RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 PCDH18Q9HCL0 1135 aa18.62■□□□□ 0.57
PDLIM7-209ENST00000503346 LUC7LQ9NQ29 371 aaKnown RBP18.62■□□□□ 0.57
PDLIM7-209ENST00000503346 WSB2Q9NYS7 404 aaPredicted RBP18.62■□□□□ 0.57
PDLIM7-209ENST00000503346 RCOR3Q9P2K3 495 aaPredicted RBP18.62■□□□□ 0.57
PDLIM7-209ENST00000503346 HPCAL4Q9UM19 191 aa18.62■□□□□ 0.57
PDLIM7-209ENST00000503346 PCDHGA5Q9Y5G8 931 aa18.62■□□□□ 0.57
PDLIM7-209ENST00000503346 EML5Q05BV3 1969 aa18.61■□□□□ 0.57
PDLIM7-209ENST00000503346 ZSCAN5CA6NGD5 496 aaPredicted RBP18.61■□□□□ 0.57
PDLIM7-209ENST00000503346 ALOX15BO15296 676 aa18.61■□□□□ 0.57
PDLIM7-209ENST00000503346 LRP3O75074 770 aa18.61■□□□□ 0.57
PDLIM7-209ENST00000503346 ARSEP51690 589 aa18.61■□□□□ 0.57
PDLIM7-209ENST00000503346 HADHBP55084 474 aaKnown RBP18.61■□□□□ 0.57
PDLIM7-209ENST00000503346 GEMIN4P57678 1058 aaKnown RBP18.61■□□□□ 0.57
PDLIM7-209ENST00000503346 TAS2R40P59535 323 aa18.61■□□□□ 0.57
PDLIM7-209ENST00000503346 TTC31Q49AM3 519 aaPredicted RBP18.61■□□□□ 0.57
PDLIM7-209ENST00000503346 AFMIDQ63HM1 303 aa18.61■□□□□ 0.57
PDLIM7-209ENST00000503346 C22orf39Q6P5X5 142 aa18.61■□□□□ 0.57
PDLIM7-209ENST00000503346 RAD9BQ6WBX8 426 aa18.61■□□□□ 0.57
PDLIM7-209ENST00000503346 TMEM139Q8IV31 216 aa18.61■□□□□ 0.57
PDLIM7-209ENST00000503346 MMAAQ8IVH4 418 aaKnown RBP18.61■□□□□ 0.57
PDLIM7-209ENST00000503346 OR8D1Q8WZ84 308 aa18.61■□□□□ 0.57
PDLIM7-209ENST00000503346 TSC1Q92574 1164 aa18.61■□□□□ 0.57
PDLIM7-209ENST00000503346 TOE1Q96GM8 510 aaKnown RBP18.61■□□□□ 0.57
PDLIM7-209ENST00000503346 CSPG4P5Q96PW8 444 aa18.61■□□□□ 0.57
PDLIM7-209ENST00000503346 PABPC3Q9H361 631 aaKnown RBP18.61■□□□□ 0.57
PDLIM7-209ENST00000503346 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.6■□□□□ 0.57
PDLIM7-209ENST00000503346 A0A0A6YYK5 440 aaPredicted RBP18.6■□□□□ 0.57
PDLIM7-209ENST00000503346 TMEM110-MUSTN1A8MSY1 372 aa18.6■□□□□ 0.57
PDLIM7-209ENST00000503346 GOLGA6L6A8MZA4 724 aa18.6■□□□□ 0.57
PDLIM7-209ENST00000503346 MCF2LO15068 1137 aa18.6■□□□□ 0.57
PDLIM7-209ENST00000503346 ZNF821O75541 412 aaPredicted RBP18.6■□□□□ 0.57
PDLIM7-209ENST00000503346 IPO7O95373 1038 aaKnown RBP18.6■□□□□ 0.57
PDLIM7-209ENST00000503346 ADH1BP00325 375 aa18.6■□□□□ 0.57
PDLIM7-209ENST00000503346 KRT7P08729 469 aa18.6■□□□□ 0.57
PDLIM7-209ENST00000503346 RPL6Q02878 288 aaKnown RBP18.6■□□□□ 0.57
PDLIM7-209ENST00000503346 SFSWAPQ12872 951 aaKnown RBP18.6■□□□□ 0.57
PDLIM7-209ENST00000503346 SERINC3Q13530 473 aa18.6■□□□□ 0.57
PDLIM7-209ENST00000503346 USP30Q70CQ3 517 aa18.6■□□□□ 0.57
PDLIM7-209ENST00000503346 DSG4Q86SJ6 1040 aa18.6■□□□□ 0.57
PDLIM7-209ENST00000503346 ARHGAP12Q8IWW6 846 aa18.6■□□□□ 0.57
PDLIM7-209ENST00000503346 TMEFF1Q8IYR6 380 aa18.6■□□□□ 0.57
PDLIM7-209ENST00000503346 DCLK2Q8N568 766 aa18.6■□□□□ 0.57
PDLIM7-209ENST00000503346 LZTR1Q8N653 840 aa18.6■□□□□ 0.57
PDLIM7-209ENST00000503346 PCDH20Q8N6Y1 951 aaKnown RBP18.6■□□□□ 0.57
PDLIM7-209ENST00000503346 OR2A12Q8NGT7 310 aa18.6■□□□□ 0.57
PDLIM7-209ENST00000503346 ISG20Q96AZ6 181 aaKnown RBP18.6■□□□□ 0.57
PDLIM7-209ENST00000503346 CCDC114Q96M63 670 aa18.6■□□□□ 0.57
PDLIM7-209ENST00000503346 HINFPQ9BQA5 517 aa18.6■□□□□ 0.57
PDLIM7-209ENST00000503346 ACTL7AQ9Y615 435 aa18.6■□□□□ 0.57
PDLIM7-209ENST00000503346 OTOGLQ3ZCN5 2332 aa18.59■□□□□ 0.57
PDLIM7-209ENST00000503346 MID1O15344 667 aa18.59■□□□□ 0.57
PDLIM7-209ENST00000503346 C5AR1P21730 350 aa18.59■□□□□ 0.57
PDLIM7-209ENST00000503346 TGM1P22735 817 aa18.59■□□□□ 0.57
PDLIM7-209ENST00000503346 IL4RP24394 825 aa18.59■□□□□ 0.57
PDLIM7-209ENST00000503346 SLC8A1P32418 973 aa18.59■□□□□ 0.57
PDLIM7-209ENST00000503346 SLC1A1P43005 524 aa18.59■□□□□ 0.57
PDLIM7-209ENST00000503346 PSMD8P48556 350 aa18.59■□□□□ 0.57
PDLIM7-209ENST00000503346 CDH6P55285 790 aa18.59■□□□□ 0.57
PDLIM7-209ENST00000503346 KRT81Q14533 505 aa18.59■□□□□ 0.57
PDLIM7-209ENST00000503346 ATP13A4Q4VNC1 1196 aa18.59■□□□□ 0.57
PDLIM7-209ENST00000503346 PLPP6Q8IY26 295 aa18.59■□□□□ 0.57
PDLIM7-209ENST00000503346 NPWQ8N729 165 aa18.59■□□□□ 0.57
PDLIM7-209ENST00000503346 CASKIN2Q8WXE0 1202 aa18.59■□□□□ 0.57
PDLIM7-209ENST00000503346 ZNF419Q96HQ0 510 aaPredicted RBP18.59■□□□□ 0.57
PDLIM7-209ENST00000503346 CELF6Q96J87 481 aaKnown RBP18.59■□□□□ 0.57
PDLIM7-209ENST00000503346 SLC39A8Q9C0K1 460 aa18.59■□□□□ 0.57
PDLIM7-209ENST00000503346 PPM1HQ9ULR3 514 aa18.59■□□□□ 0.57
PDLIM7-209ENST00000503346 FCF1Q9Y324 198 aaKnown RBP18.59■□□□□ 0.57
PDLIM7-209ENST00000503346 REXO2Q9Y3B8 237 aaKnown RBP18.59■□□□□ 0.57
PDLIM7-209ENST00000503346 FARP1Q9Y4F1 1045 aaPredicted RBP18.59■□□□□ 0.57
PDLIM7-209ENST00000503346 BCLAF3A2AJT9 711 aaKnown RBP18.58■□□□□ 0.56
PDLIM7-209ENST00000503346 ARHGAP42A6NI28 874 aa18.58■□□□□ 0.56
PDLIM7-209ENST00000503346 BUB1O43683 1085 aa18.58■□□□□ 0.56
PDLIM7-209ENST00000503346 NDUFS2O75306 463 aa18.58■□□□□ 0.56
PDLIM7-209ENST00000503346 IL1BP01584 269 aa18.58■□□□□ 0.56
PDLIM7-209ENST00000503346 CD48P09326 243 aa18.58■□□□□ 0.56
PDLIM7-209ENST00000503346 AMPD1P23109 780 aa18.58■□□□□ 0.56
PDLIM7-209ENST00000503346 PTGER3P43115 390 aa18.58■□□□□ 0.56
PDLIM7-209ENST00000503346 DHPSP49366 369 aaPredicted RBP18.58■□□□□ 0.56
PDLIM7-209ENST00000503346 GSDMDP57764 484 aa18.58■□□□□ 0.56
PDLIM7-209ENST00000503346 PDK2Q15119 407 aa18.58■□□□□ 0.56
PDLIM7-209ENST00000503346 INO80DQ53TQ3 878 aaPredicted RBP18.58■□□□□ 0.56
PDLIM7-209ENST00000503346 PLA2G2CQ5R387 149 aa18.58■□□□□ 0.56
PDLIM7-209ENST00000503346 LRRC38Q5VT99 294 aa18.58■□□□□ 0.56
PDLIM7-209ENST00000503346 FAM46CQ5VWP2 391 aa18.58■□□□□ 0.56
PDLIM7-209ENST00000503346 ZNF354CQ86Y25 554 aa18.58■□□□□ 0.56
PDLIM7-209ENST00000503346 GPR161Q8N6U8 529 aaKnown RBP18.58■□□□□ 0.56
PDLIM7-209ENST00000503346 CADM4Q8NFZ8 388 aa18.58■□□□□ 0.56
PDLIM7-209ENST00000503346 ARRDC1-AS1Q9H2J1 176 aa18.58■□□□□ 0.56
PDLIM7-209ENST00000503346 TNKS2Q9H2K2 1166 aa18.58■□□□□ 0.56
PDLIM7-209ENST00000503346 PDFQ9HBH1 243 aa18.58■□□□□ 0.56
PDLIM7-209ENST00000503346 SGK2Q9HBY8 427 aa18.58■□□□□ 0.56
PDLIM7-209ENST00000503346 FBXL12Q9NXK8 326 aa18.58■□□□□ 0.56
PDLIM7-209ENST00000503346 TFR2Q9UP52 801 aa18.58■□□□□ 0.56
PDLIM7-209ENST00000503346 NCKAP1Q9Y2A7 1128 aa18.58■□□□□ 0.56
PDLIM7-209ENST00000503346 PLXND1Q9Y4D7 1925 aa18.58■□□□□ 0.56
PDLIM7-209ENST00000503346 C1QTNF3-AMACRE9PGA6 284 aa18.57■□□□□ 0.56
PDLIM7-209ENST00000503346 BNIP3LO60238 219 aa18.57■□□□□ 0.56
PDLIM7-209ENST00000503346 CHRNA3P32297 505 aa18.57■□□□□ 0.56
PDLIM7-209ENST00000503346 GJC1P36383 396 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms