RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 GFM2Q969S9 779 aaKnown RBP5.15□□□□□ -1.59
TRAPPC11-208ENST00000511955 SLC22A18Q96BI1 424 aa5.15□□□□□ -1.59
TRAPPC11-208ENST00000511955 ERO1AQ96HE7 468 aa5.15□□□□□ -1.59
TRAPPC11-208ENST00000511955 KCNJ15Q99712 375 aa5.15□□□□□ -1.59
TRAPPC11-208ENST00000511955 BTBD2Q9BX70 525 aa5.15□□□□□ -1.59
TRAPPC11-208ENST00000511955 SLC5A7Q9GZV3 580 aa5.15□□□□□ -1.59
TRAPPC11-208ENST00000511955 KCNH6Q9H252 994 aa5.15□□□□□ -1.59
TRAPPC11-208ENST00000511955 KCNF1Q9H3M0 494 aa5.15□□□□□ -1.59
TRAPPC11-208ENST00000511955 AZI2Q9H6S1 392 aa5.15□□□□□ -1.59
TRAPPC11-208ENST00000511955 SH2B1Q9NRF2 756 aaPredicted RBP5.15□□□□□ -1.59
TRAPPC11-208ENST00000511955 SLC39A1Q9NY26 324 aa5.15□□□□□ -1.59
TRAPPC11-208ENST00000511955 APEX2Q9UBZ4 518 aa5.15□□□□□ -1.59
TRAPPC11-208ENST00000511955 RABGEF1Q9UJ41 708 aa5.15□□□□□ -1.59
TRAPPC11-208ENST00000511955 PHIPQ8WWQ0 1821 aa5.15□□□□□ -1.59
TRAPPC11-208ENST00000511955 PHLPP2Q6ZVD8 1323 aa5.15□□□□□ -1.59
TRAPPC11-208ENST00000511955 A0A1W2PPC4 97 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 TTC26A0AVF1 554 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 TARSL2A2RTX5 802 aaKnown RBP5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 LRRD1A4D1F6 860 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 GOLGA8IPA6NC78 632 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 ZNF879B4DU55 563 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 ATP2A1O14983 1001 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 CACNG3O60359 315 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 CRTAPO75718 401 aaPredicted RBP5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 KCNK5O95279 499 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 HLA-DRAP01903 254 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 RPLP1P05386 114 aaKnown RBP5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 NR2F2P24468 414 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 HNRNPH1P31943 449 aaKnown RBP5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 PRKCIP41743 596 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 STAT2P52630 851 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 POLGP54098 1239 aaPredicted RBP5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 EMP3P54852 163 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 POLR2GP62487 172 aaKnown RBP eCLIP5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 VAMP2P63027 116 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 DLG4P78352 724 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 SP3Q02447 781 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 GPS1Q13098 491 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 PAK1Q13153 545 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 DDX39BQ13838 428 aaKnown RBP5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 DAG1Q14118 895 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 GIT2Q14161 759 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 GAS6Q14393 721 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 PTPAQ15257 358 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 AANATQ16613 207 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 DGKDQ16760 1214 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 RTN1Q16799 776 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 PRAMEF14Q5SWL7 426 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 NFRKBQ6P4R8 1299 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 DEGS2Q6QHC5 323 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 BLOC1S3Q6QNY0 202 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 CATSPERGQ6ZRH7 1159 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 Q6ZUG5 572 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 ARMC8Q8IUR7 673 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 LINC00346Q8IVM7 164 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 TRIM59Q8IWR1 403 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 SRRM1Q8IYB3 904 aaKnown RBP5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 AGGF1Q8N302 714 aaeCLIP5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 MPP5Q8N3R9 675 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 C1orf127Q8N9H9 656 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 OR6S1Q8NH40 331 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 CSGALNACT1Q8TDX6 532 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 LMBR1Q8WVP7 490 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 SLC13A3Q8WWT9 602 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 LPAR1Q92633 364 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 HDAC11Q96DB2 347 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 VWCEQ96DN2 955 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 BBS2Q9BXC9 721 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 CLK4Q9HAZ1 481 aaKnown RBP5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 NRBP2Q9NSY0 501 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 DNAJC28Q9NX36 388 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 SMPD3Q9NY59 655 aaPredicted RBP5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 BTBD7Q9P203 1132 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 COQ6Q9Y2Z9 468 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 CYP46A1Q9Y6A2 500 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 PLIN4Q96Q06 1357 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 KLF18A0A0U1RQI7 1052 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 A0A1B0GWJ7 208 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 PTPDC1A2A3K4 754 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 TMEM221A6NGB7 291 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 PER2O15055 1255 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 WDR46O15213 610 aaKnown RBP5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 CYTH3O43739 400 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 CBFA2T3O75081 653 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 DNAJB6O75190 326 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 NDUFS2O75306 463 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 CLN5O75503 358 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 C22orf31O95567 290 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 GNA14O95837 355 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 RETP07949 1114 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 MMP2P08253 660 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 CYC1P08574 325 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 PNMA6AP0CW24 399 aaPredicted RBP5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 RALAP11233 206 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 CPT2P23786 658 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 GGT5P36269 586 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 CBX5P45973 191 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 STARP49675 285 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 GATMP50440 423 aa5.14□□□□□ -1.59
TRAPPC11-208ENST00000511955 UBE2HP62256 183 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms