RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 C5orf60A6NFR6 353 aa13.31□□□□□ -0.28
PCDHA4-202ENST00000512229 PTPN4P29074 926 aa13.31□□□□□ -0.28
PCDHA4-202ENST00000512229 GLUD2P49448 558 aa13.31□□□□□ -0.28
PCDHA4-202ENST00000512229 ATXN3P54252 364 aaPredicted RBP13.31□□□□□ -0.28
PCDHA4-202ENST00000512229 LRRC36Q1X8D7 754 aa13.31□□□□□ -0.28
PCDHA4-202ENST00000512229 CLEC20AQ6ZU45 233 aa13.31□□□□□ -0.28
PCDHA4-202ENST00000512229 SLC35F5Q8WV83 523 aa13.31□□□□□ -0.28
PCDHA4-202ENST00000512229 EMID1Q96A84 441 aaPredicted RBP13.31□□□□□ -0.28
PCDHA4-202ENST00000512229 KLHL5Q96PQ7 755 aa13.31□□□□□ -0.28
PCDHA4-202ENST00000512229 TMEM109Q9BVC6 243 aa13.31□□□□□ -0.28
PCDHA4-202ENST00000512229 SDCBP2Q9H190 292 aa13.31□□□□□ -0.28
PCDHA4-202ENST00000512229 NOD2Q9HC29 1040 aa13.31□□□□□ -0.28
PCDHA4-202ENST00000512229 ASAH2Q9NR71 780 aa13.31□□□□□ -0.28
PCDHA4-202ENST00000512229 SYBUQ9NX95 663 aa13.31□□□□□ -0.28
PCDHA4-202ENST00000512229 SCNN1AP37088 669 aa13.3□□□□□ -0.28
PCDHA4-202ENST00000512229 PLK1P53350 603 aa13.3□□□□□ -0.28
PCDHA4-202ENST00000512229 ANKRD22Q5VYY1 191 aa13.3□□□□□ -0.28
PCDHA4-202ENST00000512229 C15orf39Q6ZRI6 1047 aa13.3□□□□□ -0.28
PCDHA4-202ENST00000512229 ADCK2Q7Z695 626 aa13.3□□□□□ -0.28
PCDHA4-202ENST00000512229 NPAS4Q8IUM7 802 aa13.3□□□□□ -0.28
PCDHA4-202ENST00000512229 TRIML2Q8N7C3 387 aa13.3□□□□□ -0.28
PCDHA4-202ENST00000512229 QKIQ96PU8 341 aaKnown RBP eCLIP13.3□□□□□ -0.28
PCDHA4-202ENST00000512229 CORO1BQ9BR76 489 aa13.3□□□□□ -0.28
PCDHA4-202ENST00000512229 TM6SF2Q9BZW4 377 aa13.3□□□□□ -0.28
PCDHA4-202ENST00000512229 IL1RL2Q9HB29 575 aa13.3□□□□□ -0.28
PCDHA4-202ENST00000512229 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.3□□□□□ -0.28
PCDHA4-202ENST00000512229 MT-CO1P00395 513 aa13.3□□□□□ -0.28
PCDHA4-202ENST00000512229 KRT16P08779 473 aa13.3□□□□□ -0.28
PCDHA4-202ENST00000512229 TCF4P15884 667 aa13.3□□□□□ -0.28
PCDHA4-202ENST00000512229 HNRNPH1P31943 449 aaKnown RBP13.3□□□□□ -0.28
PCDHA4-202ENST00000512229 FOXD4Q12950 439 aaPredicted RBP13.3□□□□□ -0.28
PCDHA4-202ENST00000512229 INPP5AQ14642 412 aa13.3□□□□□ -0.28
PCDHA4-202ENST00000512229 CA9Q16790 459 aa13.3□□□□□ -0.28
PCDHA4-202ENST00000512229 LRRC8BQ6P9F7 803 aa13.3□□□□□ -0.28
PCDHA4-202ENST00000512229 OTOAQ7RTW8 1153 aa13.3□□□□□ -0.28
PCDHA4-202ENST00000512229 CXorf38Q8TB03 319 aa13.3□□□□□ -0.28
PCDHA4-202ENST00000512229 EXOC2Q96KP1 924 aa13.3□□□□□ -0.28
PCDHA4-202ENST00000512229 VPS45Q9NRW7 570 aa13.3□□□□□ -0.28
PCDHA4-202ENST00000512229 THEGQ9P2T0 379 aa13.3□□□□□ -0.28
PCDHA4-202ENST00000512229 TRAV19A0A0A6YYK7 116 aa13.3□□□□□ -0.28
PCDHA4-202ENST00000512229 PEX19P40855 299 aa13.3□□□□□ -0.28
PCDHA4-202ENST00000512229 GJA9P57773 515 aa13.3□□□□□ -0.28
PCDHA4-202ENST00000512229 CDK18Q07002 472 aa13.3□□□□□ -0.28
PCDHA4-202ENST00000512229 CRYMQ14894 314 aa13.3□□□□□ -0.28
PCDHA4-202ENST00000512229 DPYSL2Q16555 572 aa13.3□□□□□ -0.28
PCDHA4-202ENST00000512229 PIWIL2Q8TC59 973 aaKnown RBP13.3□□□□□ -0.28
PCDHA4-202ENST00000512229 FUBP3Q96I24 572 aaKnown RBP eCLIP13.3□□□□□ -0.28
PCDHA4-202ENST00000512229 MLPHQ9BV36 600 aaPredicted RBP13.3□□□□□ -0.28
PCDHA4-202ENST00000512229 GPR88Q9GZN0 384 aa13.3□□□□□ -0.28
PCDHA4-202ENST00000512229 SLCO1B3Q9NPD5 702 aa13.3□□□□□ -0.28
PCDHA4-202ENST00000512229 DTLQ9NZJ0 730 aa13.3□□□□□ -0.28
PCDHA4-202ENST00000512229 TAGLN3Q9UI15 199 aa13.3□□□□□ -0.28
PCDHA4-202ENST00000512229 STARD13Q9Y3M8 1113 aa13.3□□□□□ -0.28
PCDHA4-202ENST00000512229 SLX4Q8IY92 1834 aa13.29□□□□□ -0.28
PCDHA4-202ENST00000512229 AOC2O75106 756 aa13.29□□□□□ -0.28
PCDHA4-202ENST00000512229 SERPINA4P29622 427 aa13.29□□□□□ -0.28
PCDHA4-202ENST00000512229 RABGGTBP53611 331 aa13.29□□□□□ -0.28
PCDHA4-202ENST00000512229 CREMQ03060 361 aa13.29□□□□□ -0.28
PCDHA4-202ENST00000512229 TRIP10Q15642 601 aa13.29□□□□□ -0.28
PCDHA4-202ENST00000512229 TMEM63BQ5T3F8 832 aa13.29□□□□□ -0.28
PCDHA4-202ENST00000512229 ANKS6Q68DC2 871 aa13.29□□□□□ -0.28
PCDHA4-202ENST00000512229 CFAP52Q8N1V2 620 aa13.29□□□□□ -0.28
PCDHA4-202ENST00000512229 ZNF557Q8N988 423 aaPredicted RBP13.29□□□□□ -0.28
PCDHA4-202ENST00000512229 SLC44A1Q8WWI5 657 aa13.29□□□□□ -0.28
PCDHA4-202ENST00000512229 FBXW11Q9UKB1 542 aa13.29□□□□□ -0.28
PCDHA4-202ENST00000512229 FAM50BQ9Y247 325 aa13.29□□□□□ -0.28
PCDHA4-202ENST00000512229 LRP5O75197 1615 aa13.29□□□□□ -0.28
PCDHA4-202ENST00000512229 GCATO75600 419 aa13.29□□□□□ -0.28
PCDHA4-202ENST00000512229 YBEYP58557 167 aaPredicted RBP13.29□□□□□ -0.28
PCDHA4-202ENST00000512229 OGDHQ02218 1023 aa13.29□□□□□ -0.28
PCDHA4-202ENST00000512229 BST1Q10588 318 aa13.29□□□□□ -0.28
PCDHA4-202ENST00000512229 CERCAMQ5T4B2 595 aa13.29□□□□□ -0.28
PCDHA4-202ENST00000512229 SYPL2Q5VXT5 272 aa13.29□□□□□ -0.28
PCDHA4-202ENST00000512229 ZDHHC24Q6UX98 284 aa13.29□□□□□ -0.28
PCDHA4-202ENST00000512229 SAPCD2Q86UD0 394 aa13.29□□□□□ -0.28
PCDHA4-202ENST00000512229 FBXO39Q8N4B4 442 aa13.29□□□□□ -0.28
PCDHA4-202ENST00000512229 SCAMP5Q8TAC9 235 aa13.29□□□□□ -0.28
PCDHA4-202ENST00000512229 SEZ6LQ9BYH1 1024 aa13.29□□□□□ -0.28
PCDHA4-202ENST00000512229 VRTNQ9H8Y1 702 aa13.29□□□□□ -0.28
PCDHA4-202ENST00000512229 CLUHO75153 1309 aa13.29□□□□□ -0.28
PCDHA4-202ENST00000512229 PRPF4O43172 522 aaKnown RBP eCLIP13.29□□□□□ -0.28
PCDHA4-202ENST00000512229 TBL1XO60907 577 aa13.29□□□□□ -0.28
PCDHA4-202ENST00000512229 EFCAB14O75071 495 aa13.29□□□□□ -0.28
PCDHA4-202ENST00000512229 GNRH1P01148 92 aa13.29□□□□□ -0.28
PCDHA4-202ENST00000512229 PIRTP0C851 137 aa13.29□□□□□ -0.28
PCDHA4-202ENST00000512229 POLR2LP62875 67 aaKnown RBP13.29□□□□□ -0.28
PCDHA4-202ENST00000512229 CTBP1Q13363 440 aa13.29□□□□□ -0.28
PCDHA4-202ENST00000512229 FNBP1LQ5T0N5 605 aa13.29□□□□□ -0.28
PCDHA4-202ENST00000512229 PACS1Q6VY07 963 aa13.29□□□□□ -0.28
PCDHA4-202ENST00000512229 SLCO2A1Q92959 643 aa13.29□□□□□ -0.28
PCDHA4-202ENST00000512229 OXNAD1Q96HP4 312 aaPredicted RBP13.29□□□□□ -0.28
PCDHA4-202ENST00000512229 CATSPERZQ9NTU4 200 aa13.29□□□□□ -0.28
PCDHA4-202ENST00000512229 PRR23AA6NEV1 266 aa13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 CNMDO75829 334 aa13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 CXCL14O95715 111 aa13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 STAU1O95793 577 aaKnown RBP13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 RHOQP17081 205 aa13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 ITGB6P18564 788 aa13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 LAG3P18627 525 aa13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 DRD4P21917 467 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms