RNA–Protein interactions for RNA: ENST00000508387.5

NR1I3-225, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 634 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-225ENST00000508387 CBX4O00257 560 aa13.12□□□□□ -0.31
NR1I3-225ENST00000508387 MCF2LO15068 1137 aa13.12□□□□□ -0.31
NR1I3-225ENST00000508387 ATMINO43313 823 aaPredicted RBP13.12□□□□□ -0.31
NR1I3-225ENST00000508387 PLRG1O43660 514 aaKnown RBP13.12□□□□□ -0.31
NR1I3-225ENST00000508387 ZMPSTE24O75844 475 aa13.12□□□□□ -0.31
NR1I3-225ENST00000508387 CD160O95971 181 aa13.12□□□□□ -0.31
NR1I3-225ENST00000508387 SDC4P31431 198 aa13.12□□□□□ -0.31
NR1I3-225ENST00000508387 VASPP50552 380 aaPredicted RBP13.12□□□□□ -0.31
NR1I3-225ENST00000508387 OXCT1P55809 520 aa13.12□□□□□ -0.31
NR1I3-225ENST00000508387 GSCP56915 257 aaPredicted RBP13.12□□□□□ -0.31
NR1I3-225ENST00000508387 RPL7AP62424 266 aaKnown RBP13.12□□□□□ -0.31
NR1I3-225ENST00000508387 OGDHQ02218 1023 aa13.12□□□□□ -0.31
NR1I3-225ENST00000508387 SHBQ15464 509 aa13.12□□□□□ -0.31
NR1I3-225ENST00000508387 TEAD4Q15561 434 aa13.12□□□□□ -0.31
NR1I3-225ENST00000508387 PIP5KL1Q5T9C9 394 aa13.12□□□□□ -0.31
NR1I3-225ENST00000508387 WDR59Q6PJI9 974 aa13.12□□□□□ -0.31
NR1I3-225ENST00000508387 TRIM72Q6ZMU5 477 aa13.12□□□□□ -0.31
NR1I3-225ENST00000508387 ARCQ7LC44 396 aa13.12□□□□□ -0.31
NR1I3-225ENST00000508387 SETD3Q86TU7 594 aaPredicted RBP13.12□□□□□ -0.31
NR1I3-225ENST00000508387 NLRP14Q86W24 1093 aa13.12□□□□□ -0.31
NR1I3-225ENST00000508387 PHF13Q86YI8 300 aaPredicted RBP13.12□□□□□ -0.31
NR1I3-225ENST00000508387 MARCH9Q86YJ5 346 aa13.12□□□□□ -0.31
NR1I3-225ENST00000508387 GATAD2AQ86YP4 633 aa13.12□□□□□ -0.31
NR1I3-225ENST00000508387 NETO2Q8NC67 525 aa13.12□□□□□ -0.31
NR1I3-225ENST00000508387 ANKRD20A12PQ8NF67 263 aa13.12□□□□□ -0.31
NR1I3-225ENST00000508387 BAP1Q92560 729 aa13.12□□□□□ -0.31
NR1I3-225ENST00000508387 KLK6Q92876 244 aa13.12□□□□□ -0.31
NR1I3-225ENST00000508387 GATA6Q92908 595 aa13.12□□□□□ -0.31
NR1I3-225ENST00000508387 MCEEQ96PE7 176 aa13.12□□□□□ -0.31
NR1I3-225ENST00000508387 SYT11Q9BT88 431 aa13.12□□□□□ -0.31
NR1I3-225ENST00000508387 SPON2Q9BUD6 331 aa13.12□□□□□ -0.31
NR1I3-225ENST00000508387 SELENOOQ9BVL4 669 aa13.12□□□□□ -0.31
NR1I3-225ENST00000508387 ZYG11BQ9C0D3 744 aa13.12□□□□□ -0.31
NR1I3-225ENST00000508387 ATP13A1Q9HD20 1204 aa13.12□□□□□ -0.31
NR1I3-225ENST00000508387 OSGEPQ9NPF4 335 aa13.12□□□□□ -0.31
NR1I3-225ENST00000508387 AASDHPPTQ9NRN7 309 aa13.12□□□□□ -0.31
NR1I3-225ENST00000508387 TOR4AQ9NXH8 423 aa13.12□□□□□ -0.31
NR1I3-225ENST00000508387 ARHGAP20Q9P2F6 1191 aa13.12□□□□□ -0.31
NR1I3-225ENST00000508387 DNAI1Q9UI46 699 aa13.12□□□□□ -0.31
NR1I3-225ENST00000508387 FCF1Q9Y324 198 aaKnown RBP13.12□□□□□ -0.31
NR1I3-225ENST00000508387 FREM2Q5SZK8 3169 aa13.12□□□□□ -0.31
NR1I3-225ENST00000508387 TBC1D3DA0A087WVF3 549 aa13.11□□□□□ -0.31
NR1I3-225ENST00000508387 TBC1D3IA0A087WXS9 549 aa13.11□□□□□ -0.31
NR1I3-225ENST00000508387 TBC1D3EA0A087X179 549 aa13.11□□□□□ -0.31
NR1I3-225ENST00000508387 TBC1D3KA0A087X1G2 549 aa13.11□□□□□ -0.31
NR1I3-225ENST00000508387 TBC1D3FA6NER0 549 aaPredicted RBP13.11□□□□□ -0.31
NR1I3-225ENST00000508387 GOLGA8CPA6NN73 597 aa13.11□□□□□ -0.31
NR1I3-225ENST00000508387 TMCO5BA8MYB1 307 aa13.11□□□□□ -0.31
NR1I3-225ENST00000508387 TBC1D3LB9A6J9 549 aa13.11□□□□□ -0.31
NR1I3-225ENST00000508387 LRIG2O94898 1065 aa13.11□□□□□ -0.31
NR1I3-225ENST00000508387 TBC1D3HP0C7X1 549 aa13.11□□□□□ -0.31
NR1I3-225ENST00000508387 ZNF883P0CG24 379 aa13.11□□□□□ -0.31
NR1I3-225ENST00000508387 KRT3P12035 628 aa13.11□□□□□ -0.31
NR1I3-225ENST00000508387 GPD1P21695 349 aa13.11□□□□□ -0.31
NR1I3-225ENST00000508387 GKP32189 559 aa13.11□□□□□ -0.31
NR1I3-225ENST00000508387 ADRA1BP35368 520 aa13.11□□□□□ -0.31
NR1I3-225ENST00000508387 PTPN9P43378 593 aa13.11□□□□□ -0.31
NR1I3-225ENST00000508387 SERPINH1P50454 418 aaKnown RBP13.11□□□□□ -0.31
NR1I3-225ENST00000508387 RACK1P63244 317 aaKnown RBP13.11□□□□□ -0.31
NR1I3-225ENST00000508387 KRT83P78385 493 aa13.11□□□□□ -0.31
NR1I3-225ENST00000508387 MTA1Q13330 715 aa13.11□□□□□ -0.31
NR1I3-225ENST00000508387 ZNF423Q2M1K9 1284 aa13.11□□□□□ -0.31
NR1I3-225ENST00000508387 C6orf118Q5T5N4 469 aa13.11□□□□□ -0.31
NR1I3-225ENST00000508387 TBC1D3GQ6DHY5 549 aa13.11□□□□□ -0.31
NR1I3-225ENST00000508387 TBC1D3CQ6IPX1 549 aa13.11□□□□□ -0.31
NR1I3-225ENST00000508387 RWDD4Q6NW29 188 aaKnown RBP13.11□□□□□ -0.31
NR1I3-225ENST00000508387 IL27RAQ6UWB1 636 aa13.11□□□□□ -0.31
NR1I3-225ENST00000508387 LRSAM1Q6UWE0 723 aa13.11□□□□□ -0.31
NR1I3-225ENST00000508387 TBC1D3Q8IZP1 549 aaPredicted RBP13.11□□□□□ -0.31
NR1I3-225ENST00000508387 C3orf20Q8ND61 904 aa13.11□□□□□ -0.31
NR1I3-225ENST00000508387 CENPIQ92674 756 aaPredicted RBP13.11□□□□□ -0.31
NR1I3-225ENST00000508387 SERAC1Q96JX3 654 aa13.11□□□□□ -0.31
NR1I3-225ENST00000508387 FUCA2Q9BTY2 467 aa13.11□□□□□ -0.31
NR1I3-225ENST00000508387 C2orf49Q9BVC5 232 aaPredicted RBP13.11□□□□□ -0.31
NR1I3-225ENST00000508387 FZD3Q9NPG1 666 aa13.11□□□□□ -0.31
NR1I3-225ENST00000508387 OR12D3Q9UGF7 316 aa13.11□□□□□ -0.31
NR1I3-225ENST00000508387 PAXBP1Q9Y5B6 917 aa13.11□□□□□ -0.31
NR1I3-225ENST00000508387 PCDHB9Q9Y5E1 797 aa13.11□□□□□ -0.31
NR1I3-225ENST00000508387 CHD5Q8TDI0 1954 aa13.11□□□□□ -0.31
NR1I3-225ENST00000508387 CFAP47Q6ZTR5 3102 aa13.1□□□□□ -0.31
NR1I3-225ENST00000508387 ILVBLA1L0T0 632 aa13.1□□□□□ -0.31
NR1I3-225ENST00000508387 LRRC53A6NM62 1247 aa13.1□□□□□ -0.31
NR1I3-225ENST00000508387 C1QTNF3-AMACRE9PGA6 284 aa13.1□□□□□ -0.31
NR1I3-225ENST00000508387 KPNA3O00505 521 aaPredicted RBP13.1□□□□□ -0.31
NR1I3-225ENST00000508387 VILLO15195 856 aa13.1□□□□□ -0.31
NR1I3-225ENST00000508387 LATO43561 262 aa13.1□□□□□ -0.31
NR1I3-225ENST00000508387 ATXN1LP0C7T5 689 aaKnown RBP13.1□□□□□ -0.31
NR1I3-225ENST00000508387 PRLRP16471 622 aa13.1□□□□□ -0.31
NR1I3-225ENST00000508387 CHRNA3P32297 505 aa13.1□□□□□ -0.31
NR1I3-225ENST00000508387 CCT8P50990 548 aa13.1□□□□□ -0.31
NR1I3-225ENST00000508387 CCR5P51681 352 aa13.1□□□□□ -0.31
NR1I3-225ENST00000508387 C21orf59P57076 290 aa13.1□□□□□ -0.31
NR1I3-225ENST00000508387 GNA12Q03113 381 aa13.1□□□□□ -0.31
NR1I3-225ENST00000508387 ARSIQ5FYB1 569 aa13.1□□□□□ -0.31
NR1I3-225ENST00000508387 PPP1R15BQ5SWA1 713 aa13.1□□□□□ -0.31
NR1I3-225ENST00000508387 DNAJC24Q6P3W2 148 aa13.1□□□□□ -0.31
NR1I3-225ENST00000508387 DBX2Q6ZNG2 339 aa13.1□□□□□ -0.31
NR1I3-225ENST00000508387 DPY19L3Q6ZPD9 716 aa13.1□□□□□ -0.31
NR1I3-225ENST00000508387 STRADAQ7RTN6 431 aa13.1□□□□□ -0.31
NR1I3-225ENST00000508387 IRF2BP2Q7Z5L9 587 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms