RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 OR2T34Q8NGX1 318 aa20.33■□□□□ 0.85
SFXN1-209ENST00000508290 CASKIN2Q8WXE0 1202 aa20.33■□□□□ 0.85
SFXN1-209ENST00000508290 FAM131CQ96AQ9 280 aa20.33■□□□□ 0.85
SFXN1-209ENST00000508290 ISG20Q96AZ6 181 aaKnown RBP20.33■□□□□ 0.85
SFXN1-209ENST00000508290 LCMT1Q9UIC8 334 aa20.33■□□□□ 0.85
SFXN1-209ENST00000508290 PPM1HQ9ULR3 514 aa20.33■□□□□ 0.85
SFXN1-209ENST00000508290 NEU3Q9UQ49 428 aa20.33■□□□□ 0.85
SFXN1-209ENST00000508290 FAM72CH0Y354 149 aa20.32■□□□□ 0.84
SFXN1-209ENST00000508290 ARHGAP33O14559 1287 aa20.32■□□□□ 0.84
SFXN1-209ENST00000508290 ATMINO43313 823 aaPredicted RBP20.32■□□□□ 0.84
SFXN1-209ENST00000508290 PRPSAP2O60256 369 aa20.32■□□□□ 0.84
SFXN1-209ENST00000508290 SNAP91O60641 907 aa20.32■□□□□ 0.84
SFXN1-209ENST00000508290 ZMPSTE24O75844 475 aa20.32■□□□□ 0.84
SFXN1-209ENST00000508290 PRNPP04156 253 aa20.32■□□□□ 0.84
SFXN1-209ENST00000508290 ENGP17813 658 aa20.32■□□□□ 0.84
SFXN1-209ENST00000508290 PCK1P35558 622 aa20.32■□□□□ 0.84
SFXN1-209ENST00000508290 NUDT1P36639 197 aa20.32■□□□□ 0.84
SFXN1-209ENST00000508290 OGDHQ02218 1023 aa20.32■□□□□ 0.84
SFXN1-209ENST00000508290 SEMA3BQ13214 749 aa20.32■□□□□ 0.84
SFXN1-209ENST00000508290 PARP15Q460N3 678 aa20.32■□□□□ 0.84
SFXN1-209ENST00000508290 FAM72AQ5TYM5 149 aa20.32■□□□□ 0.84
SFXN1-209ENST00000508290 FAM72DQ6L9T8 149 aa20.32■□□□□ 0.84
SFXN1-209ENST00000508290 C22orf39Q6P5X5 142 aa20.32■□□□□ 0.84
SFXN1-209ENST00000508290 Q6ZVU0 165 aa20.32■□□□□ 0.84
SFXN1-209ENST00000508290 FAM72BQ86X60 149 aa20.32■□□□□ 0.84
SFXN1-209ENST00000508290 HDDC3Q8N4P3 179 aa20.32■□□□□ 0.84
SFXN1-209ENST00000508290 TMIEQ8NEW7 156 aa20.32■□□□□ 0.84
SFXN1-209ENST00000508290 OR7D4Q8NG98 312 aa20.32■□□□□ 0.84
SFXN1-209ENST00000508290 OR8K1Q8NGG5 319 aa20.32■□□□□ 0.84
SFXN1-209ENST00000508290 ARHGEF2Q92974 986 aaKnown RBP20.32■□□□□ 0.84
SFXN1-209ENST00000508290 DNAJC7Q99615 494 aa20.32■□□□□ 0.84
SFXN1-209ENST00000508290 RXFP3Q9NSD7 469 aa20.32■□□□□ 0.84
SFXN1-209ENST00000508290 CACNA1AO00555 2505 aa20.32■□□□□ 0.84
SFXN1-209ENST00000508290 SDK1Q7Z5N4 2213 aa20.31■□□□□ 0.84
SFXN1-209ENST00000508290 NUP205Q92621 2012 aa20.31■□□□□ 0.84
SFXN1-209ENST00000508290 A0A1W2PP55 124 aa20.31■□□□□ 0.84
SFXN1-209ENST00000508290 BCAT2O15382 392 aaPredicted RBP20.31■□□□□ 0.84
SFXN1-209ENST00000508290 AFF3P51826 1226 aaKnown RBP20.31■□□□□ 0.84
SFXN1-209ENST00000508290 PIGHQ14442 188 aaPredicted RBP20.31■□□□□ 0.84
SFXN1-209ENST00000508290 POLD3Q15054 466 aaPredicted RBP20.31■□□□□ 0.84
SFXN1-209ENST00000508290 ERMARDQ5T6L9 678 aa20.31■□□□□ 0.84
SFXN1-209ENST00000508290 KIAA0895LQ68EN5 471 aa20.31■□□□□ 0.84
SFXN1-209ENST00000508290 ALKBH5Q6P6C2 394 aaKnown RBP20.31■□□□□ 0.84
SFXN1-209ENST00000508290 IL27RAQ6UWB1 636 aa20.31■□□□□ 0.84
SFXN1-209ENST00000508290 VSTM4Q8IW00 320 aa20.31■□□□□ 0.84
SFXN1-209ENST00000508290 OR2A12Q8NGT7 310 aa20.31■□□□□ 0.84
SFXN1-209ENST00000508290 C6orf106Q9H6K1 298 aaPredicted RBP20.31■□□□□ 0.84
SFXN1-209ENST00000508290 DNAI1Q9UI46 699 aa20.31■□□□□ 0.84
SFXN1-209ENST00000508290 AP4E1Q9UPM8 1137 aa20.31■□□□□ 0.84
SFXN1-209ENST00000508290 A0A087X0T9 212 aa20.3■□□□□ 0.84
SFXN1-209ENST00000508290 SSU72P8A0A1W2PR75 194 aa20.3■□□□□ 0.84
SFXN1-209ENST00000508290 TM4SF5O14894 197 aa20.3■□□□□ 0.84
SFXN1-209ENST00000508290 CREB3O43889 395 aa20.3■□□□□ 0.84
SFXN1-209ENST00000508290 MT-CO1P00395 513 aa20.3■□□□□ 0.84
SFXN1-209ENST00000508290 FAM228BP0C875 321 aa20.3■□□□□ 0.84
SFXN1-209ENST00000508290 VAV1P15498 845 aa20.3■□□□□ 0.84
SFXN1-209ENST00000508290 CD27P26842 260 aa20.3■□□□□ 0.84
SFXN1-209ENST00000508290 CCR5P51681 352 aa20.3■□□□□ 0.84
SFXN1-209ENST00000508290 GALCP54803 685 aa20.3■□□□□ 0.84
SFXN1-209ENST00000508290 TPI1P60174 286 aa20.3■□□□□ 0.84
SFXN1-209ENST00000508290 ARF5P84085 180 aa20.3■□□□□ 0.84
SFXN1-209ENST00000508290 TEAD4Q15561 434 aa20.3■□□□□ 0.84
SFXN1-209ENST00000508290 UMODL1-AS1Q8N2C9 162 aa20.3■□□□□ 0.84
SFXN1-209ENST00000508290 AADATQ8N5Z0 425 aa20.3■□□□□ 0.84
SFXN1-209ENST00000508290 RNF214Q8ND24 703 aa20.3■□□□□ 0.84
SFXN1-209ENST00000508290 PIP4K2CQ8TBX8 421 aa20.3■□□□□ 0.84
SFXN1-209ENST00000508290 BIRC7Q96CA5 298 aa20.3■□□□□ 0.84
SFXN1-209ENST00000508290 PPP1R16AQ96I34 528 aa20.3■□□□□ 0.84
SFXN1-209ENST00000508290 LRIG1Q96JA1 1093 aa20.3■□□□□ 0.84
SFXN1-209ENST00000508290 MIR1-1HGQ9H1L0 117 aa20.3■□□□□ 0.84
SFXN1-209ENST00000508290 NEUROG2Q9H2A3 272 aa20.3■□□□□ 0.84
SFXN1-209ENST00000508290 DYRK4Q9NR20 520 aa20.3■□□□□ 0.84
SFXN1-209ENST00000508290 ARHGAP20Q9P2F6 1191 aa20.3■□□□□ 0.84
SFXN1-209ENST00000508290 MYO1AQ9UBC5 1043 aa20.3■□□□□ 0.84
SFXN1-209ENST00000508290 IP6K2Q9UHH9 426 aa20.3■□□□□ 0.84
SFXN1-209ENST00000508290 C4orf47A7E2U8 309 aa20.29■□□□□ 0.84
SFXN1-209ENST00000508290 CDX4O14627 284 aaPredicted RBP20.29■□□□□ 0.84
SFXN1-209ENST00000508290 LRCH4O75427 683 aa20.29■□□□□ 0.84
SFXN1-209ENST00000508290 CHRNA3P32297 505 aa20.29■□□□□ 0.84
SFXN1-209ENST00000508290 HCAR3P49019 387 aa20.29■□□□□ 0.84
SFXN1-209ENST00000508290 ADPRHP54922 357 aa20.29■□□□□ 0.84
SFXN1-209ENST00000508290 ZNF252P-AS1Q0IIN9 211 aa20.29■□□□□ 0.84
SFXN1-209ENST00000508290 SLC14A1Q13336 389 aa20.29■□□□□ 0.84
SFXN1-209ENST00000508290 BOLA3Q53S33 107 aa20.29■□□□□ 0.84
SFXN1-209ENST00000508290 SARM1Q6SZW1 724 aa20.29■□□□□ 0.84
SFXN1-209ENST00000508290 CNGA4Q8IV77 575 aa20.29■□□□□ 0.84
SFXN1-209ENST00000508290 ZCCHC9Q8N567 271 aaKnown RBP20.29■□□□□ 0.84
SFXN1-209ENST00000508290 NIPA2Q8N8Q9 360 aa20.29■□□□□ 0.84
SFXN1-209ENST00000508290 SKA1Q96BD8 255 aa20.29■□□□□ 0.84
SFXN1-209ENST00000508290 EIF2B4Q9UI10 523 aaKnown RBP20.29■□□□□ 0.84
SFXN1-209ENST00000508290 UPK3BL1B0FP48 263 aa20.28■□□□□ 0.84
SFXN1-209ENST00000508290 UPK3BL2E5RIL1 263 aa20.28■□□□□ 0.84
SFXN1-209ENST00000508290 KDELR3O43731 214 aa20.28■□□□□ 0.84
SFXN1-209ENST00000508290 FSBPO95073 299 aa20.28■□□□□ 0.84
SFXN1-209ENST00000508290 CYP1A2P05177 515 aa20.28■□□□□ 0.84
SFXN1-209ENST00000508290 MIPP30301 263 aa20.28■□□□□ 0.84
SFXN1-209ENST00000508290 DRD3P35462 400 aa20.28■□□□□ 0.84
SFXN1-209ENST00000508290 GRIA4P48058 902 aa20.28■□□□□ 0.84
SFXN1-209ENST00000508290 NUMBP49757 651 aa20.28■□□□□ 0.84
SFXN1-209ENST00000508290 NDST2P52849 883 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms