDR-206	ENST00000518074	LILRA4	P59901	499 aa		11.21	□□□□□ -0.62
SPIDR-206	ENST00000518074	IRX4	P78413	519 aa		11.21	□□□□□ -0.62
SPIDR-206	ENST00000518074	AP1B1	Q10567	949 aa		11.21	□□□□□ -0.62
SPIDR-206	ENST00000518074	PLD1	Q13393	1074 aa		11.21	□□□□□ -0.62
SPIDR-206	ENST00000518074	MDH1B	Q5I0G3	518 aa		11.21	□□□□□ -0.62
SPIDR-206	ENST00000518074	MPP5	Q8N3R9	675 aa		11.21	□□□□□ -0.62
SPIDR-206	ENST00000518074	LRRC52	Q8N7C0	313 aa		11.21	□□□□□ -0.62
SPIDR-206	ENST00000518074	DENND1A	Q8TEH3	1009 aa		11.21	□□□□□ -0.62
SPIDR-206	ENST00000518074	USP33	Q8TEY7	942 aa		11.21	□□□□□ -0.62
SPIDR-206	ENST00000518074	DCAKD	Q8WVC6	231 aa		11.21	□□□□□ -0.62
SPIDR-206	ENST00000518074	SREK1	Q8WXA9	508 aa	Known RBP	11.21	□□□□□ -0.62
SPIDR-206	ENST00000518074	N4BP2L2	Q92802	583 aa	Predicted RBP	11.21	□□□□□ -0.62
SPIDR-206	ENST00000518074	KLHL29	Q96CT2	875 aa		11.21	□□□□□ -0.62
SPIDR-206	ENST00000518074	SERAC1	Q96JX3	654 aa		11.21	□□□□□ -0.62
SPIDR-206	ENST00000518074	FAM111A	Q96PZ2	611 aa		11.21	□□□□□ -0.62
SPIDR-206	ENST00000518074	KLC2	Q9H0B6	622 aa		11.21	□□□□□ -0.62
SPIDR-206	ENST00000518074	PAK5	Q9P286	719 aa		11.21	□□□□□ -0.62
SPIDR-206	ENST00000518074	WNT16	Q9UBV4	365 aa		11.21	□□□□□ -0.62
SPIDR-206	ENST00000518074	SMG5	Q9UPR3	1016 aa	Known RBP	11.21	□□□□□ -0.62
SPIDR-206	ENST00000518074	ACTL7B	Q9Y614	415 aa		11.21	□□□□□ -0.62
SPIDR-206	ENST00000518074	RASSF9	O75901	435 aa		11.2	□□□□□ -0.62
SPIDR-206	ENST00000518074	ODC1	P11926	461 aa		11.2	□□□□□ -0.62
SPIDR-206	ENST00000518074	PTPN2	P17706	415 aa		11.2	□□□□□ -0.62
SPIDR-206	ENST00000518074	PNPLA4	P41247	253 aa		11.2	□□□□□ -0.62
SPIDR-206	ENST00000518074	CLCN5	P51795	746 aa		11.2	□□□□□ -0.62
SPIDR-206	ENST00000518074	YWHAZ	P63104	245 aa	Known RBP	11.2	□□□□□ -0.62
SPIDR-206	ENST00000518074	SMARCB1	Q12824	385 aa		11.2	□□□□□ -0.62
SPIDR-206	ENST00000518074	HTR4	Q13639	388 aa		11.2	□□□□□ -0.62
SPIDR-206	ENST00000518074	KCNJ11	Q14654	390 aa		11.2	□□□□□ -0.62
SPIDR-206	ENST00000518074	ZNF449	Q6P9G9	518 aa		11.2	□□□□□ -0.62
SPIDR-206	ENST00000518074	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	11.2	□□□□□ -0.62
SPIDR-206	ENST00000518074	VSIG1	Q86XK7	387 aa		11.2	□□□□□ -0.62
SPIDR-206	ENST00000518074	TDRP	Q86YL5	185 aa		11.2	□□□□□ -0.62
SPIDR-206	ENST00000518074	B4GALNT2	Q8NHY0	566 aa		11.2	□□□□□ -0.62
SPIDR-206	ENST00000518074	ZNF75CP	Q92670	426 aa	Predicted RBP	11.2	□□□□□ -0.62
SPIDR-206	ENST00000518074	RSRC1	Q96IZ7	334 aa	Known RBP	11.2	□□□□□ -0.62
SPIDR-206	ENST00000518074	PGLYRP2	Q96PD5	576 aa		11.2	□□□□□ -0.62
SPIDR-206	ENST00000518074	CSPG4P5	Q96PW8	444 aa		11.2	□□□□□ -0.62
SPIDR-206	ENST00000518074	LRRC4	Q9HBW1	653 aa		11.2	□□□□□ -0.62
SPIDR-206	ENST00000518074	SLC2A4RG	Q9NR83	387 aa		11.2	□□□□□ -0.62
SPIDR-206	ENST00000518074	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
SPIDR-206	ENST00000518074	GDE1	Q9NZC3	331 aa		11.2	□□□□□ -0.62
SPIDR-206	ENST00000518074	WDR27	A2RRH5	827 aa		11.2	□□□□□ -0.62
SPIDR-206	ENST00000518074	ZNF197	O14709	1029 aa		11.2	□□□□□ -0.62
SPIDR-206	ENST00000518074	TYROBP	O43914	113 aa		11.2	□□□□□ -0.62
SPIDR-206	ENST00000518074	ATP6V1G1	O75348	118 aa		11.2	□□□□□ -0.62
SPIDR-206	ENST00000518074	OAS1	P00973	400 aa	Known RBP	11.2	□□□□□ -0.62
SPIDR-206	ENST00000518074	SESN2	P58004	480 aa	Predicted RBP	11.2	□□□□□ -0.62
SPIDR-206	ENST00000518074	YWHAH	Q04917	246 aa	Predicted RBP	11.2	□□□□□ -0.62
SPIDR-206	ENST00000518074	EIF2B5	Q13144	721 aa	Known RBP	11.2	□□□□□ -0.62
SPIDR-206	ENST00000518074	ADGRD1	Q6QNK2	874 aa		11.2	□□□□□ -0.62
SPIDR-206	ENST00000518074	DSTYK	Q6XUX3	929 aa		11.2	□□□□□ -0.62
SPIDR-206	ENST00000518074	GRASP	Q7Z6J2	395 aa	Predicted RBP	11.2	□□□□□ -0.62
SPIDR-206	ENST00000518074	TP53INP2	Q8IXH6	220 aa		11.2	□□□□□ -0.62
SPIDR-206	ENST00000518074	UNC5B	Q8IZJ1	945 aa		11.2	□□□□□ -0.62
SPIDR-206	ENST00000518074	B3GALNT2	Q8NCR0	500 aa		11.2	□□□□□ -0.62
SPIDR-206	ENST00000518074	ERP27	Q96DN0	273 aa		11.2	□□□□□ -0.62
SPIDR-206	ENST00000518074	IL1RAPL1	Q9NZN1	696 aa		11.2	□□□□□ -0.62
SPIDR-206	ENST00000518074	SLC17A6	Q9P2U8	582 aa		11.2	□□□□□ -0.62
SPIDR-206	ENST00000518074	TRIM49D1	C9J1S8	452 aa		11.19	□□□□□ -0.62
SPIDR-206	ENST00000518074		M0QYT0	321 aa		11.19	□□□□□ -0.62
SPIDR-206	ENST00000518074	NDC80	O14777	642 aa		11.19	□□□□□ -0.62
SPIDR-206	ENST00000518074	CAPN9	O14815	690 aa		11.19	□□□□□ -0.62
SPIDR-206	ENST00000518074	PRPF4	O43172	522 aa	Known RBP eCLIP	11.19	□□□□□ -0.62	1e-8	■■■■■ 32.2
SPIDR-206	ENST00000518074	STAU1	O95793	577 aa	Known RBP	11.19	□□□□□ -0.62
SPIDR-206	ENST00000518074	LRG1	P02750	347 aa		11.19	□□□□□ -0.62
SPIDR-206	ENST00000518074	SRF	P11831	508 aa		11.19	□□□□□ -0.62
SPIDR-206	ENST00000518074	SNX16	P57768	344 aa		11.19	□□□□□ -0.62
SPIDR-206	ENST00000518074	IFRD2	Q12894	506 aa	Predicted RBP	11.19	□□□□□ -0.62
SPIDR-206	ENST00000518074	GPR17	Q13304	367 aa		11.19	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms