RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 TBC1D3CQ6IPX1 549 aa19.08■□□□□ 0.64
UBE3D-207ENST00000509102 LUZP1Q86V48 1076 aa19.08■□□□□ 0.64
UBE3D-207ENST00000509102 TBC1D3Q8IZP1 549 aaPredicted RBP19.08■□□□□ 0.64
UBE3D-207ENST00000509102 OR7D4Q8NG98 312 aa19.08■□□□□ 0.64
UBE3D-207ENST00000509102 OR2I1PQ8NGU4 316 aa19.08■□□□□ 0.64
UBE3D-207ENST00000509102 C1orf216Q8TAB5 229 aa19.08■□□□□ 0.64
UBE3D-207ENST00000509102 PIP4K2CQ8TBX8 421 aa19.08■□□□□ 0.64
UBE3D-207ENST00000509102 PPP1R16AQ96I34 528 aa19.08■□□□□ 0.64
UBE3D-207ENST00000509102 NAP1L5Q96NT1 182 aaPredicted RBP19.08■□□□□ 0.64
UBE3D-207ENST00000509102 EPAS1Q99814 870 aa19.08■□□□□ 0.64
UBE3D-207ENST00000509102 ACE2Q9BYF1 805 aaPredicted RBP19.08■□□□□ 0.64
UBE3D-207ENST00000509102 HAUS4Q9H6D7 363 aa19.08■□□□□ 0.64
UBE3D-207ENST00000509102 PPM1HQ9ULR3 514 aa19.08■□□□□ 0.64
UBE3D-207ENST00000509102 PCDHB9Q9Y5E1 797 aa19.08■□□□□ 0.64
UBE3D-207ENST00000509102 CACNA1EQ15878 2313 aa19.08■□□□□ 0.64
UBE3D-207ENST00000509102 ADAMTS9Q9P2N4 1935 aa19.08■□□□□ 0.64
UBE3D-207ENST00000509102 CXorf51AA0A1B0GTR3 108 aa19.07■□□□□ 0.64
UBE3D-207ENST00000509102 A0A1B0GVT2 93 aa19.07■□□□□ 0.64
UBE3D-207ENST00000509102 A0A1W2PPC4 97 aa19.07■□□□□ 0.64
UBE3D-207ENST00000509102 GIPC1O14908 333 aa19.07■□□□□ 0.64
UBE3D-207ENST00000509102 CCP110O43303 1012 aa19.07■□□□□ 0.64
UBE3D-207ENST00000509102 LRIG2O94898 1065 aa19.07■□□□□ 0.64
UBE3D-207ENST00000509102 MT-CO1P00395 513 aa19.07■□□□□ 0.64
UBE3D-207ENST00000509102 TPM3P06753 285 aa19.07■□□□□ 0.64
UBE3D-207ENST00000509102 ZNF883P0CG24 379 aa19.07■□□□□ 0.64
UBE3D-207ENST00000509102 NUDT1P36639 197 aa19.07■□□□□ 0.64
UBE3D-207ENST00000509102 UBASH3AP57075 661 aa19.07■□□□□ 0.64
UBE3D-207ENST00000509102 FANCCQ00597 558 aa19.07■□□□□ 0.64
UBE3D-207ENST00000509102 SCAPQ12770 1279 aa19.07■□□□□ 0.64
UBE3D-207ENST00000509102 NR1I3Q14994 352 aa19.07■□□□□ 0.64
UBE3D-207ENST00000509102 SLC45A4Q5BKX6 768 aa19.07■□□□□ 0.64
UBE3D-207ENST00000509102 FIGNQ5HY92 759 aa19.07■□□□□ 0.64
UBE3D-207ENST00000509102 C22orf39Q6P5X5 142 aa19.07■□□□□ 0.64
UBE3D-207ENST00000509102 LINGO4Q6UY18 593 aa19.07■□□□□ 0.64
UBE3D-207ENST00000509102 VPS36Q86VN1 386 aa19.07■□□□□ 0.64
UBE3D-207ENST00000509102 CCDC185Q8N715 623 aa19.07■□□□□ 0.64
UBE3D-207ENST00000509102 IQCDQ96DY2 449 aa19.07■□□□□ 0.64
UBE3D-207ENST00000509102 TRIM11Q96F44 468 aa19.07■□□□□ 0.64
UBE3D-207ENST00000509102 CEP44Q9C0F1 390 aa19.07■□□□□ 0.64
UBE3D-207ENST00000509102 AASDHPPTQ9NRN7 309 aa19.07■□□□□ 0.64
UBE3D-207ENST00000509102 TMEM248Q9NWD8 314 aa19.07■□□□□ 0.64
UBE3D-207ENST00000509102 DONSONQ9NYP3 566 aa19.07■□□□□ 0.64
UBE3D-207ENST00000509102 ANKRD6Q9Y2G4 727 aa19.07■□□□□ 0.64
UBE3D-207ENST00000509102 NUMA1Q14980 2115 aa19.07■□□□□ 0.64
UBE3D-207ENST00000509102 NYNRINQ9P2P1 1898 aaKnown RBP19.06■□□□□ 0.64
UBE3D-207ENST00000509102 KPNA3O00505 521 aaPredicted RBP19.06■□□□□ 0.64
UBE3D-207ENST00000509102 RAMP2O60895 175 aa19.06■□□□□ 0.64
UBE3D-207ENST00000509102 IGHV4-34P06331 123 aa19.06■□□□□ 0.64
UBE3D-207ENST00000509102 GZMAP12544 262 aa19.06■□□□□ 0.64
UBE3D-207ENST00000509102 L1CAMP32004 1257 aa19.06■□□□□ 0.64
UBE3D-207ENST00000509102 CHRNA3P32297 505 aa19.06■□□□□ 0.64
UBE3D-207ENST00000509102 PRKCIP41743 596 aa19.06■□□□□ 0.64
UBE3D-207ENST00000509102 SERPINH1P50454 418 aaKnown RBP19.06■□□□□ 0.64
UBE3D-207ENST00000509102 RPL7AP62424 266 aaKnown RBP19.06■□□□□ 0.64
UBE3D-207ENST00000509102 SUZ12Q15022 739 aaKnown RBP19.06■□□□□ 0.64
UBE3D-207ENST00000509102 HLA-BQ31612 363 aa19.06■□□□□ 0.64
UBE3D-207ENST00000509102 RAB6CQ53S08 254 aa19.06■□□□□ 0.64
UBE3D-207ENST00000509102 MANEALQ5VSG8 457 aa19.06■□□□□ 0.64
UBE3D-207ENST00000509102 TMC6Q7Z403 805 aa19.06■□□□□ 0.64
UBE3D-207ENST00000509102 PIP4P1Q86T03 277 aa19.06■□□□□ 0.64
UBE3D-207ENST00000509102 PRPF39Q86UA1 669 aaKnown RBP19.06■□□□□ 0.64
UBE3D-207ENST00000509102 ZNF354CQ86Y25 554 aa19.06■□□□□ 0.64
UBE3D-207ENST00000509102 PCDH20Q8N6Y1 951 aaKnown RBP19.06■□□□□ 0.64
UBE3D-207ENST00000509102 TMIEQ8NEW7 156 aa19.06■□□□□ 0.64
UBE3D-207ENST00000509102 OR2A12Q8NGT7 310 aa19.06■□□□□ 0.64
UBE3D-207ENST00000509102 RAB6CQ9H0N0 254 aa19.06■□□□□ 0.64
UBE3D-207ENST00000509102 MAGEH1Q9H213 219 aa19.06■□□□□ 0.64
UBE3D-207ENST00000509102 CATSPERBQ9H7T0 1116 aa19.06■□□□□ 0.64
UBE3D-207ENST00000509102 DNAI1Q9UI46 699 aa19.06■□□□□ 0.64
UBE3D-207ENST00000509102 BZW2Q9Y6E2 419 aaKnown RBP19.06■□□□□ 0.64
UBE3D-207ENST00000509102 SCINQ9Y6U3 715 aa19.06■□□□□ 0.64
UBE3D-207ENST00000509102 ASCC3Q8N3C0 2202 aaKnown RBP19.05■□□□□ 0.64
UBE3D-207ENST00000509102 TCRBV5S1A1TA0A578 114 aa19.05■□□□□ 0.64
UBE3D-207ENST00000509102 K7ERQ8 282 aa19.05■□□□□ 0.64
UBE3D-207ENST00000509102 DFNA5O60443 496 aa19.05■□□□□ 0.64
UBE3D-207ENST00000509102 GJB3O75712 270 aa19.05■□□□□ 0.64
UBE3D-207ENST00000509102 EPHB2P29323 1055 aa19.05■□□□□ 0.64
UBE3D-207ENST00000509102 PMLP29590 882 aa19.05■□□□□ 0.64
UBE3D-207ENST00000509102 DRD3P35462 400 aa19.05■□□□□ 0.64
UBE3D-207ENST00000509102 DNA2P51530 1060 aa19.05■□□□□ 0.64
UBE3D-207ENST00000509102 SIM1P81133 766 aaPredicted RBP19.05■□□□□ 0.64
UBE3D-207ENST00000509102 CNTN1Q12860 1018 aa19.05■□□□□ 0.64
UBE3D-207ENST00000509102 POLD3Q15054 466 aaPredicted RBP19.05■□□□□ 0.64
UBE3D-207ENST00000509102 POM121L1PQ3SYA9 428 aa19.05■□□□□ 0.64
UBE3D-207ENST00000509102 TDRD12Q587J7 1177 aaKnown RBP19.05■□□□□ 0.64
UBE3D-207ENST00000509102 PPP1R15BQ5SWA1 713 aa19.05■□□□□ 0.64
UBE3D-207ENST00000509102 NAXDQ8IW45 347 aa19.05■□□□□ 0.64
UBE3D-207ENST00000509102 SYT11Q9BT88 431 aa19.05■□□□□ 0.64
UBE3D-207ENST00000509102 TM7SF3Q9NS93 570 aa19.05■□□□□ 0.64
UBE3D-207ENST00000509102 ZNF212Q9UDV6 495 aa19.05■□□□□ 0.64
UBE3D-207ENST00000509102 IL36AQ9UHA7 158 aa19.05■□□□□ 0.64
UBE3D-207ENST00000509102 SARDHQ9UL12 918 aa19.05■□□□□ 0.64
UBE3D-207ENST00000509102 ZSCAN5CA6NGD5 496 aaPredicted RBP19.04■□□□□ 0.64
UBE3D-207ENST00000509102 FAM72CH0Y354 149 aa19.04■□□□□ 0.64
UBE3D-207ENST00000509102 SMAD6O43541 496 aaKnown RBP19.04■□□□□ 0.64
UBE3D-207ENST00000509102 PLRG1O43660 514 aaKnown RBP19.04■□□□□ 0.64
UBE3D-207ENST00000509102 CREB3O43889 395 aa19.04■□□□□ 0.64
UBE3D-207ENST00000509102 RTN2O75298 545 aa19.04■□□□□ 0.64
UBE3D-207ENST00000509102 RNF8O76064 485 aa19.04■□□□□ 0.64
UBE3D-207ENST00000509102 FTLP02792 175 aaPredicted RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms