RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 NME7Q9Y5B8 376 aa12.58□□□□□ -0.4
PCM1-203ENST00000517545 ZCWPW2A0A1B0GU75 182 aa12.58□□□□□ -0.4
PCM1-203ENST00000517545 COQ9O75208 318 aa12.58□□□□□ -0.4
PCM1-203ENST00000517545 CKMT2P17540 419 aa12.58□□□□□ -0.4
PCM1-203ENST00000517545 VARSP26640 1264 aaKnown RBP12.58□□□□□ -0.4
PCM1-203ENST00000517545 EPHX2P34913 555 aa12.58□□□□□ -0.4
PCM1-203ENST00000517545 AVPR1AP37288 418 aa12.58□□□□□ -0.4
PCM1-203ENST00000517545 LY6KQ17RY6 165 aa12.58□□□□□ -0.4
PCM1-203ENST00000517545 SPANXN3Q5MJ09 141 aa12.58□□□□□ -0.4
PCM1-203ENST00000517545 ELMSAN1Q6PJG2 1045 aa12.58□□□□□ -0.4
PCM1-203ENST00000517545 TMEM110Q86TL2 294 aa12.58□□□□□ -0.4
PCM1-203ENST00000517545 SNX31Q8N9S9 440 aa12.58□□□□□ -0.4
PCM1-203ENST00000517545 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.58□□□□□ -0.4
PCM1-203ENST00000517545 SLCO4A1Q96BD0 722 aa12.58□□□□□ -0.4
PCM1-203ENST00000517545 NAT9Q9BTE0 207 aa12.58□□□□□ -0.4
PCM1-203ENST00000517545 MYRFQ9Y2G1 1151 aa12.58□□□□□ -0.4
PCM1-203ENST00000517545 PCDHGA7Q9Y5G6 932 aa12.58□□□□□ -0.4
PCM1-203ENST00000517545 TADA2AO75478 443 aa12.58□□□□□ -0.4
PCM1-203ENST00000517545 PKDCCQ504Y2 493 aa12.58□□□□□ -0.4
PCM1-203ENST00000517545 SPATA6LQ8N4H0 392 aa12.58□□□□□ -0.4
PCM1-203ENST00000517545 SLC35F5Q8WV83 523 aa12.58□□□□□ -0.4
PCM1-203ENST00000517545 SREK1Q8WXA9 508 aaKnown RBP12.58□□□□□ -0.4
PCM1-203ENST00000517545 RMND5BQ96G75 393 aaPredicted RBP12.58□□□□□ -0.4
PCM1-203ENST00000517545 CPB2Q96IY4 423 aa12.58□□□□□ -0.4
PCM1-203ENST00000517545 APBA2Q99767 749 aa12.58□□□□□ -0.4
PCM1-203ENST00000517545 APOL2Q9BQE5 337 aa12.58□□□□□ -0.4
PCM1-203ENST00000517545 MRPL45Q9BRJ2 306 aaKnown RBP12.58□□□□□ -0.4
PCM1-203ENST00000517545 PDZD7Q9H5P4 517 aa12.58□□□□□ -0.4
PCM1-203ENST00000517545 EIF2B3Q9NR50 452 aaKnown RBP12.58□□□□□ -0.4
PCM1-203ENST00000517545 ADAM28Q9UKQ2 775 aa12.58□□□□□ -0.4
PCM1-203ENST00000517545 CNOT11Q9UKZ1 510 aaKnown RBP12.58□□□□□ -0.4
PCM1-203ENST00000517545 ZNF487B1APH4 448 aa12.57□□□□□ -0.4
PCM1-203ENST00000517545 TRIM38O00635 465 aa12.57□□□□□ -0.4
PCM1-203ENST00000517545 PRAMEP78395 509 aa12.57□□□□□ -0.4
PCM1-203ENST00000517545 MBTD1Q05BQ5 628 aa12.57□□□□□ -0.4
PCM1-203ENST00000517545 CBX3Q13185 183 aa12.57□□□□□ -0.4
PCM1-203ENST00000517545 SLC10A6Q3KNW5 377 aa12.57□□□□□ -0.4
PCM1-203ENST00000517545 LIPMQ5VYY2 423 aa12.57□□□□□ -0.4
PCM1-203ENST00000517545 FAM160B1Q5W0V3 765 aa12.57□□□□□ -0.4
PCM1-203ENST00000517545 PID1Q7Z2X4 250 aa12.57□□□□□ -0.4
PCM1-203ENST00000517545 SETD3Q86TU7 594 aaPredicted RBP12.57□□□□□ -0.4
PCM1-203ENST00000517545 FIBCD1Q8N539 461 aa12.57□□□□□ -0.4
PCM1-203ENST00000517545 SMYD1Q8NB12 490 aa12.57□□□□□ -0.4
PCM1-203ENST00000517545 SLC7A14Q8TBB6 771 aa12.57□□□□□ -0.4
PCM1-203ENST00000517545 C11orf84Q9BUA3 381 aaPredicted RBP12.57□□□□□ -0.4
PCM1-203ENST00000517545 PRDM12Q9H4Q4 367 aa12.57□□□□□ -0.4
PCM1-203ENST00000517545 NOL11Q9H8H0 719 aaKnown RBP12.57□□□□□ -0.4
PCM1-203ENST00000517545 GMPR2Q9P2T1 348 aaKnown RBP12.57□□□□□ -0.4
PCM1-203ENST00000517545 PCDHGA4Q9Y5G9 962 aa12.57□□□□□ -0.4
PCM1-203ENST00000517545 MPOP05164 745 aa12.57□□□□□ -0.4
PCM1-203ENST00000517545 LCP1P13796 627 aa12.57□□□□□ -0.4
PCM1-203ENST00000517545 PSME3P61289 254 aa12.57□□□□□ -0.4
PCM1-203ENST00000517545 GLRA4Q5JXX5 417 aa12.57□□□□□ -0.4
PCM1-203ENST00000517545 CERCAMQ5T4B2 595 aa12.57□□□□□ -0.4
PCM1-203ENST00000517545 HMBOX1Q6NT76 420 aa12.57□□□□□ -0.4
PCM1-203ENST00000517545 ZYG11AQ6WRX3 759 aa12.57□□□□□ -0.4
PCM1-203ENST00000517545 CLVS1Q8IUQ0 354 aaPredicted RBP12.57□□□□□ -0.4
PCM1-203ENST00000517545 HERC6Q8IVU3 1022 aa12.57□□□□□ -0.4
PCM1-203ENST00000517545 FAM47BQ8NA70 645 aa12.57□□□□□ -0.4
PCM1-203ENST00000517545 NDRG1Q92597 394 aaKnown RBP12.57□□□□□ -0.4
PCM1-203ENST00000517545 ASB9Q96DX5 294 aa12.57□□□□□ -0.4
PCM1-203ENST00000517545 ZBED3Q96IU2 234 aaPredicted RBP12.57□□□□□ -0.4
PCM1-203ENST00000517545 VPS39Q96JC1 886 aa12.57□□□□□ -0.4
PCM1-203ENST00000517545 SCYL1Q96KG9 808 aa12.57□□□□□ -0.4
PCM1-203ENST00000517545 OSBPL11Q9BXB4 747 aa12.57□□□□□ -0.4
PCM1-203ENST00000517545 C2orf40Q9H1Z8 148 aa12.57□□□□□ -0.4
PCM1-203ENST00000517545 IARS2Q9NSE4 1012 aaKnown RBP12.57□□□□□ -0.4
PCM1-203ENST00000517545 FAIMQ9NVQ4 179 aa12.57□□□□□ -0.4
PCM1-203ENST00000517545 FIS1Q9Y3D6 152 aa12.57□□□□□ -0.4
PCM1-203ENST00000517545 SYNJ2BP-COX16A0A087WUM0 186 aa12.56□□□□□ -0.4
PCM1-203ENST00000517545 IFRD2Q12894 506 aaPredicted RBP12.56□□□□□ -0.4
PCM1-203ENST00000517545 PRKAA1Q13131 559 aa12.56□□□□□ -0.4
PCM1-203ENST00000517545 MPP3Q13368 585 aa12.56□□□□□ -0.4
PCM1-203ENST00000517545 TRIM25Q14258 630 aaKnown RBP12.56□□□□□ -0.4
PCM1-203ENST00000517545 RFTN1Q14699 578 aaPredicted RBP12.56□□□□□ -0.4
PCM1-203ENST00000517545 GRM3Q14832 879 aa12.56□□□□□ -0.4
PCM1-203ENST00000517545 C7orf31Q8N865 590 aa12.56□□□□□ -0.4
PCM1-203ENST00000517545 DNAAF3Q8N9W5 541 aa12.56□□□□□ -0.4
PCM1-203ENST00000517545 KCTD4Q8WVF5 259 aa12.56□□□□□ -0.4
PCM1-203ENST00000517545 LPGAT1Q92604 370 aa12.56□□□□□ -0.4
PCM1-203ENST00000517545 CXCL16Q9H2A7 254 aa12.56□□□□□ -0.4
PCM1-203ENST00000517545 VRTNQ9H8Y1 702 aa12.56□□□□□ -0.4
PCM1-203ENST00000517545 LRRC40Q9H9A6 602 aa12.56□□□□□ -0.4
PCM1-203ENST00000517545 COX16Q9P0S2 106 aa12.56□□□□□ -0.4
PCM1-203ENST00000517545 VANGL2Q9ULK5 521 aa12.56□□□□□ -0.4
PCM1-203ENST00000517545 TNFSF13BQ9Y275 285 aa12.56□□□□□ -0.4
PCM1-203ENST00000517545 TNS1Q9HBL0 1735 aaKnown RBP12.56□□□□□ -0.4
PCM1-203ENST00000517545 GNAO1P09471 354 aa12.56□□□□□ -0.4
PCM1-203ENST00000517545 TPH1P17752 444 aa12.56□□□□□ -0.4
PCM1-203ENST00000517545 ATICP31939 592 aa12.56□□□□□ -0.4
PCM1-203ENST00000517545 PITX1P78337 314 aaPredicted RBP12.56□□□□□ -0.4
PCM1-203ENST00000517545 DPYSQ14117 519 aa12.56□□□□□ -0.4
PCM1-203ENST00000517545 ZNF460Q14592 562 aa12.56□□□□□ -0.4
PCM1-203ENST00000517545 HERC3Q15034 1050 aa12.56□□□□□ -0.4
PCM1-203ENST00000517545 DGKDQ16760 1214 aa12.56□□□□□ -0.4
PCM1-203ENST00000517545 HSDL1Q3SXM5 330 aa12.56□□□□□ -0.4
PCM1-203ENST00000517545 MAMDC4Q6UXC1 1216 aa12.56□□□□□ -0.4
PCM1-203ENST00000517545 Q6ZNX1 250 aa12.56□□□□□ -0.4
PCM1-203ENST00000517545 CCNYL1Q8N7R7 359 aa12.56□□□□□ -0.4
PCM1-203ENST00000517545 SEPT1Q8WYJ6 367 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms