RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 EBF2Q9HAK2 575 aa13.92□□□□□ -0.18
CCHCR1-227ENST00000508852 SAMSN1Q9NSI8 373 aaKnown RBP13.92□□□□□ -0.18
CCHCR1-227ENST00000508852 TOR4AQ9NXH8 423 aa13.92□□□□□ -0.18
CCHCR1-227ENST00000508852 IL36AQ9UHA7 158 aa13.92□□□□□ -0.18
CCHCR1-227ENST00000508852 VPS51Q9UID3 782 aa13.92□□□□□ -0.18
CCHCR1-227ENST00000508852 TMEM59LQ9UK28 342 aa13.92□□□□□ -0.18
CCHCR1-227ENST00000508852 BTBD3Q9Y2F9 522 aa13.92□□□□□ -0.18
CCHCR1-227ENST00000508852 PLXNB3Q9ULL4 1909 aa13.92□□□□□ -0.18
CCHCR1-227ENST00000508852 ANKRD11Q6UB99 2663 aaPredicted RBP13.91□□□□□ -0.18
CCHCR1-227ENST00000508852 GOLGA8SH3BPF8 625 aa13.91□□□□□ -0.18
CCHCR1-227ENST00000508852 KPNA3O00505 521 aaPredicted RBP13.91□□□□□ -0.18
CCHCR1-227ENST00000508852 KCNK3O14649 394 aa13.91□□□□□ -0.18
CCHCR1-227ENST00000508852 ENC1O14682 589 aa13.91□□□□□ -0.18
CCHCR1-227ENST00000508852 RIOK3O14730 519 aaKnown RBP13.91□□□□□ -0.18
CCHCR1-227ENST00000508852 SRGAP2O75044 1071 aa13.91□□□□□ -0.18
CCHCR1-227ENST00000508852 RTN2O75298 545 aa13.91□□□□□ -0.18
CCHCR1-227ENST00000508852 CNTN5O94779 1100 aa13.91□□□□□ -0.18
CCHCR1-227ENST00000508852 WNT1P04628 370 aa13.91□□□□□ -0.18
CCHCR1-227ENST00000508852 CCDC172P0C7W6 258 aa13.91□□□□□ -0.18
CCHCR1-227ENST00000508852 VAV1P15498 845 aa13.91□□□□□ -0.18
CCHCR1-227ENST00000508852 EPHA8P29322 1005 aaPredicted RBP13.91□□□□□ -0.18
CCHCR1-227ENST00000508852 SDC4P31431 198 aa13.91□□□□□ -0.18
CCHCR1-227ENST00000508852 AKT2P31751 481 aa13.91□□□□□ -0.18
CCHCR1-227ENST00000508852 SOX5P35711 763 aa13.91□□□□□ -0.18
CCHCR1-227ENST00000508852 STAT1P42224 750 aa13.91□□□□□ -0.18
CCHCR1-227ENST00000508852 ALFQ53S48 1182 aa13.91□□□□□ -0.18
CCHCR1-227ENST00000508852 HSP90AA4PQ58FG1 418 aa13.91□□□□□ -0.18
CCHCR1-227ENST00000508852 KCNT1Q5JUK3 1230 aa13.91□□□□□ -0.18
CCHCR1-227ENST00000508852 NAA35Q5VZE5 725 aa13.91□□□□□ -0.18
CCHCR1-227ENST00000508852 LAYNQ6UX15 382 aa13.91□□□□□ -0.18
CCHCR1-227ENST00000508852 STRADAQ7RTN6 431 aa13.91□□□□□ -0.18
CCHCR1-227ENST00000508852 NOP9Q86U38 636 aaKnown RBP13.91□□□□□ -0.18
CCHCR1-227ENST00000508852 OR2A12Q8NGT7 310 aa13.91□□□□□ -0.18
CCHCR1-227ENST00000508852 CPA5Q8WXQ8 436 aa13.91□□□□□ -0.18
CCHCR1-227ENST00000508852 KLHDC7BQ96G42 594 aa13.91□□□□□ -0.18
CCHCR1-227ENST00000508852 LRIG1Q96JA1 1093 aa13.91□□□□□ -0.18
CCHCR1-227ENST00000508852 CNDP2Q96KP4 475 aaKnown RBP13.91□□□□□ -0.18
CCHCR1-227ENST00000508852 OSBPL2Q9H1P3 480 aa13.91□□□□□ -0.18
CCHCR1-227ENST00000508852 ANO10Q9NW15 660 aa13.91□□□□□ -0.18
CCHCR1-227ENST00000508852 ARHGAP20Q9P2F6 1191 aa13.91□□□□□ -0.18
CCHCR1-227ENST00000508852 SARDHQ9UL12 918 aa13.91□□□□□ -0.18
CCHCR1-227ENST00000508852 HPCAL4Q9UM19 191 aa13.91□□□□□ -0.18
CCHCR1-227ENST00000508852 CFAP47Q6ZTR5 3102 aa13.9□□□□□ -0.18
CCHCR1-227ENST00000508852 ANKRD62A6NC57 917 aa13.9□□□□□ -0.18
CCHCR1-227ENST00000508852 GOLGA8CPA6NN73 597 aa13.9□□□□□ -0.18
CCHCR1-227ENST00000508852 BNIP3LO60238 219 aa13.9□□□□□ -0.18
CCHCR1-227ENST00000508852 CAPNS1P04632 268 aa13.9□□□□□ -0.18
CCHCR1-227ENST00000508852 CYP1A1P04798 512 aaPredicted RBP13.9□□□□□ -0.18
CCHCR1-227ENST00000508852 MMEP08473 750 aa13.9□□□□□ -0.18
CCHCR1-227ENST00000508852 MMP8P22894 467 aa13.9□□□□□ -0.18
CCHCR1-227ENST00000508852 FLT3P36888 993 aa13.9□□□□□ -0.18
CCHCR1-227ENST00000508852 PTPN9P43378 593 aa13.9□□□□□ -0.18
CCHCR1-227ENST00000508852 NSFP46459 744 aaKnown RBP13.9□□□□□ -0.18
CCHCR1-227ENST00000508852 MAPKAPK2P49137 400 aa13.9□□□□□ -0.18
CCHCR1-227ENST00000508852 SERPINH1P50454 418 aaKnown RBP13.9□□□□□ -0.18
CCHCR1-227ENST00000508852 POLR2FP61218 127 aaKnown RBP13.9□□□□□ -0.18
CCHCR1-227ENST00000508852 PPP2CBP62714 309 aa13.9□□□□□ -0.18
CCHCR1-227ENST00000508852 PPP2CAP67775 309 aa13.9□□□□□ -0.18
CCHCR1-227ENST00000508852 GNA12Q03113 381 aa13.9□□□□□ -0.18
CCHCR1-227ENST00000508852 CDKAL1Q5VV42 579 aa13.9□□□□□ -0.18
CCHCR1-227ENST00000508852 PPP1R2P3Q6NXS1 205 aa13.9□□□□□ -0.18
CCHCR1-227ENST00000508852 C22orf39Q6P5X5 142 aa13.9□□□□□ -0.18
CCHCR1-227ENST00000508852 SASS6Q6UVJ0 657 aa13.9□□□□□ -0.18
CCHCR1-227ENST00000508852 ERN2Q76MJ5 926 aaKnown RBP13.9□□□□□ -0.18
CCHCR1-227ENST00000508852 HORMAD1Q86X24 394 aa13.9□□□□□ -0.18
CCHCR1-227ENST00000508852 OR52K2Q8NGK3 314 aa13.9□□□□□ -0.18
CCHCR1-227ENST00000508852 ISG20Q96AZ6 181 aaKnown RBP13.9□□□□□ -0.18
CCHCR1-227ENST00000508852 IFT43Q96FT9 208 aa13.9□□□□□ -0.18
CCHCR1-227ENST00000508852 CFAP57Q96MR6 1250 aa13.9□□□□□ -0.18
CCHCR1-227ENST00000508852 PSMB7Q99436 277 aa13.9□□□□□ -0.18
CCHCR1-227ENST00000508852 SPON2Q9BUD6 331 aa13.9□□□□□ -0.18
CCHCR1-227ENST00000508852 VPS16Q9H269 839 aa13.9□□□□□ -0.18
CCHCR1-227ENST00000508852 ATP13A1Q9HD20 1204 aa13.9□□□□□ -0.18
CCHCR1-227ENST00000508852 EVA1BQ9NVM1 165 aa13.9□□□□□ -0.18
CCHCR1-227ENST00000508852 DONSONQ9NYP3 566 aa13.9□□□□□ -0.18
CCHCR1-227ENST00000508852 OR12D3Q9UGF7 316 aa13.9□□□□□ -0.18
CCHCR1-227ENST00000508852 WDFY3Q8IZQ1 3526 aa13.89□□□□□ -0.19
CCHCR1-227ENST00000508852 ZFHX4Q86UP3 3567 aa13.89□□□□□ -0.19
CCHCR1-227ENST00000508852 ZSCAN5CA6NGD5 496 aaPredicted RBP13.89□□□□□ -0.19
CCHCR1-227ENST00000508852 CBX4O00257 560 aa13.89□□□□□ -0.19
CCHCR1-227ENST00000508852 RFPL3O75679 317 aa13.89□□□□□ -0.19
CCHCR1-227ENST00000508852 GFPT2O94808 682 aa13.89□□□□□ -0.19
CCHCR1-227ENST00000508852 CALB1P05937 261 aa13.89□□□□□ -0.19
CCHCR1-227ENST00000508852 RHOQP17081 205 aa13.89□□□□□ -0.19
CCHCR1-227ENST00000508852 HNRNPA2B1P22626 353 aaKnown RBP13.89□□□□□ -0.19
CCHCR1-227ENST00000508852 GGCXP38435 758 aa13.89□□□□□ -0.19
CCHCR1-227ENST00000508852 IRAK1P51617 712 aa13.89□□□□□ -0.19
CCHCR1-227ENST00000508852 NEK3P51956 506 aa13.89□□□□□ -0.19
CCHCR1-227ENST00000508852 GSCP56915 257 aaPredicted RBP13.89□□□□□ -0.19
CCHCR1-227ENST00000508852 IL9RQ01113 521 aa13.89□□□□□ -0.19
CCHCR1-227ENST00000508852 KRT31Q15323 416 aa13.89□□□□□ -0.19
CCHCR1-227ENST00000508852 PIP5KL1Q5T9C9 394 aa13.89□□□□□ -0.19
CCHCR1-227ENST00000508852 KIAA1161Q6NSJ0 714 aa13.89□□□□□ -0.19
CCHCR1-227ENST00000508852 TFAP2DQ7Z6R9 452 aa13.89□□□□□ -0.19
CCHCR1-227ENST00000508852 FAM131BQ86XD5 332 aa13.89□□□□□ -0.19
CCHCR1-227ENST00000508852 CACTIN-AS1Q8N1I8 211 aa13.89□□□□□ -0.19
CCHCR1-227ENST00000508852 NEK11Q8NG66 645 aa13.89□□□□□ -0.19
CCHCR1-227ENST00000508852 RAB7BQ96AH8 199 aa13.89□□□□□ -0.19
CCHCR1-227ENST00000508852 ARHGEF26Q96DR7 871 aa13.89□□□□□ -0.19
CCHCR1-227ENST00000508852 FEM1CQ96JP0 617 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms