RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 PPP1R13BQ96KQ4 1090 aa13.72□□□□□ -0.21
DDX41-210ENST00000509576 UBL7Q96S82 380 aaPredicted RBP13.72□□□□□ -0.21
DDX41-210ENST00000509576 NPY6RQ99463 290 aa13.72□□□□□ -0.21
DDX41-210ENST00000509576 KDM4CQ9H3R0 1056 aa13.72□□□□□ -0.21
DDX41-210ENST00000509576 ASNSD1Q9NWL6 643 aa13.72□□□□□ -0.21
DDX41-210ENST00000509576 VPS51Q9UID3 782 aa13.72□□□□□ -0.21
DDX41-210ENST00000509576 KLF15Q9UIH9 416 aa13.72□□□□□ -0.21
DDX41-210ENST00000509576 PNMA8BQ9ULN7 279 aaPredicted RBP13.72□□□□□ -0.21
DDX41-210ENST00000509576 PCDHGC3Q9UN70 934 aa13.72□□□□□ -0.21
DDX41-210ENST00000509576 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.72□□□□□ -0.21
DDX41-210ENST00000509576 AK5Q9Y6K8 562 aa13.72□□□□□ -0.21
DDX41-210ENST00000509576 ANKRD36A6QL64 1941 aa13.71□□□□□ -0.21
DDX41-210ENST00000509576 PMS2P1A4D2B8 440 aa13.71□□□□□ -0.21
DDX41-210ENST00000509576 ATXN7O15265 892 aaPredicted RBP13.71□□□□□ -0.21
DDX41-210ENST00000509576 BNIP3LO60238 219 aa13.71□□□□□ -0.21
DDX41-210ENST00000509576 DAB1O75553 588 aa13.71□□□□□ -0.21
DDX41-210ENST00000509576 CD160O95971 181 aa13.71□□□□□ -0.21
DDX41-210ENST00000509576 THEGLP0DJG4 465 aa13.71□□□□□ -0.21
DDX41-210ENST00000509576 CCR1P32246 355 aa13.71□□□□□ -0.21
DDX41-210ENST00000509576 CLCN1P35523 988 aa13.71□□□□□ -0.21
DDX41-210ENST00000509576 HNF1BP35680 557 aa13.71□□□□□ -0.21
DDX41-210ENST00000509576 CDK17Q00537 523 aa13.71□□□□□ -0.21
DDX41-210ENST00000509576 SULT2A1Q06520 285 aa13.71□□□□□ -0.21
DDX41-210ENST00000509576 PAK1Q13153 545 aa13.71□□□□□ -0.21
DDX41-210ENST00000509576 ACCSLQ4AC99 568 aa13.71□□□□□ -0.21
DDX41-210ENST00000509576 TMEM259Q4ZIN3 620 aa13.71□□□□□ -0.21
DDX41-210ENST00000509576 ZNF542PQ5EBM4 170 aa13.71□□□□□ -0.21
DDX41-210ENST00000509576 TTC39BQ5VTQ0 682 aaPredicted RBP13.71□□□□□ -0.21
DDX41-210ENST00000509576 SLC26A9Q7LBE3 791 aa13.71□□□□□ -0.21
DDX41-210ENST00000509576 SLC47A2Q86VL8 602 aa13.71□□□□□ -0.21
DDX41-210ENST00000509576 SPACA3Q8IXA5 215 aa13.71□□□□□ -0.21
DDX41-210ENST00000509576 OR7D4Q8NG98 312 aa13.71□□□□□ -0.21
DDX41-210ENST00000509576 OR4C6Q8NH72 309 aa13.71□□□□□ -0.21
DDX41-210ENST00000509576 SLC39A7Q92504 469 aa13.71□□□□□ -0.21
DDX41-210ENST00000509576 NT5C3BQ969T7 300 aa13.71□□□□□ -0.21
DDX41-210ENST00000509576 BMFQ96LC9 184 aa13.71□□□□□ -0.21
DDX41-210ENST00000509576 FCRL3Q96P31 734 aaPredicted RBP13.71□□□□□ -0.21
DDX41-210ENST00000509576 SIK2Q9H0K1 926 aa13.71□□□□□ -0.21
DDX41-210ENST00000509576 TNKS2Q9H2K2 1166 aa13.71□□□□□ -0.21
DDX41-210ENST00000509576 ARHGEF38Q9NXL2 777 aa13.71□□□□□ -0.21
DDX41-210ENST00000509576 MPP6Q9NZW5 540 aa13.71□□□□□ -0.21
DDX41-210ENST00000509576 CLCA2Q9UQC9 943 aa13.71□□□□□ -0.21
DDX41-210ENST00000509576 DMTF1Q9Y222 760 aa13.71□□□□□ -0.21
DDX41-210ENST00000509576 WASF2Q9Y6W5 498 aa13.71□□□□□ -0.21
DDX41-210ENST00000509576 POM121BA6NF01 834 aa13.7□□□□□ -0.22
DDX41-210ENST00000509576 PRAMEF26H0Y7S4 382 aa13.7□□□□□ -0.22
DDX41-210ENST00000509576 M0QYT0 321 aa13.7□□□□□ -0.22
DDX41-210ENST00000509576 ALOX15BO15296 676 aa13.7□□□□□ -0.22
DDX41-210ENST00000509576 FFAR2O15552 330 aa13.7□□□□□ -0.22
DDX41-210ENST00000509576 SPINT1O43278 529 aa13.7□□□□□ -0.22
DDX41-210ENST00000509576 HSF2BPO75031 334 aa13.7□□□□□ -0.22
DDX41-210ENST00000509576 ZMPSTE24O75844 475 aa13.7□□□□□ -0.22
DDX41-210ENST00000509576 PIAS2O75928 621 aa13.7□□□□□ -0.22
DDX41-210ENST00000509576 NEBLO76041 1014 aa13.7□□□□□ -0.22
DDX41-210ENST00000509576 GLI1P08151 1106 aa13.7□□□□□ -0.22
DDX41-210ENST00000509576 PON1P27169 355 aa13.7□□□□□ -0.22
DDX41-210ENST00000509576 CHRNA3P32297 505 aa13.7□□□□□ -0.22
DDX41-210ENST00000509576 CXCR3P49682 368 aa13.7□□□□□ -0.22
DDX41-210ENST00000509576 CCDC173Q0VFZ6 552 aa13.7□□□□□ -0.22
DDX41-210ENST00000509576 KCNMA1Q12791 1236 aa13.7□□□□□ -0.22
DDX41-210ENST00000509576 SFSWAPQ12872 951 aaKnown RBP13.7□□□□□ -0.22
DDX41-210ENST00000509576 ZNF211Q13398 564 aaPredicted RBP13.7□□□□□ -0.22
DDX41-210ENST00000509576 STIM1Q13586 685 aa13.7□□□□□ -0.22
DDX41-210ENST00000509576 TBC1D25Q3MII6 688 aa13.7□□□□□ -0.22
DDX41-210ENST00000509576 C2CD6Q53TS8 623 aa13.7□□□□□ -0.22
DDX41-210ENST00000509576 RABGAP1LQ5R372 815 aa13.7□□□□□ -0.22
DDX41-210ENST00000509576 OR6B2Q6IFH4 312 aa13.7□□□□□ -0.22
DDX41-210ENST00000509576 TMC6Q7Z403 805 aa13.7□□□□□ -0.22
DDX41-210ENST00000509576 BNIPLQ7Z465 357 aa13.7□□□□□ -0.22
DDX41-210ENST00000509576 ABI3BPQ7Z7G0 1075 aa13.7□□□□□ -0.22
DDX41-210ENST00000509576 CCDC117Q8IWD4 279 aaPredicted RBP13.7□□□□□ -0.22
DDX41-210ENST00000509576 CACTIN-AS1Q8N1I8 211 aa13.7□□□□□ -0.22
DDX41-210ENST00000509576 OXR1Q8N573 874 aa13.7□□□□□ -0.22
DDX41-210ENST00000509576 SKA1Q96BD8 255 aa13.7□□□□□ -0.22
DDX41-210ENST00000509576 HIC2Q96JB3 615 aa13.7□□□□□ -0.22
DDX41-210ENST00000509576 MAGEB5Q9BZ81 275 aa13.7□□□□□ -0.22
DDX41-210ENST00000509576 PREBQ9HCU5 417 aa13.7□□□□□ -0.22
DDX41-210ENST00000509576 APEX2Q9UBZ4 518 aa13.7□□□□□ -0.22
DDX41-210ENST00000509576 SLC25A13Q9UJS0 675 aa13.7□□□□□ -0.22
DDX41-210ENST00000509576 VPS28Q9UK41 221 aa13.7□□□□□ -0.22
DDX41-210ENST00000509576 IGLV3-10A0A075B6K4 115 aa13.69□□□□□ -0.22
DDX41-210ENST00000509576 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.69□□□□□ -0.22
DDX41-210ENST00000509576 DRGXA6NNA5 263 aa13.69□□□□□ -0.22
DDX41-210ENST00000509576 CYSRT1A8MQ03 144 aa13.69□□□□□ -0.22
DDX41-210ENST00000509576 FOXN3O00409 490 aaPredicted RBP13.69□□□□□ -0.22
DDX41-210ENST00000509576 MED7O43513 233 aa13.69□□□□□ -0.22
DDX41-210ENST00000509576 MT-CO3P00414 261 aa13.69□□□□□ -0.22
DDX41-210ENST00000509576 CDH4P55283 916 aa13.69□□□□□ -0.22
DDX41-210ENST00000509576 NUCB2P80303 420 aa13.69□□□□□ -0.22
DDX41-210ENST00000509576 ARF5P84085 180 aa13.69□□□□□ -0.22
DDX41-210ENST00000509576 SLC6A3Q01959 620 aa13.69□□□□□ -0.22
DDX41-210ENST00000509576 ZNF177Q13360 481 aaPredicted RBP13.69□□□□□ -0.22
DDX41-210ENST00000509576 ILKQ13418 452 aa13.69□□□□□ -0.22
DDX41-210ENST00000509576 STAT4Q14765 748 aa13.69□□□□□ -0.22
DDX41-210ENST00000509576 SETMARQ53H47 684 aaPredicted RBP13.69□□□□□ -0.22
DDX41-210ENST00000509576 C22orf39Q6P5X5 142 aa13.69□□□□□ -0.22
DDX41-210ENST00000509576 DPY19L3Q6ZPD9 716 aa13.69□□□□□ -0.22
DDX41-210ENST00000509576 C11orf57Q6ZUT1 292 aaPredicted RBP13.69□□□□□ -0.22
DDX41-210ENST00000509576 TFAP2DQ7Z6R9 452 aa13.69□□□□□ -0.22
DDX41-210ENST00000509576 HORMAD1Q86X24 394 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms