RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 TMEM110-MUSTN1A8MSY1 372 aa20.3■□□□□ 0.84
SNX25-204ENST00000506896 RNASEH1O60930 286 aaKnown RBP20.3■□□□□ 0.84
SNX25-204ENST00000506896 SIN3BO75182 1162 aa20.3■□□□□ 0.84
SNX25-204ENST00000506896 ZMPSTE24O75844 475 aa20.3■□□□□ 0.84
SNX25-204ENST00000506896 ZNF806P0C7X5 589 aa20.3■□□□□ 0.84
SNX25-204ENST00000506896 ACADMP11310 421 aa20.3■□□□□ 0.84
SNX25-204ENST00000506896 ERCC2P18074 760 aa20.3■□□□□ 0.84
SNX25-204ENST00000506896 ACVRL1P37023 503 aa20.3■□□□□ 0.84
SNX25-204ENST00000506896 NOP2P46087 812 aaKnown RBP20.3■□□□□ 0.84
SNX25-204ENST00000506896 NUMBP49757 651 aa20.3■□□□□ 0.84
SNX25-204ENST00000506896 NDST2P52849 883 aa20.3■□□□□ 0.84
SNX25-204ENST00000506896 LMNB2Q03252 620 aa20.3■□□□□ 0.84
SNX25-204ENST00000506896 DPYSQ14117 519 aa20.3■□□□□ 0.84
SNX25-204ENST00000506896 KRT81Q14533 505 aa20.3■□□□□ 0.84
SNX25-204ENST00000506896 ELAVL3Q14576 367 aaKnown RBP20.3■□□□□ 0.84
SNX25-204ENST00000506896 ACCSLQ4AC99 568 aa20.3■□□□□ 0.84
SNX25-204ENST00000506896 C9orf64Q5T6V5 341 aa20.3■□□□□ 0.84
SNX25-204ENST00000506896 TXNRD3NBQ6F5E7 133 aa20.3■□□□□ 0.84
SNX25-204ENST00000506896 KIAA1324Q6UXG2 1013 aaKnown RBP20.3■□□□□ 0.84
SNX25-204ENST00000506896 PRR23CQ6ZRP0 262 aa20.3■□□□□ 0.84
SNX25-204ENST00000506896 FAM71BQ8TC56 605 aa20.3■□□□□ 0.84
SNX25-204ENST00000506896 FRS2Q8WU20 508 aa20.3■□□□□ 0.84
SNX25-204ENST00000506896 PTPRN2Q92932 1015 aa20.3■□□□□ 0.84
SNX25-204ENST00000506896 ERLEC1Q96DZ1 483 aa20.3■□□□□ 0.84
SNX25-204ENST00000506896 RSPH9Q9H1X1 276 aaPredicted RBP20.3■□□□□ 0.84
SNX25-204ENST00000506896 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.3■□□□□ 0.84
SNX25-204ENST00000506896 TNRC6BQ9UPQ9 1833 aaKnown RBP20.3■□□□□ 0.84
SNX25-204ENST00000506896 KDELR3O43731 214 aa20.29■□□□□ 0.84
SNX25-204ENST00000506896 SRCP12931 536 aa20.29■□□□□ 0.84
SNX25-204ENST00000506896 SERPINH1P50454 418 aaKnown RBP20.29■□□□□ 0.84
SNX25-204ENST00000506896 CDH6P55285 790 aa20.29■□□□□ 0.84
SNX25-204ENST00000506896 PDK2Q15119 407 aa20.29■□□□□ 0.84
SNX25-204ENST00000506896 DLG2Q15700 870 aa20.29■□□□□ 0.84
SNX25-204ENST00000506896 RSPO4Q2I0M5 234 aaPredicted RBP20.29■□□□□ 0.84
SNX25-204ENST00000506896 ZNF776Q68DI1 518 aaPredicted RBP20.29■□□□□ 0.84
SNX25-204ENST00000506896 SLC36A4Q6YBV0 504 aa20.29■□□□□ 0.84
SNX25-204ENST00000506896 MAP7D3Q8IWC1 876 aa20.29■□□□□ 0.84
SNX25-204ENST00000506896 LZTR1Q8N653 840 aa20.29■□□□□ 0.84
SNX25-204ENST00000506896 CCDC112Q8NEF3 446 aa20.29■□□□□ 0.84
SNX25-204ENST00000506896 CCDC114Q96M63 670 aa20.29■□□□□ 0.84
SNX25-204ENST00000506896 CEP44Q9C0F1 390 aa20.29■□□□□ 0.84
SNX25-204ENST00000506896 NOL6Q9H6R4 1146 aaKnown RBP20.29■□□□□ 0.84
SNX25-204ENST00000506896 PCDH18Q9HCL0 1135 aa20.29■□□□□ 0.84
SNX25-204ENST00000506896 USP36Q9P275 1121 aaKnown RBP20.29■□□□□ 0.84
SNX25-204ENST00000506896 SCML1Q9UN30 329 aa20.29■□□□□ 0.84
SNX25-204ENST00000506896 CACNA1AO00555 2505 aa20.28■□□□□ 0.84
SNX25-204ENST00000506896 BCLAF3A2AJT9 711 aaKnown RBP20.28■□□□□ 0.84
SNX25-204ENST00000506896 BTNL10A8MVZ5 291 aa20.28■□□□□ 0.84
SNX25-204ENST00000506896 RASA4BC9J798 803 aa20.28■□□□□ 0.84
SNX25-204ENST00000506896 RASA4O43374 803 aa20.28■□□□□ 0.84
SNX25-204ENST00000506896 FOXD2O60548 495 aaPredicted RBP20.28■□□□□ 0.84
SNX25-204ENST00000506896 MT-CO1P00395 513 aa20.28■□□□□ 0.84
SNX25-204ENST00000506896 GLDCP23378 1020 aa20.28■□□□□ 0.84
SNX25-204ENST00000506896 PI4KAP42356 2102 aa20.28■□□□□ 0.84
SNX25-204ENST00000506896 VAV2P52735 878 aa20.28■□□□□ 0.84
SNX25-204ENST00000506896 TAS2R40P59535 323 aa20.28■□□□□ 0.84
SNX25-204ENST00000506896 ARF5P84085 180 aa20.28■□□□□ 0.84
SNX25-204ENST00000506896 SFSWAPQ12872 951 aaKnown RBP20.28■□□□□ 0.84
SNX25-204ENST00000506896 PUM1Q14671 1186 aaKnown RBP eCLIP20.28■□□□□ 0.84
SNX25-204ENST00000506896 SPDYCQ5MJ68 293 aa20.28■□□□□ 0.84
SNX25-204ENST00000506896 LRRC38Q5VT99 294 aa20.28■□□□□ 0.84
SNX25-204ENST00000506896 LINGO4Q6UY18 593 aa20.28■□□□□ 0.84
SNX25-204ENST00000506896 DSG4Q86SJ6 1040 aa20.28■□□□□ 0.84
SNX25-204ENST00000506896 ZNF354CQ86Y25 554 aa20.28■□□□□ 0.84
SNX25-204ENST00000506896 KCTD6Q8NC69 237 aa20.28■□□□□ 0.84
SNX25-204ENST00000506896 CASKIN2Q8WXE0 1202 aa20.28■□□□□ 0.84
SNX25-204ENST00000506896 TSC1Q92574 1164 aa20.28■□□□□ 0.84
SNX25-204ENST00000506896 CSPG4P5Q96PW8 444 aa20.28■□□□□ 0.84
SNX25-204ENST00000506896 SLC6A17Q9H1V8 727 aa20.28■□□□□ 0.84
SNX25-204ENST00000506896 MTG2Q9H4K7 406 aa20.28■□□□□ 0.84
SNX25-204ENST00000506896 ITM2CQ9NQX7 267 aa20.28■□□□□ 0.84
SNX25-204ENST00000506896 FARP1Q9Y4F1 1045 aaPredicted RBP20.28■□□□□ 0.84
SNX25-204ENST00000506896 ALOX15BO15296 676 aa20.27■□□□□ 0.84
SNX25-204ENST00000506896 IGLV3-19P01714 112 aa20.27■□□□□ 0.84
SNX25-204ENST00000506896 DNTTP04053 509 aa20.27■□□□□ 0.84
SNX25-204ENST00000506896 OXTRP30559 389 aa20.27■□□□□ 0.84
SNX25-204ENST00000506896 MPLP40238 635 aa20.27■□□□□ 0.84
SNX25-204ENST00000506896 ARSEP51690 589 aa20.27■□□□□ 0.84
SNX25-204ENST00000506896 RPS14P62263 151 aaKnown RBP20.27■□□□□ 0.84
SNX25-204ENST00000506896 SERINC3Q13530 473 aa20.27■□□□□ 0.84
SNX25-204ENST00000506896 CCDC6Q16204 474 aa20.27■□□□□ 0.84
SNX25-204ENST00000506896 TTC31Q49AM3 519 aaPredicted RBP20.27■□□□□ 0.84
SNX25-204ENST00000506896 AFMIDQ63HM1 303 aa20.27■□□□□ 0.84
SNX25-204ENST00000506896 TMCO3Q6UWJ1 677 aa20.27■□□□□ 0.84
SNX25-204ENST00000506896 KIAA1328Q86T90 577 aa20.27■□□□□ 0.84
SNX25-204ENST00000506896 ISG20Q96AZ6 181 aaKnown RBP20.27■□□□□ 0.84
SNX25-204ENST00000506896 HMCESQ96FZ2 354 aa20.27■□□□□ 0.84
SNX25-204ENST00000506896 ZNF670Q9BS34 389 aa20.27■□□□□ 0.84
SNX25-204ENST00000506896 LRRC19Q9H756 370 aa20.27■□□□□ 0.84
SNX25-204ENST00000506896 REXO2Q9Y3B8 237 aaKnown RBP20.27■□□□□ 0.84
SNX25-204ENST00000506896 ARHGAP42A6NI28 874 aa20.26■□□□□ 0.83
SNX25-204ENST00000506896 PJA2O43164 708 aa20.26■□□□□ 0.83
SNX25-204ENST00000506896 MAP3K13O43283 966 aa20.26■□□□□ 0.83
SNX25-204ENST00000506896 SPOPO43791 374 aa20.26■□□□□ 0.83
SNX25-204ENST00000506896 SDHBP21912 280 aa20.26■□□□□ 0.83
SNX25-204ENST00000506896 SERPINB6P35237 376 aa20.26■□□□□ 0.83
SNX25-204ENST00000506896 GJC1P36383 396 aa20.26■□□□□ 0.83
SNX25-204ENST00000506896 RECQLP46063 649 aaPredicted RBP20.26■□□□□ 0.83
SNX25-204ENST00000506896 TPMTP51580 245 aa20.26■□□□□ 0.83
SNX25-204ENST00000506896 SF3A2Q15428 464 aaKnown RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms