RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 FITM2Q8N6M3 262 aa17.57■□□□□ 0.4
TRAPPC11-204ENST00000505676 AZIN2Q96A70 460 aa17.57■□□□□ 0.4
TRAPPC11-204ENST00000505676 RMDN2Q96LZ7 410 aa17.57■□□□□ 0.4
TRAPPC11-204ENST00000505676 FCRL3Q96P31 734 aaPredicted RBP17.57■□□□□ 0.4
TRAPPC11-204ENST00000505676 DEFB118Q96PH6 123 aa17.57■□□□□ 0.4
TRAPPC11-204ENST00000505676 FSD1LQ9BXM9 530 aa17.57■□□□□ 0.4
TRAPPC11-204ENST00000505676 FAM96AQ9H5X1 160 aa17.57■□□□□ 0.4
TRAPPC11-204ENST00000505676 AFF4Q9UHB7 1163 aaKnown RBP17.57■□□□□ 0.4
TRAPPC11-204ENST00000505676 MAFFQ9ULX9 164 aa17.57■□□□□ 0.4
TRAPPC11-204ENST00000505676 MYO18AQ92614 2054 aaKnown RBP17.57■□□□□ 0.4
TRAPPC11-204ENST00000505676 SLC12A8A0AV02 714 aa17.57■□□□□ 0.4
TRAPPC11-204ENST00000505676 WDR91A4D1P6 747 aa17.57■□□□□ 0.4
TRAPPC11-204ENST00000505676 TPP1O14773 563 aa17.57■□□□□ 0.4
TRAPPC11-204ENST00000505676 ATP9BO43861 1147 aa17.57■□□□□ 0.4
TRAPPC11-204ENST00000505676 ERVK-10P10266 1014 aa17.57■□□□□ 0.4
TRAPPC11-204ENST00000505676 TYK2P29597 1187 aa17.57■□□□□ 0.4
TRAPPC11-204ENST00000505676 PPP3CCP48454 512 aa17.57■□□□□ 0.4
TRAPPC11-204ENST00000505676 IL10RBQ08334 325 aa17.57■□□□□ 0.4
TRAPPC11-204ENST00000505676 LAMB3Q13751 1172 aa17.57■□□□□ 0.4
TRAPPC11-204ENST00000505676 SLC39A5Q6ZMH5 540 aa17.57■□□□□ 0.4
TRAPPC11-204ENST00000505676 CDHR3Q6ZTQ4 885 aa17.57■□□□□ 0.4
TRAPPC11-204ENST00000505676 CNTN4Q8IWV2 1026 aa17.57■□□□□ 0.4
TRAPPC11-204ENST00000505676 TEX26Q8N6G2 289 aa17.57■□□□□ 0.4
TRAPPC11-204ENST00000505676 ARMC2Q8NEN0 867 aa17.57■□□□□ 0.4
TRAPPC11-204ENST00000505676 SREK1Q8WXA9 508 aaKnown RBP17.57■□□□□ 0.4
TRAPPC11-204ENST00000505676 ZNF599Q96NL3 588 aa17.57■□□□□ 0.4
TRAPPC11-204ENST00000505676 RANBP9Q96S59 729 aa17.57■□□□□ 0.4
TRAPPC11-204ENST00000505676 SP110Q9HB58 689 aa17.57■□□□□ 0.4
TRAPPC11-204ENST00000505676 DNMT3LQ9UJW3 386 aa17.57■□□□□ 0.4
TRAPPC11-204ENST00000505676 ANKRD6Q9Y2G4 727 aa17.57■□□□□ 0.4
TRAPPC11-204ENST00000505676 USP12O75317 370 aa17.56■□□□□ 0.4
TRAPPC11-204ENST00000505676 RASSF9O75901 435 aa17.56■□□□□ 0.4
TRAPPC11-204ENST00000505676 HLA-DQB2P05538 268 aa17.56■□□□□ 0.4
TRAPPC11-204ENST00000505676 APOA4P06727 396 aa17.56■□□□□ 0.4
TRAPPC11-204ENST00000505676 GATMP50440 423 aa17.56■□□□□ 0.4
TRAPPC11-204ENST00000505676 BTG3Q14201 252 aaPredicted RBP17.56■□□□□ 0.4
TRAPPC11-204ENST00000505676 SLC14A2Q15849 920 aa17.56■□□□□ 0.4
TRAPPC11-204ENST00000505676 PSMD5Q16401 504 aa17.56■□□□□ 0.4
TRAPPC11-204ENST00000505676 FAM133BQ5BKY9 247 aaKnown RBP17.56■□□□□ 0.4
TRAPPC11-204ENST00000505676 FAM182AQ5T1J6 154 aa17.56■□□□□ 0.4
TRAPPC11-204ENST00000505676 CERCAMQ5T4B2 595 aa17.56■□□□□ 0.4
TRAPPC11-204ENST00000505676 MARC1Q5VT66 337 aa17.56■□□□□ 0.4
TRAPPC11-204ENST00000505676 ARHGAP36Q6ZRI8 547 aa17.56■□□□□ 0.4
TRAPPC11-204ENST00000505676 OTOP3Q7RTS5 596 aa17.56■□□□□ 0.4
TRAPPC11-204ENST00000505676 STRA8Q7Z7C7 330 aa17.56■□□□□ 0.4
TRAPPC11-204ENST00000505676 TTC9BQ8N6N2 239 aa17.56■□□□□ 0.4
TRAPPC11-204ENST00000505676 SAR1AQ9NR31 198 aa17.56■□□□□ 0.4
TRAPPC11-204ENST00000505676 C20orf96Q9NUD7 363 aaPredicted RBP17.56■□□□□ 0.4
TRAPPC11-204ENST00000505676 MPP6Q9NZW5 540 aa17.56■□□□□ 0.4
TRAPPC11-204ENST00000505676 NUDT5Q9UKK9 219 aa17.56■□□□□ 0.4
TRAPPC11-204ENST00000505676 FNDC1Q4ZHG4 1894 aaPredicted RBP17.56■□□□□ 0.4
TRAPPC11-204ENST00000505676 TLR5O60602 858 aa17.56■□□□□ 0.4
TRAPPC11-204ENST00000505676 VNN2O95498 520 aa17.56■□□□□ 0.4
TRAPPC11-204ENST00000505676 BGNP21810 368 aa17.56■□□□□ 0.4
TRAPPC11-204ENST00000505676 GRK2P25098 689 aa17.56■□□□□ 0.4
TRAPPC11-204ENST00000505676 ATP5C1P36542 298 aaKnown RBP17.56■□□□□ 0.4
TRAPPC11-204ENST00000505676 TMPRSS15P98073 1019 aa17.56■□□□□ 0.4
TRAPPC11-204ENST00000505676 DUSP4Q13115 394 aa17.56■□□□□ 0.4
TRAPPC11-204ENST00000505676 NLRP9Q7RTR0 991 aa17.56■□□□□ 0.4
TRAPPC11-204ENST00000505676 USP33Q8TEY7 942 aa17.56■□□□□ 0.4
TRAPPC11-204ENST00000505676 NOL6Q9H6R4 1146 aaKnown RBP17.56■□□□□ 0.4
TRAPPC11-204ENST00000505676 ECT2Q9H8V3 914 aa17.56■□□□□ 0.4
TRAPPC11-204ENST00000505676 KCNK4Q9NYG8 393 aa17.56■□□□□ 0.4
TRAPPC11-204ENST00000505676 STK39Q9UEW8 545 aa17.56■□□□□ 0.4
TRAPPC11-204ENST00000505676 CDY1Q9Y6F8 540 aa17.56■□□□□ 0.4
TRAPPC11-204ENST00000505676 RAMP2O60895 175 aa17.55■□□□□ 0.4
TRAPPC11-204ENST00000505676 DNAJC6O75061 913 aa17.55■□□□□ 0.4
TRAPPC11-204ENST00000505676 SIN3BO75182 1162 aa17.55■□□□□ 0.4
TRAPPC11-204ENST00000505676 UNC5CO95185 931 aa17.55■□□□□ 0.4
TRAPPC11-204ENST00000505676 CCL5P13501 91 aa17.55■□□□□ 0.4
TRAPPC11-204ENST00000505676 PDE1CQ14123 709 aaPredicted RBP17.55■□□□□ 0.4
TRAPPC11-204ENST00000505676 SPRED3Q2MJR0 410 aa17.55■□□□□ 0.4
TRAPPC11-204ENST00000505676 TMCO4Q5TGY1 634 aa17.55■□□□□ 0.4
TRAPPC11-204ENST00000505676 RASIP1Q5U651 963 aa17.55■□□□□ 0.4
TRAPPC11-204ENST00000505676 FBXL22Q6P050 247 aa17.55■□□□□ 0.4
TRAPPC11-204ENST00000505676 RANBP10Q6VN20 620 aa17.55■□□□□ 0.4
TRAPPC11-204ENST00000505676 GPR65Q8IYL9 337 aa17.55■□□□□ 0.4
TRAPPC11-204ENST00000505676 IPMKQ8NFU5 416 aa17.55■□□□□ 0.4
TRAPPC11-204ENST00000505676 PTPRN2Q92932 1015 aa17.55■□□□□ 0.4
TRAPPC11-204ENST00000505676 PLD4Q96BZ4 506 aa17.55■□□□□ 0.4
TRAPPC11-204ENST00000505676 IMP4Q96G21 291 aaKnown RBP17.55■□□□□ 0.4
TRAPPC11-204ENST00000505676 FAM167BQ9BTA0 163 aa17.55■□□□□ 0.4
TRAPPC11-204ENST00000505676 FICDQ9BVA6 458 aa17.55■□□□□ 0.4
TRAPPC11-204ENST00000505676 STN1Q9H668 368 aaKnown RBP17.55■□□□□ 0.4
TRAPPC11-204ENST00000505676 NPHS2Q9NP85 383 aa17.55■□□□□ 0.4
TRAPPC11-204ENST00000505676 THAP1Q9NVV9 213 aa17.55■□□□□ 0.4
TRAPPC11-204ENST00000505676 PIH1D1Q9NWS0 290 aaKnown RBP17.55■□□□□ 0.4
TRAPPC11-204ENST00000505676 SLC27A5Q9Y2P5 690 aa17.55■□□□□ 0.4
TRAPPC11-204ENST00000505676 TCAF1Q9Y4C2 921 aa17.55■□□□□ 0.4
TRAPPC11-204ENST00000505676 F5H5T6 163 aa17.55■□□□□ 0.4
TRAPPC11-204ENST00000505676 PLIN3O60664 434 aa17.55■□□□□ 0.4
TRAPPC11-204ENST00000505676 EFCAB14O75071 495 aa17.55■□□□□ 0.4
TRAPPC11-204ENST00000505676 H2AFYO75367 372 aaKnown RBP17.55■□□□□ 0.4
TRAPPC11-204ENST00000505676 PEX11BO96011 259 aa17.55■□□□□ 0.4
TRAPPC11-204ENST00000505676 SLC11A2P49281 568 aa17.55■□□□□ 0.4
TRAPPC11-204ENST00000505676 ARFIP2P53365 341 aa17.55■□□□□ 0.4
TRAPPC11-204ENST00000505676 NCALDP61601 193 aa17.55■□□□□ 0.4
TRAPPC11-204ENST00000505676 SLC20A2Q08357 652 aa17.55■□□□□ 0.4
TRAPPC11-204ENST00000505676 KIAA0930Q6ICG6 404 aaPredicted RBP17.55■□□□□ 0.4
TRAPPC11-204ENST00000505676 RSPO2Q6UXX9 243 aaPredicted RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 296.3 ms