RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 HNRNPA2B1P22626 353 aaKnown RBP19.52■□□□□ 0.72
HMGCS1-206ENST00000511774 AKT2P31751 481 aa19.52■□□□□ 0.72
HMGCS1-206ENST00000511774 SULT2A1Q06520 285 aa19.52■□□□□ 0.72
HMGCS1-206ENST00000511774 EIF4EBP2Q13542 120 aaPredicted RBP19.52■□□□□ 0.72
HMGCS1-206ENST00000511774 TMEM259Q4ZIN3 620 aa19.52■□□□□ 0.72
HMGCS1-206ENST00000511774 SMYD4Q8IYR2 804 aaPredicted RBP19.52■□□□□ 0.72
HMGCS1-206ENST00000511774 ERCC4Q92889 916 aaPredicted RBP19.52■□□□□ 0.72
HMGCS1-206ENST00000511774 IFT43Q96FT9 208 aa19.52■□□□□ 0.72
HMGCS1-206ENST00000511774 HSFY1Q96LI6 401 aa19.52■□□□□ 0.72
HMGCS1-206ENST00000511774 CCNL2Q96S94 520 aaPredicted RBP19.52■□□□□ 0.72
HMGCS1-206ENST00000511774 FEM1AQ9BSK4 669 aa19.52■□□□□ 0.72
HMGCS1-206ENST00000511774 FAM117AQ9C073 453 aa19.52■□□□□ 0.72
HMGCS1-206ENST00000511774 KIAA1257Q9ULG3 409 aa19.52■□□□□ 0.72
HMGCS1-206ENST00000511774 HEMK1Q9Y5R4 338 aaPredicted RBP19.52■□□□□ 0.72
HMGCS1-206ENST00000511774 UNC79Q9P2D8 2635 aa19.52■□□□□ 0.71
HMGCS1-206ENST00000511774 ALOX15BO15296 676 aa19.51■□□□□ 0.71
HMGCS1-206ENST00000511774 NOBOXO60393 691 aa19.51■□□□□ 0.71
HMGCS1-206ENST00000511774 FBXO21O94952 628 aa19.51■□□□□ 0.71
HMGCS1-206ENST00000511774 TNFSF15O95150 251 aa19.51■□□□□ 0.71
HMGCS1-206ENST00000511774 RPL34P49207 117 aaKnown RBP19.51■□□□□ 0.71
HMGCS1-206ENST00000511774 DPYDQ12882 1025 aa19.51■□□□□ 0.71
HMGCS1-206ENST00000511774 DEFB133Q30KQ1 61 aa19.51■□□□□ 0.71
HMGCS1-206ENST00000511774 ZCCHC8Q6NZY4 707 aaKnown RBP19.51■□□□□ 0.71
HMGCS1-206ENST00000511774 RBM44Q6ZP01 1051 aaKnown RBP19.51■□□□□ 0.71
HMGCS1-206ENST00000511774 PTAR1Q7Z6K3 402 aaPredicted RBP19.51■□□□□ 0.71
HMGCS1-206ENST00000511774 SH2D3CQ8N5H7 860 aa19.51■□□□□ 0.71
HMGCS1-206ENST00000511774 CHST14Q8NCH0 376 aa19.51■□□□□ 0.71
HMGCS1-206ENST00000511774 EXTL1Q92935 676 aa19.51■□□□□ 0.71
HMGCS1-206ENST00000511774 FAM149B1Q96BN6 582 aa19.51■□□□□ 0.71
HMGCS1-206ENST00000511774 BTN2A3PQ96KV6 586 aa19.51■□□□□ 0.71
HMGCS1-206ENST00000511774 DUSP23Q9BVJ7 150 aa19.51■□□□□ 0.71
HMGCS1-206ENST00000511774 HPSEQ9Y251 543 aa19.51■□□□□ 0.71
HMGCS1-206ENST00000511774 EME2A4GXA9 379 aaPredicted RBP19.5■□□□□ 0.71
HMGCS1-206ENST00000511774 TCAF2A6NFQ2 919 aa19.5■□□□□ 0.71
HMGCS1-206ENST00000511774 NEMP2A6NFY4 417 aa19.5■□□□□ 0.71
HMGCS1-206ENST00000511774 F5H5T6 163 aa19.5■□□□□ 0.71
HMGCS1-206ENST00000511774 K7ERQ8 282 aa19.5■□□□□ 0.71
HMGCS1-206ENST00000511774 APOEP02649 317 aa19.5■□□□□ 0.71
HMGCS1-206ENST00000511774 CSF2P04141 144 aa19.5■□□□□ 0.71
HMGCS1-206ENST00000511774 PAEPP09466 180 aa19.5■□□□□ 0.71
HMGCS1-206ENST00000511774 NME1P15531 152 aaKnown RBP19.5■□□□□ 0.71
HMGCS1-206ENST00000511774 ZNF18P17022 549 aa19.5■□□□□ 0.71
HMGCS1-206ENST00000511774 HNRNPKP61978 463 aaKnown RBP eCLIP19.5■□□□□ 0.71
HMGCS1-206ENST00000511774 TGIF1Q15583 401 aa19.5■□□□□ 0.71
HMGCS1-206ENST00000511774 EDRF1Q3B7T1 1238 aa19.5■□□□□ 0.71
HMGCS1-206ENST00000511774 DCAF17Q5H9S7 520 aaPredicted RBP19.5■□□□□ 0.71
HMGCS1-206ENST00000511774 FBXL22Q6P050 247 aa19.5■□□□□ 0.71
HMGCS1-206ENST00000511774 NEK5Q6P3R8 708 aa19.5■□□□□ 0.71
HMGCS1-206ENST00000511774 OR2A12Q8NGT7 310 aa19.5■□□□□ 0.71
HMGCS1-206ENST00000511774 CCDC97Q96F63 343 aaPredicted RBP19.5■□□□□ 0.71
HMGCS1-206ENST00000511774 RCOR1Q9UKL0 485 aa19.5■□□□□ 0.71
HMGCS1-206ENST00000511774 ATXN7L1Q9ULK2 861 aaPredicted RBP19.5■□□□□ 0.71
HMGCS1-206ENST00000511774 NOTCH2Q04721 2471 aa19.49■□□□□ 0.71
HMGCS1-206ENST00000511774 KCNU1A8MYU2 1149 aa19.49■□□□□ 0.71
HMGCS1-206ENST00000511774 KPNA3O00505 521 aaPredicted RBP19.49■□□□□ 0.71
HMGCS1-206ENST00000511774 SPINT1O43278 529 aa19.49■□□□□ 0.71
HMGCS1-206ENST00000511774 SUV39H1O43463 412 aa19.49■□□□□ 0.71
HMGCS1-206ENST00000511774 TRUB2O95900 331 aaKnown RBP19.49■□□□□ 0.71
HMGCS1-206ENST00000511774 SRCP12931 536 aa19.49■□□□□ 0.71
HMGCS1-206ENST00000511774 GGCXP38435 758 aa19.49■□□□□ 0.71
HMGCS1-206ENST00000511774 YWHAEP62258 255 aaKnown RBP19.49■□□□□ 0.71
HMGCS1-206ENST00000511774 DNM1Q05193 864 aaKnown RBP19.49■□□□□ 0.71
HMGCS1-206ENST00000511774 TCERG1LQ5VWI1 586 aa19.49■□□□□ 0.71
HMGCS1-206ENST00000511774 WDR36Q8NI36 951 aaKnown RBP19.49■□□□□ 0.71
HMGCS1-206ENST00000511774 PSMB7Q99436 277 aa19.49■□□□□ 0.71
HMGCS1-206ENST00000511774 TCEAL2Q9H3H9 227 aaPredicted RBP19.49■□□□□ 0.71
HMGCS1-206ENST00000511774 SLC25A13Q9UJS0 675 aa19.49■□□□□ 0.71
HMGCS1-206ENST00000511774 PNMA8BQ9ULN7 279 aaPredicted RBP19.49■□□□□ 0.71
HMGCS1-206ENST00000511774 PCDHB4Q9Y5E5 795 aa19.49■□□□□ 0.71
HMGCS1-206ENST00000511774 SPTY2D1-AS1A0A0U1RR47 76 aa19.48■□□□□ 0.71
HMGCS1-206ENST00000511774 A6NNZ2 444 aa19.48■□□□□ 0.71
HMGCS1-206ENST00000511774 MUSKO15146 869 aa19.48■□□□□ 0.71
HMGCS1-206ENST00000511774 SMAD6O43541 496 aaKnown RBP19.48■□□□□ 0.71
HMGCS1-206ENST00000511774 STX10O60499 249 aa19.48■□□□□ 0.71
HMGCS1-206ENST00000511774 SNAP91O60641 907 aa19.48■□□□□ 0.71
HMGCS1-206ENST00000511774 PCDH8O95206 1070 aa19.48■□□□□ 0.71
HMGCS1-206ENST00000511774 F13A1P00488 732 aa19.48■□□□□ 0.71
HMGCS1-206ENST00000511774 MYL1P05976 194 aa19.48■□□□□ 0.71
HMGCS1-206ENST00000511774 FAM87AP0C7U9 286 aa19.48■□□□□ 0.71
HMGCS1-206ENST00000511774 EPB41P11171 864 aaKnown RBP19.48■□□□□ 0.71
HMGCS1-206ENST00000511774 CHRNA3P32297 505 aa19.48■□□□□ 0.71
HMGCS1-206ENST00000511774 GPD2P43304 727 aa19.48■□□□□ 0.71
HMGCS1-206ENST00000511774 NUCB2P80303 420 aa19.48■□□□□ 0.71
HMGCS1-206ENST00000511774 PKP1Q13835 747 aa19.48■□□□□ 0.71
HMGCS1-206ENST00000511774 TAF5Q15542 800 aa19.48■□□□□ 0.71
HMGCS1-206ENST00000511774 B3GNT8Q7Z7M8 397 aa19.48■□□□□ 0.71
HMGCS1-206ENST00000511774 SLC35F3Q8IY50 421 aa19.48■□□□□ 0.71
HMGCS1-206ENST00000511774 GRAMD1AQ96CP6 724 aa19.48■□□□□ 0.71
HMGCS1-206ENST00000511774 AQP9O43315 295 aa19.47■□□□□ 0.71
HMGCS1-206ENST00000511774 GCATO75600 419 aa19.47■□□□□ 0.71
HMGCS1-206ENST00000511774 ITGA2BP08514 1039 aa19.47■□□□□ 0.71
HMGCS1-206ENST00000511774 ZSCAN22P10073 491 aaPredicted RBP19.47■□□□□ 0.71
HMGCS1-206ENST00000511774 RRM1P23921 792 aa19.47■□□□□ 0.71
HMGCS1-206ENST00000511774 EIF2B5Q13144 721 aaKnown RBP19.47■□□□□ 0.71
HMGCS1-206ENST00000511774 DENND1BQ6P3S1 775 aa19.47■□□□□ 0.71
HMGCS1-206ENST00000511774 KYAT3Q6YP21 454 aaKnown RBP19.47■□□□□ 0.71
HMGCS1-206ENST00000511774 ATG14Q6ZNE5 492 aa19.47■□□□□ 0.71
HMGCS1-206ENST00000511774 BEND5Q7L4P6 421 aa19.47■□□□□ 0.71
HMGCS1-206ENST00000511774 C14orf80Q86SX3 495 aa19.47■□□□□ 0.71
HMGCS1-206ENST00000511774 RBFAQ8N0V3 343 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms