RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 FGD2Q7Z6J4 655 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 SLC47A2Q86VL8 602 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 TRIM22Q8IYM9 498 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 CLYBLQ8N0X4 340 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 STAG2Q8N3U4 1231 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 ZADH2Q8N4Q0 377 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 ESX1Q8N693 406 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 BCORP1Q8N888 145 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 KIAA1958Q8N8K9 716 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 Q8N9G6 341 aaPredicted RBP3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 OR2T3Q8NH03 318 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 BICD2Q8TD16 824 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 GIPC2Q8TF65 315 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 RTP4Q96DX8 246 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 RNF31Q96EP0 1072 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 KLHDC7BQ96G42 594 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 NLRP4Q96MN2 994 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 FCRL4Q96PJ5 515 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 IL12RB2Q99665 862 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 PIP5K1AQ99755 562 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 RNF26Q9BY78 433 aaPredicted RBP3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 RBSNQ9H1K0 784 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 ZDHHC6Q9H6R6 413 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 PSTPIP2Q9H939 334 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 SENP2Q9HC62 589 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 KCNH7Q9NS40 1196 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 LMBRD1Q9NUN5 540 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 NDFIP2Q9NV92 336 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 DNAJC17Q9NVM6 304 aaKnown RBP3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 DNAJC28Q9NX36 388 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 BARHL2Q9NY43 387 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 COQ3Q9NZJ6 369 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 GCNT4Q9P109 453 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 HCN3Q9P1Z3 774 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 SUCLA2Q9P2R7 463 aaPredicted RBP3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 NOL7Q9UMY1 257 aaKnown RBP3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 ARHGAP26Q9UNA1 814 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 LIMCH1Q9UPQ0 1083 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 CA5BQ9Y2D0 317 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 CSAG2Q9Y5P2 127 aa3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 V9GY48 417 aaPredicted RBP3.31□□□□□ -1.88
SCARNA13-201ENST00000516672 STK36Q9NRP7 1315 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 MUC4Q99102 2169 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 GOLGA8AA7E2F4 631 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 GOLGA8BA8MQT2 603 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 DYNC1I1O14576 645 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 SLC9A3R1O14745 358 aaPredicted RBP3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 MEIS2O14770 477 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 CPLX1O14810 134 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 HOXC11O43248 304 aaPredicted RBP3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 KLK8O60259 260 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 SLC19A2O60779 497 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 SOX30O94993 753 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 DEXIO95424 95 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 EPHX1P07099 455 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 MED14OSP0DP75 135 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 PLCG1P19174 1290 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 UGT1A4P22310 534 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 PRKCHP24723 683 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 CASP14P31944 242 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 ADD1P35611 737 aaKnown RBP3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 HNRNPKP61978 463 aaKnown RBP eCLIP3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 RPS14P62263 151 aaKnown RBP3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 HMGN5P82970 282 aaKnown RBP3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 AKAP17AQ02040 695 aaKnown RBP3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 RBPJQ06330 500 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 AP3B2Q13367 1082 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 UGT8Q16880 541 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 ANO4Q32M45 955 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 BEAN1Q3B7T3 259 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 ZNF324BQ6AW86 544 aaPredicted RBP3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 NOTUMQ6P988 496 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 NAPRTQ6XQN6 538 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 SRGAP1Q7Z6B7 1085 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 FERMT3Q86UX7 667 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 NLRP8Q86W28 1048 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 MICU3Q86XE3 530 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 ZNF761Q86XN6 746 aaPredicted RBP3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 CCDC148Q8NFR7 591 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 OR2T34Q8NGX1 318 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 SLC22A8Q8TCC7 542 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 GPT2Q8TD30 523 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 LRRN4Q8WUT4 740 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 CUL5Q93034 780 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 CPB2Q96IY4 423 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 SCYL1Q96KG9 808 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 GBP4Q96PP9 640 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 TEFMQ96QE5 360 aaKnown RBP3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 PIGSQ96S52 555 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 CEP89Q96ST8 783 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 SEPT5Q99719 369 aaPredicted RBP3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 CTRCQ99895 268 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 LRRC2Q9BYS8 371 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 TRIM6Q9C030 488 aaPredicted RBP3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 ZMYND12Q9H0C1 365 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 C6orf50Q9HD87 102 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 KCNJ16Q9NPI9 418 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 RIC8AQ9NPQ8 531 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 ARL15Q9NXU5 204 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 HSFX1Q9UBD0 423 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms