RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 CAV1Q03135 178 aa10.61□□□□□ -0.71
TPM3-217ENST00000504663 IL10RBQ08334 325 aa10.61□□□□□ -0.71
TPM3-217ENST00000504663 SLC10A7Q0GE19 358 aa10.61□□□□□ -0.71
TPM3-217ENST00000504663 CASP8Q14790 479 aa10.61□□□□□ -0.71
TPM3-217ENST00000504663 FASTKD3Q14CZ7 662 aaKnown RBP10.61□□□□□ -0.71
TPM3-217ENST00000504663 POLD3Q15054 466 aaPredicted RBP10.61□□□□□ -0.71
TPM3-217ENST00000504663 FNBP1LQ5T0N5 605 aa10.61□□□□□ -0.71
TPM3-217ENST00000504663 MPP7Q5T2T1 576 aa10.61□□□□□ -0.71
TPM3-217ENST00000504663 ALG1LQ6GMV1 187 aa10.61□□□□□ -0.71
TPM3-217ENST00000504663 ELMSAN1Q6PJG2 1045 aa10.61□□□□□ -0.71
TPM3-217ENST00000504663 ZNF783Q6ZMS7 281 aa10.61□□□□□ -0.71
TPM3-217ENST00000504663 GET4Q7L5D6 327 aaPredicted RBP10.61□□□□□ -0.71
TPM3-217ENST00000504663 CAND1Q86VP6 1230 aaKnown RBP10.61□□□□□ -0.71
TPM3-217ENST00000504663 TMEM25Q86YD3 366 aa10.61□□□□□ -0.71
TPM3-217ENST00000504663 PPIL6Q8IXY8 311 aa10.61□□□□□ -0.71
TPM3-217ENST00000504663 TDRD5Q8NAT2 981 aaKnown RBP10.61□□□□□ -0.71
TPM3-217ENST00000504663 BBOF1Q8ND07 529 aa10.61□□□□□ -0.71
TPM3-217ENST00000504663 CCNYQ8ND76 341 aa10.61□□□□□ -0.71
TPM3-217ENST00000504663 USP33Q8TEY7 942 aa10.61□□□□□ -0.71
TPM3-217ENST00000504663 LRRC45Q96CN5 670 aa10.61□□□□□ -0.71
TPM3-217ENST00000504663 OXNAD1Q96HP4 312 aaPredicted RBP10.61□□□□□ -0.71
TPM3-217ENST00000504663 DDX50Q9BQ39 737 aaKnown RBP10.61□□□□□ -0.71
TPM3-217ENST00000504663 PHACTR1Q9C0D0 580 aa10.61□□□□□ -0.71
TPM3-217ENST00000504663 MAGEH1Q9H213 219 aa10.61□□□□□ -0.71
TPM3-217ENST00000504663 KIF9Q9HAQ2 790 aa10.61□□□□□ -0.71
TPM3-217ENST00000504663 PIDD1Q9HB75 910 aa10.61□□□□□ -0.71
TPM3-217ENST00000504663 ARFGAP3Q9NP61 516 aa10.61□□□□□ -0.71
TPM3-217ENST00000504663 EIF2B3Q9NR50 452 aaKnown RBP10.61□□□□□ -0.71
TPM3-217ENST00000504663 RAB6BQ9NRW1 208 aa10.61□□□□□ -0.71
TPM3-217ENST00000504663 FAM53CQ9NYF3 392 aa10.61□□□□□ -0.71
TPM3-217ENST00000504663 ANAPC5Q9UJX4 755 aa10.61□□□□□ -0.71
TPM3-217ENST00000504663 INTS6Q9UL03 887 aaKnown RBP10.61□□□□□ -0.71
TPM3-217ENST00000504663 HPCAL4Q9UM19 191 aa10.61□□□□□ -0.71
TPM3-217ENST00000504663 NFS1Q9Y697 457 aa10.61□□□□□ -0.71
TPM3-217ENST00000504663 WNT6Q9Y6F9 365 aa10.61□□□□□ -0.71
TPM3-217ENST00000504663 F5H423 210 aaPredicted RBP10.6□□□□□ -0.71
TPM3-217ENST00000504663 AGPSO00116 658 aa10.6□□□□□ -0.71
TPM3-217ENST00000504663 MTSS1O43312 755 aa10.6□□□□□ -0.71
TPM3-217ENST00000504663 SNAP91O60641 907 aa10.6□□□□□ -0.71
TPM3-217ENST00000504663 GJB3O75712 270 aa10.6□□□□□ -0.71
TPM3-217ENST00000504663 ZNF189O75820 626 aaPredicted RBP10.6□□□□□ -0.71
TPM3-217ENST00000504663 SUN1O94901 812 aa10.6□□□□□ -0.71
TPM3-217ENST00000504663 C1QAP02745 245 aa10.6□□□□□ -0.71
TPM3-217ENST00000504663 CYP17A1P05093 508 aa10.6□□□□□ -0.71
TPM3-217ENST00000504663 RHOCP08134 193 aa10.6□□□□□ -0.71
TPM3-217ENST00000504663 CCNB1P14635 433 aa10.6□□□□□ -0.71
TPM3-217ENST00000504663 HOXB8P17481 243 aaPredicted RBP10.6□□□□□ -0.71
TPM3-217ENST00000504663 HSD17B3P37058 310 aa10.6□□□□□ -0.71
TPM3-217ENST00000504663 FDFT1P37268 417 aa10.6□□□□□ -0.71
TPM3-217ENST00000504663 CSKP41240 450 aa10.6□□□□□ -0.71
TPM3-217ENST00000504663 NUMBP49757 651 aa10.6□□□□□ -0.71
TPM3-217ENST00000504663 BASP1P80723 227 aaKnown RBP10.6□□□□□ -0.71
TPM3-217ENST00000504663 NIPAL4Q0D2K0 466 aa10.6□□□□□ -0.71
TPM3-217ENST00000504663 LMAN2Q12907 356 aa10.6□□□□□ -0.71
TPM3-217ENST00000504663 CALCOCO2Q13137 446 aa10.6□□□□□ -0.71
TPM3-217ENST00000504663 OLIG2Q13516 323 aa10.6□□□□□ -0.71
TPM3-217ENST00000504663 HNRNPDQ14103 355 aaKnown RBP10.6□□□□□ -0.71
TPM3-217ENST00000504663 PARP6Q2NL67 630 aa10.6□□□□□ -0.71
TPM3-217ENST00000504663 EML3Q32P44 896 aa10.6□□□□□ -0.71
TPM3-217ENST00000504663 MAP9Q49MG5 647 aa10.6□□□□□ -0.71
TPM3-217ENST00000504663 SYCP2LQ5T4T6 812 aa10.6□□□□□ -0.71
TPM3-217ENST00000504663 C6orf118Q5T5N4 469 aa10.6□□□□□ -0.71
TPM3-217ENST00000504663 C4orf22Q6V702 233 aa10.6□□□□□ -0.71
TPM3-217ENST00000504663 OTOP3Q7RTS5 596 aa10.6□□□□□ -0.71
TPM3-217ENST00000504663 KIAA0907Q7Z7F0 614 aaPredicted RBP10.6□□□□□ -0.71
TPM3-217ENST00000504663 PRPF39Q86UA1 669 aaKnown RBP10.6□□□□□ -0.71
TPM3-217ENST00000504663 IGDCC3Q8IVU1 814 aa10.6□□□□□ -0.71
TPM3-217ENST00000504663 IQCKQ8N0W5 287 aa10.6□□□□□ -0.71
TPM3-217ENST00000504663 CELF5Q8N6W0 485 aaKnown RBP10.6□□□□□ -0.71
TPM3-217ENST00000504663 MCUQ8NE86 351 aa10.6□□□□□ -0.71
TPM3-217ENST00000504663 ARRDC2Q8TBH0 407 aa10.6□□□□□ -0.71
TPM3-217ENST00000504663 SUSD6Q92537 303 aa10.6□□□□□ -0.71
TPM3-217ENST00000504663 PPP2R3CQ969Q6 453 aa10.6□□□□□ -0.71
TPM3-217ENST00000504663 CHFRQ96EP1 664 aa10.6□□□□□ -0.71
TPM3-217ENST00000504663 LRCH3Q96II8 777 aa10.6□□□□□ -0.71
TPM3-217ENST00000504663 SERPINB12Q96P63 405 aa10.6□□□□□ -0.71
TPM3-217ENST00000504663 VAT1Q99536 393 aa10.6□□□□□ -0.71
TPM3-217ENST00000504663 CDC42EP4Q9H3Q1 356 aaKnown RBP10.6□□□□□ -0.71
TPM3-217ENST00000504663 DNAJC17Q9NVM6 304 aaKnown RBP10.6□□□□□ -0.71
TPM3-217ENST00000504663 NINJ2Q9NZG7 142 aa10.6□□□□□ -0.71
TPM3-217ENST00000504663 SEPT10Q9P0V9 454 aa10.6□□□□□ -0.71
TPM3-217ENST00000504663 TRHDEQ9UKU6 1024 aa10.6□□□□□ -0.71
TPM3-217ENST00000504663 EYSQ5T1H1 3165 aa10.59□□□□□ -0.71
TPM3-217ENST00000504663 ANKRD36A6QL64 1941 aa10.59□□□□□ -0.71
TPM3-217ENST00000504663 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.59□□□□□ -0.71
TPM3-217ENST00000504663 GOLGA8MH3BSY2 632 aa10.59□□□□□ -0.71
TPM3-217ENST00000504663 KDELR3O43731 214 aa10.59□□□□□ -0.71
TPM3-217ENST00000504663 CR2P20023 1033 aa10.59□□□□□ -0.71
TPM3-217ENST00000504663 HLA-FP30511 346 aa10.59□□□□□ -0.71
TPM3-217ENST00000504663 CD70P32970 193 aa10.59□□□□□ -0.71
TPM3-217ENST00000504663 ADRA1AP35348 466 aa10.59□□□□□ -0.71
TPM3-217ENST00000504663 RGRP47804 291 aa10.59□□□□□ -0.71
TPM3-217ENST00000504663 DHX9Q08211 1270 aaKnown RBP10.59□□□□□ -0.71
TPM3-217ENST00000504663 ZNF177Q13360 481 aaPredicted RBP10.59□□□□□ -0.71
TPM3-217ENST00000504663 MPPE1Q53F39 396 aa10.59□□□□□ -0.71
TPM3-217ENST00000504663 LY6G5CQ5SRR4 150 aa10.59□□□□□ -0.71
TPM3-217ENST00000504663 RNF219Q5W0B1 726 aaPredicted RBP10.59□□□□□ -0.71
TPM3-217ENST00000504663 TIGD7Q6NT04 549 aaPredicted RBP10.59□□□□□ -0.71
TPM3-217ENST00000504663 KDELC1Q6UW63 502 aa10.59□□□□□ -0.71
TPM3-217ENST00000504663 ARHGEF18Q6ZSZ5 1173 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms