RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 ERVK-10P10266 1014 aa15.72■□□□□ 0.11
THUMPD3-210ENST00000515662 ADRA1DP25100 572 aa15.72■□□□□ 0.11
THUMPD3-210ENST00000515662 CNTFP26441 200 aa15.72■□□□□ 0.11
THUMPD3-210ENST00000515662 RENBPP51606 427 aa15.72■□□□□ 0.11
THUMPD3-210ENST00000515662 GEMP55040 296 aa15.72■□□□□ 0.11
THUMPD3-210ENST00000515662 SEPT7Q16181 437 aaKnown RBP15.72■□□□□ 0.11
THUMPD3-210ENST00000515662 C5orf22Q49AR2 442 aa15.72■□□□□ 0.11
THUMPD3-210ENST00000515662 ANKRD20A4Q4UJ75 823 aa15.72■□□□□ 0.11
THUMPD3-210ENST00000515662 PACS1Q6VY07 963 aa15.72■□□□□ 0.11
THUMPD3-210ENST00000515662 NECAB2Q7Z6G3 386 aa15.72■□□□□ 0.11
THUMPD3-210ENST00000515662 LGI2Q8N0V4 545 aa15.72■□□□□ 0.11
THUMPD3-210ENST00000515662 IPMKQ8NFU5 416 aa15.72■□□□□ 0.11
THUMPD3-210ENST00000515662 CERS2Q96G23 380 aa15.72■□□□□ 0.11
THUMPD3-210ENST00000515662 CABS1Q96KC9 395 aa15.72■□□□□ 0.11
THUMPD3-210ENST00000515662 YME1L1Q96TA2 773 aa15.72■□□□□ 0.11
THUMPD3-210ENST00000515662 TBL1YQ9BQ87 522 aa15.72■□□□□ 0.11
THUMPD3-210ENST00000515662 CAPN7Q9Y6W3 813 aa15.72■□□□□ 0.11
THUMPD3-210ENST00000515662 ATXN2Q99700 1313 aaKnown RBP15.72■□□□□ 0.11
THUMPD3-210ENST00000515662 ZCWPW2A0A1B0GU75 182 aa15.72■□□□□ 0.11
THUMPD3-210ENST00000515662 F5H5T6 163 aa15.72■□□□□ 0.11
THUMPD3-210ENST00000515662 ATP9BO43861 1147 aa15.72■□□□□ 0.11
THUMPD3-210ENST00000515662 RAMP2O60895 175 aa15.72■□□□□ 0.11
THUMPD3-210ENST00000515662 BAIAP3O94812 1187 aa15.72■□□□□ 0.11
THUMPD3-210ENST00000515662 DNAJB2P25686 324 aa15.72■□□□□ 0.11
THUMPD3-210ENST00000515662 CCNFP41002 786 aa15.72■□□□□ 0.11
THUMPD3-210ENST00000515662 MAPKAPK2P49137 400 aa15.72■□□□□ 0.11
THUMPD3-210ENST00000515662 SF3A3Q12874 501 aaKnown RBP eCLIP15.72■□□□□ 0.11
THUMPD3-210ENST00000515662 IFT88Q13099 833 aa15.72■□□□□ 0.11
THUMPD3-210ENST00000515662 PLD1Q13393 1074 aa15.72■□□□□ 0.11
THUMPD3-210ENST00000515662 ZKSCAN8Q15776 578 aaPredicted RBP15.72■□□□□ 0.11
THUMPD3-210ENST00000515662 FAM133BQ5BKY9 247 aaKnown RBP15.72■□□□□ 0.11
THUMPD3-210ENST00000515662 RNF187Q5TA31 235 aaPredicted RBP15.72■□□□□ 0.11
THUMPD3-210ENST00000515662 MROH9Q5TGP6 573 aa15.72■□□□□ 0.11
THUMPD3-210ENST00000515662 RASSF3Q86WH2 238 aa15.72■□□□□ 0.11
THUMPD3-210ENST00000515662 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.72■□□□□ 0.11
THUMPD3-210ENST00000515662 PSMG2Q969U7 264 aa15.72■□□□□ 0.11
THUMPD3-210ENST00000515662 IL1RAPL1Q9NZN1 696 aa15.72■□□□□ 0.11
THUMPD3-210ENST00000515662 PRRG1O14668 218 aa15.71■□□□□ 0.11
THUMPD3-210ENST00000515662 SNX3O60493 162 aa15.71■□□□□ 0.11
THUMPD3-210ENST00000515662 NEBLO76041 1014 aa15.71■□□□□ 0.11
THUMPD3-210ENST00000515662 OAS1P00973 400 aaKnown RBP15.71■□□□□ 0.11
THUMPD3-210ENST00000515662 OR1E1P30953 314 aa15.71■□□□□ 0.11
THUMPD3-210ENST00000515662 SLC6A4P31645 630 aa15.71■□□□□ 0.11
THUMPD3-210ENST00000515662 ADRA1AP35348 466 aa15.71■□□□□ 0.11
THUMPD3-210ENST00000515662 HARS2P49590 506 aaKnown RBP15.71■□□□□ 0.11
THUMPD3-210ENST00000515662 TWF1Q12792 350 aa15.71■□□□□ 0.11
THUMPD3-210ENST00000515662 VEPH1Q14D04 833 aa15.71■□□□□ 0.11
THUMPD3-210ENST00000515662 POLD3Q15054 466 aaPredicted RBP15.71■□□□□ 0.11
THUMPD3-210ENST00000515662 TAF12Q16514 161 aa15.71■□□□□ 0.11
THUMPD3-210ENST00000515662 PARP15Q460N3 678 aa15.71■□□□□ 0.11
THUMPD3-210ENST00000515662 DENND5AQ6IQ26 1287 aa15.71■□□□□ 0.11
THUMPD3-210ENST00000515662 TIFABQ6ZNK6 161 aa15.71■□□□□ 0.11
THUMPD3-210ENST00000515662 OTOP2Q7RTS6 562 aa15.71■□□□□ 0.11
THUMPD3-210ENST00000515662 OTUD6BQ8N6M0 293 aa15.71■□□□□ 0.11
THUMPD3-210ENST00000515662 SPOCK2Q92563 424 aa15.71■□□□□ 0.11
THUMPD3-210ENST00000515662 FICDQ9BVA6 458 aa15.71■□□□□ 0.11
THUMPD3-210ENST00000515662 SP110Q9HB58 689 aa15.71■□□□□ 0.11
THUMPD3-210ENST00000515662 CHRAC1Q9NRG0 131 aa15.71■□□□□ 0.11
THUMPD3-210ENST00000515662 ZFATQ9P243 1243 aa15.71■□□□□ 0.11
THUMPD3-210ENST00000515662 SOX13Q9UN79 622 aa15.71■□□□□ 0.11
THUMPD3-210ENST00000515662 PSAT1Q9Y617 370 aa15.71■□□□□ 0.11
THUMPD3-210ENST00000515662 ALADP13716 330 aa15.71■□□□□ 0.11
THUMPD3-210ENST00000515662 ETV4P43268 484 aa15.71■□□□□ 0.11
THUMPD3-210ENST00000515662 SLC11A2P49281 568 aa15.71■□□□□ 0.11
THUMPD3-210ENST00000515662 YBEYP58557 167 aaPredicted RBP15.71■□□□□ 0.11
THUMPD3-210ENST00000515662 SLC10A7Q0GE19 358 aa15.71■□□□□ 0.11
THUMPD3-210ENST00000515662 SPRED3Q2MJR0 410 aa15.71■□□□□ 0.11
THUMPD3-210ENST00000515662 MARC1Q5VT66 337 aa15.71■□□□□ 0.11
THUMPD3-210ENST00000515662 TCEAL8Q8IYN2 117 aa15.71■□□□□ 0.11
THUMPD3-210ENST00000515662 TEX26Q8N6G2 289 aa15.71■□□□□ 0.11
THUMPD3-210ENST00000515662 PLD4Q96BZ4 506 aa15.71■□□□□ 0.11
THUMPD3-210ENST00000515662 MFSD3Q96ES6 412 aa15.71■□□□□ 0.11
THUMPD3-210ENST00000515662 SLC25A51Q9H1U9 297 aa15.71■□□□□ 0.11
THUMPD3-210ENST00000515662 MRPL17Q9NRX2 175 aaKnown RBP15.71■□□□□ 0.11
THUMPD3-210ENST00000515662 MKS1Q9NXB0 559 aa15.71■□□□□ 0.11
THUMPD3-210ENST00000515662 COPEO14579 308 aa15.7■□□□□ 0.1
THUMPD3-210ENST00000515662 PMPCBO75439 489 aa15.7■□□□□ 0.1
THUMPD3-210ENST00000515662 DHRS4L1P0CG22 281 aa15.7■□□□□ 0.1
THUMPD3-210ENST00000515662 HSPA8P11142 646 aaKnown RBP15.7■□□□□ 0.1
THUMPD3-210ENST00000515662 ELF1P32519 619 aa15.7■□□□□ 0.1
THUMPD3-210ENST00000515662 PPM1AP35813 382 aa15.7■□□□□ 0.1
THUMPD3-210ENST00000515662 DNAJC3Q13217 504 aa15.7■□□□□ 0.1
THUMPD3-210ENST00000515662 SERINC3Q13530 473 aa15.7■□□□□ 0.1
THUMPD3-210ENST00000515662 ITIH4Q14624 930 aa15.7■□□□□ 0.1
THUMPD3-210ENST00000515662 SMAD1Q15797 465 aaKnown RBP15.7■□□□□ 0.1
THUMPD3-210ENST00000515662 RFWD3Q6PCD5 774 aa15.7■□□□□ 0.1
THUMPD3-210ENST00000515662 CDHR3Q6ZTQ4 885 aa15.7■□□□□ 0.1
THUMPD3-210ENST00000515662 DNAJB7Q7Z6W7 309 aaPredicted RBP15.7■□□□□ 0.1
THUMPD3-210ENST00000515662 YTHDF3Q7Z739 585 aaKnown RBP15.7■□□□□ 0.1
THUMPD3-210ENST00000515662 CFAP52Q8N1V2 620 aa15.7■□□□□ 0.1
THUMPD3-210ENST00000515662 ANKS4BQ8N8V4 417 aa15.7■□□□□ 0.1
THUMPD3-210ENST00000515662 LRRC8CQ8TDW0 803 aa15.7■□□□□ 0.1
THUMPD3-210ENST00000515662 PABPC5Q96DU9 382 aaKnown RBP15.7■□□□□ 0.1
THUMPD3-210ENST00000515662 MRGPRX2Q96LB1 330 aa15.7■□□□□ 0.1
THUMPD3-210ENST00000515662 KLHL5Q96PQ7 755 aa15.7■□□□□ 0.1
THUMPD3-210ENST00000515662 SRPK1Q96SB4 655 aaKnown RBP15.7■□□□□ 0.1
THUMPD3-210ENST00000515662 KIFC1Q9BW19 673 aa15.7■□□□□ 0.1
THUMPD3-210ENST00000515662 RNF38Q9H0F5 515 aa15.7■□□□□ 0.1
THUMPD3-210ENST00000515662 NT5MQ9NPB1 228 aa15.7■□□□□ 0.1
THUMPD3-210ENST00000515662 IL23AQ9NPF7 189 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms