RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 PRKAR1AP10644 381 aa12.89□□□□□ -0.35
LSM6-204ENST00000504181 P4HA1P13674 534 aa12.89□□□□□ -0.35
LSM6-204ENST00000504181 ZNF18P17022 549 aa12.89□□□□□ -0.35
LSM6-204ENST00000504181 NNMTP40261 264 aa12.89□□□□□ -0.35
LSM6-204ENST00000504181 HMGN5P82970 282 aaKnown RBP12.89□□□□□ -0.35
LSM6-204ENST00000504181 PDE1CQ14123 709 aaPredicted RBP12.89□□□□□ -0.35
LSM6-204ENST00000504181 TPRG1LQ5T0D9 272 aa12.89□□□□□ -0.35
LSM6-204ENST00000504181 PPP1R26Q5T8A7 1209 aaPredicted RBP12.89□□□□□ -0.35
LSM6-204ENST00000504181 PIP5KL1Q5T9C9 394 aa12.89□□□□□ -0.35
LSM6-204ENST00000504181 SEL1L3Q68CR1 1132 aa12.89□□□□□ -0.35
LSM6-204ENST00000504181 ESRP1Q6NXG1 681 aaKnown RBP12.89□□□□□ -0.35
LSM6-204ENST00000504181 KYAT3Q6YP21 454 aaKnown RBP12.89□□□□□ -0.35
LSM6-204ENST00000504181 CCDC117Q8IWD4 279 aaPredicted RBP12.89□□□□□ -0.35
LSM6-204ENST00000504181 IL22RA1Q8N6P7 574 aa12.89□□□□□ -0.35
LSM6-204ENST00000504181 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.89□□□□□ -0.35
LSM6-204ENST00000504181 EDEM1Q92611 657 aa12.89□□□□□ -0.35
LSM6-204ENST00000504181 LLPHQ9BRT6 129 aaKnown RBP12.89□□□□□ -0.35
LSM6-204ENST00000504181 PANK4Q9NVE7 773 aa12.89□□□□□ -0.35
LSM6-204ENST00000504181 APOBEC3BQ9UH17 382 aaKnown RBP12.89□□□□□ -0.35
LSM6-204ENST00000504181 DAAM1Q9Y4D1 1078 aa12.89□□□□□ -0.35
LSM6-204ENST00000504181 ZNF891A8MT65 544 aaPredicted RBP12.88□□□□□ -0.35
LSM6-204ENST00000504181 IRAK2O43187 625 aa12.88□□□□□ -0.35
LSM6-204ENST00000504181 DUX1O43812 170 aa12.88□□□□□ -0.35
LSM6-204ENST00000504181 ACSL4O60488 711 aa12.88□□□□□ -0.35
LSM6-204ENST00000504181 CNTN5O94779 1100 aa12.88□□□□□ -0.35
LSM6-204ENST00000504181 PCDH8O95206 1070 aa12.88□□□□□ -0.35
LSM6-204ENST00000504181 ANXA6P08133 673 aa12.88□□□□□ -0.35
LSM6-204ENST00000504181 NEK4P51957 841 aa12.88□□□□□ -0.35
LSM6-204ENST00000504181 PRRT3Q5FWE3 981 aa12.88□□□□□ -0.35
LSM6-204ENST00000504181 NADSYN1Q6IA69 706 aa12.88□□□□□ -0.35
LSM6-204ENST00000504181 SPOPLQ6IQ16 392 aa12.88□□□□□ -0.35
LSM6-204ENST00000504181 NEK5Q6P3R8 708 aa12.88□□□□□ -0.35
LSM6-204ENST00000504181 CFAP52Q8N1V2 620 aa12.88□□□□□ -0.35
LSM6-204ENST00000504181 FAM174AQ8TBP5 190 aa12.88□□□□□ -0.35
LSM6-204ENST00000504181 RNF139Q8WU17 664 aa12.88□□□□□ -0.35
LSM6-204ENST00000504181 FRS2Q8WU20 508 aa12.88□□□□□ -0.35
LSM6-204ENST00000504181 LRRN3Q9H3W5 708 aa12.88□□□□□ -0.35
LSM6-204ENST00000504181 DONSONQ9NYP3 566 aa12.88□□□□□ -0.35
LSM6-204ENST00000504181 SIRPGQ9P1W8 387 aa12.88□□□□□ -0.35
LSM6-204ENST00000504181 SPASTQ9UBP0 616 aa12.88□□□□□ -0.35
LSM6-204ENST00000504181 EFCAB7A8K855 629 aa12.87□□□□□ -0.35
LSM6-204ENST00000504181 K7EM74 188 aa12.87□□□□□ -0.35
LSM6-204ENST00000504181 NKX2-8O15522 239 aa12.87□□□□□ -0.35
LSM6-204ENST00000504181 SPINT1O43278 529 aa12.87□□□□□ -0.35
LSM6-204ENST00000504181 BNIP3LO60238 219 aa12.87□□□□□ -0.35
LSM6-204ENST00000504181 LUC7L3O95232 432 aaKnown RBP12.87□□□□□ -0.35
LSM6-204ENST00000504181 ZBED1O96006 694 aa12.87□□□□□ -0.35
LSM6-204ENST00000504181 HOXD13P35453 343 aa12.87□□□□□ -0.35
LSM6-204ENST00000504181 LONP1P36776 959 aaKnown RBP12.87□□□□□ -0.35
LSM6-204ENST00000504181 ASPAP45381 313 aa12.87□□□□□ -0.35
LSM6-204ENST00000504181 SLC11A2P49281 568 aa12.87□□□□□ -0.35
LSM6-204ENST00000504181 TKTL1P51854 596 aa12.87□□□□□ -0.35
LSM6-204ENST00000504181 ANAPC15P60006 121 aa12.87□□□□□ -0.35
LSM6-204ENST00000504181 EIF2B5Q13144 721 aaKnown RBP12.87□□□□□ -0.35
LSM6-204ENST00000504181 ACCSLQ4AC99 568 aa12.87□□□□□ -0.35
LSM6-204ENST00000504181 RAB41Q5JT25 222 aa12.87□□□□□ -0.35
LSM6-204ENST00000504181 TMEM164Q5U3C3 297 aa12.87□□□□□ -0.35
LSM6-204ENST00000504181 SV2BQ7L1I2 683 aa12.87□□□□□ -0.35
LSM6-204ENST00000504181 CENPQQ7L2Z9 268 aaPredicted RBP12.87□□□□□ -0.35
LSM6-204ENST00000504181 BHLHA9Q7RTU4 235 aa12.87□□□□□ -0.35
LSM6-204ENST00000504181 KYQ8NBH2 561 aa12.87□□□□□ -0.35
LSM6-204ENST00000504181 PLEKHO2Q8TD55 490 aa12.87□□□□□ -0.35
LSM6-204ENST00000504181 BTN2A2Q8WVV5 523 aa12.87□□□□□ -0.35
LSM6-204ENST00000504181 TMEM159Q96B96 161 aa12.87□□□□□ -0.35
LSM6-204ENST00000504181 EPSTI1Q96J88 318 aa12.87□□□□□ -0.35
LSM6-204ENST00000504181 CMKLR1Q99788 373 aa12.87□□□□□ -0.35
LSM6-204ENST00000504181 LRRC61Q9BV99 259 aa12.87□□□□□ -0.35
LSM6-204ENST00000504181 NT5C1AQ9BXI3 368 aa12.87□□□□□ -0.35
LSM6-204ENST00000504181 IRX2Q9BZI1 471 aaPredicted RBP12.87□□□□□ -0.35
LSM6-204ENST00000504181 ULBP1Q9BZM6 244 aa12.87□□□□□ -0.35
LSM6-204ENST00000504181 PRDM8Q9NQV8 689 aa12.87□□□□□ -0.35
LSM6-204ENST00000504181 DKK3Q9UBP4 350 aa12.87□□□□□ -0.35
LSM6-204ENST00000504181 STK17AQ9UEE5 414 aa12.87□□□□□ -0.35
LSM6-204ENST00000504181 PPM1HQ9ULR3 514 aa12.87□□□□□ -0.35
LSM6-204ENST00000504181 HS3ST3A1Q9Y663 406 aa12.87□□□□□ -0.35
LSM6-204ENST00000504181 FRMD3A2A2Y4 597 aa12.86□□□□□ -0.35
LSM6-204ENST00000504181 LMO7DNF2Z398 122 aa12.86□□□□□ -0.35
LSM6-204ENST00000504181 RAD51BO15315 384 aa12.86□□□□□ -0.35
LSM6-204ENST00000504181 YY2O15391 372 aa12.86□□□□□ -0.35
LSM6-204ENST00000504181 RABIFP47224 123 aa12.86□□□□□ -0.35
LSM6-204ENST00000504181 SEPT6Q14141 434 aa12.86□□□□□ -0.35
LSM6-204ENST00000504181 DEFB109BQ30KR1 87 aa12.86□□□□□ -0.35
LSM6-204ENST00000504181 PHF19Q5T6S3 580 aa12.86□□□□□ -0.35
LSM6-204ENST00000504181 Q6ZVU0 165 aa12.86□□□□□ -0.35
LSM6-204ENST00000504181 PIGZQ86VD9 579 aa12.86□□□□□ -0.35
LSM6-204ENST00000504181 XXYLT1Q8NBI6 393 aa12.86□□□□□ -0.35
LSM6-204ENST00000504181 CPT1CQ8TCG5 803 aa12.86□□□□□ -0.35
LSM6-204ENST00000504181 GPBAR1Q8TDU6 330 aa12.86□□□□□ -0.35
LSM6-204ENST00000504181 APOBEC4Q8WW27 367 aaKnown RBP12.86□□□□□ -0.35
LSM6-204ENST00000504181 HEXIM2Q96MH2 286 aaKnown RBP12.86□□□□□ -0.35
LSM6-204ENST00000504181 CLPBQ9H078 707 aa12.86□□□□□ -0.35
LSM6-204ENST00000504181 AGPAT3Q9NRZ7 376 aa12.86□□□□□ -0.35
LSM6-204ENST00000504181 CROCCQ5TZA2 2017 aa12.86□□□□□ -0.35
LSM6-204ENST00000504181 MTORP42345 2549 aa12.85□□□□□ -0.35
LSM6-204ENST00000504181 TTLL8A6PVC2 850 aa12.85□□□□□ -0.35
LSM6-204ENST00000504181 LRRIQ3A6PVS8 624 aaPredicted RBP12.85□□□□□ -0.35
LSM6-204ENST00000504181 C4BPAP04003 597 aaKnown RBP12.85□□□□□ -0.35
LSM6-204ENST00000504181 CELA2BP08218 269 aaPredicted RBP12.85□□□□□ -0.35
LSM6-204ENST00000504181 CD58P19256 250 aa12.85□□□□□ -0.35
LSM6-204ENST00000504181 ARSDP51689 593 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms