RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 TNKS2Q9H2K2 1166 aa16.65■□□□□ 0.26
SCLT1-204ENST00000503215 CA5BQ9Y2D0 317 aa16.65■□□□□ 0.26
SCLT1-204ENST00000503215 FAM221BA6H8Z2 402 aa16.64■□□□□ 0.26
SCLT1-204ENST00000503215 LGALS16A8MUM7 142 aa16.64■□□□□ 0.26
SCLT1-204ENST00000503215 FAM72CH0Y354 149 aa16.64■□□□□ 0.26
SCLT1-204ENST00000503215 FLRT2O43155 660 aa16.64■□□□□ 0.26
SCLT1-204ENST00000503215 LATO43561 262 aa16.64■□□□□ 0.26
SCLT1-204ENST00000503215 ZNF821O75541 412 aaPredicted RBP16.64■□□□□ 0.26
SCLT1-204ENST00000503215 ZMPSTE24O75844 475 aa16.64■□□□□ 0.26
SCLT1-204ENST00000503215 TRIM16O95361 564 aa16.64■□□□□ 0.26
SCLT1-204ENST00000503215 UNGP13051 313 aaPredicted RBP16.64■□□□□ 0.26
SCLT1-204ENST00000503215 OR1E1P30953 314 aa16.64■□□□□ 0.26
SCLT1-204ENST00000503215 C21orf59P57076 290 aa16.64■□□□□ 0.26
SCLT1-204ENST00000503215 FAM72AQ5TYM5 149 aa16.64■□□□□ 0.26
SCLT1-204ENST00000503215 FAM72DQ6L9T8 149 aa16.64■□□□□ 0.26
SCLT1-204ENST00000503215 SASS6Q6UVJ0 657 aa16.64■□□□□ 0.26
SCLT1-204ENST00000503215 ARCQ7LC44 396 aa16.64■□□□□ 0.26
SCLT1-204ENST00000503215 SETD3Q86TU7 594 aaPredicted RBP16.64■□□□□ 0.26
SCLT1-204ENST00000503215 FAM72BQ86X60 149 aa16.64■□□□□ 0.26
SCLT1-204ENST00000503215 ZNF677Q86XU0 584 aa16.64■□□□□ 0.26
SCLT1-204ENST00000503215 MSANTD4Q8NCY6 345 aa16.64■□□□□ 0.26
SCLT1-204ENST00000503215 ARRDC3Q96B67 414 aa16.64■□□□□ 0.26
SCLT1-204ENST00000503215 GBP4Q96PP9 640 aa16.64■□□□□ 0.26
SCLT1-204ENST00000503215 CAAP1Q9H8G2 361 aa16.64■□□□□ 0.26
SCLT1-204ENST00000503215 NDFIP2Q9NV92 336 aa16.64■□□□□ 0.26
SCLT1-204ENST00000503215 ANO10Q9NW15 660 aa16.64■□□□□ 0.26
SCLT1-204ENST00000503215 ZFHX4Q86UP3 3567 aa16.64■□□□□ 0.25
SCLT1-204ENST00000503215 A0A1B0GTQ1 180 aa16.64■□□□□ 0.25
SCLT1-204ENST00000503215 C2CD4BA6NLJ0 364 aa16.64■□□□□ 0.25
SCLT1-204ENST00000503215 PLRG1O43660 514 aaKnown RBP16.64■□□□□ 0.25
SCLT1-204ENST00000503215 PCDHGA12O60330 932 aa16.64■□□□□ 0.25
SCLT1-204ENST00000503215 ATP1A3P13637 1013 aa16.64■□□□□ 0.25
SCLT1-204ENST00000503215 CD38P28907 300 aa16.64■□□□□ 0.25
SCLT1-204ENST00000503215 CHRNA3P32297 505 aa16.64■□□□□ 0.25
SCLT1-204ENST00000503215 ADRA1BP35368 520 aa16.64■□□□□ 0.25
SCLT1-204ENST00000503215 STAT1P42224 750 aa16.64■□□□□ 0.25
SCLT1-204ENST00000503215 CCT8P50990 548 aa16.64■□□□□ 0.25
SCLT1-204ENST00000503215 KRT83P78385 493 aa16.64■□□□□ 0.25
SCLT1-204ENST00000503215 MYL5Q02045 173 aa16.64■□□□□ 0.25
SCLT1-204ENST00000503215 UBXN1Q04323 297 aa16.64■□□□□ 0.25
SCLT1-204ENST00000503215 STX1AQ16623 288 aa16.64■□□□□ 0.25
SCLT1-204ENST00000503215 PIP5KL1Q5T9C9 394 aa16.64■□□□□ 0.25
SCLT1-204ENST00000503215 FAM46CQ5VWP2 391 aa16.64■□□□□ 0.25
SCLT1-204ENST00000503215 DSG4Q86SJ6 1040 aa16.64■□□□□ 0.25
SCLT1-204ENST00000503215 SPATS2Q86XZ4 545 aaKnown RBP16.64■□□□□ 0.25
SCLT1-204ENST00000503215 DRC7Q8IY82 874 aa16.64■□□□□ 0.25
SCLT1-204ENST00000503215 DCAF4L2Q8NA75 395 aa16.64■□□□□ 0.25
SCLT1-204ENST00000503215 PCMTD1Q96MG8 357 aaPredicted RBP16.64■□□□□ 0.25
SCLT1-204ENST00000503215 C2orf49Q9BVC5 232 aaPredicted RBP16.64■□□□□ 0.25
SCLT1-204ENST00000503215 PAXBP1Q9Y5B6 917 aa16.64■□□□□ 0.25
SCLT1-204ENST00000503215 DMXL2Q8TDJ6 3036 aa16.63■□□□□ 0.25
SCLT1-204ENST00000503215 ILVBLA1L0T0 632 aa16.63■□□□□ 0.25
SCLT1-204ENST00000503215 LRRC10BA6NIK2 292 aa16.63■□□□□ 0.25
SCLT1-204ENST00000503215 CBX4O00257 560 aa16.63■□□□□ 0.25
SCLT1-204ENST00000503215 CD160O95971 181 aa16.63■□□□□ 0.25
SCLT1-204ENST00000503215 CAPNS1P04632 268 aa16.63■□□□□ 0.25
SCLT1-204ENST00000503215 TPM2P07951 284 aa16.63■□□□□ 0.25
SCLT1-204ENST00000503215 RFC1P35251 1148 aaPredicted RBP16.63■□□□□ 0.25
SCLT1-204ENST00000503215 ACVRL1P37023 503 aa16.63■□□□□ 0.25
SCLT1-204ENST00000503215 SUZ12Q15022 739 aaKnown RBP16.63■□□□□ 0.25
SCLT1-204ENST00000503215 CLEC16AQ2KHT3 1053 aa16.63■□□□□ 0.25
SCLT1-204ENST00000503215 ARSIQ5FYB1 569 aa16.63■□□□□ 0.25
SCLT1-204ENST00000503215 C6orf118Q5T5N4 469 aa16.63■□□□□ 0.25
SCLT1-204ENST00000503215 CCDC185Q8N715 623 aa16.63■□□□□ 0.25
SCLT1-204ENST00000503215 ZCCHC14Q8WYQ9 949 aaKnown RBP16.63■□□□□ 0.25
SCLT1-204ENST00000503215 KLK6Q92876 244 aa16.63■□□□□ 0.25
SCLT1-204ENST00000503215 ELF4Q99607 663 aaPredicted RBP16.63■□□□□ 0.25
SCLT1-204ENST00000503215 ZYG11BQ9C0D3 744 aa16.63■□□□□ 0.25
SCLT1-204ENST00000503215 APOBEC2Q9Y235 224 aaKnown RBP16.63■□□□□ 0.25
SCLT1-204ENST00000503215 WDFY3Q8IZQ1 3526 aa16.63■□□□□ 0.25
SCLT1-204ENST00000503215 DOCK4Q8N1I0 1966 aa16.62■□□□□ 0.25
SCLT1-204ENST00000503215 CHD6Q8TD26 2715 aa16.62■□□□□ 0.25
SCLT1-204ENST00000503215 PLXNB3Q9ULL4 1909 aa16.62■□□□□ 0.25
SCLT1-204ENST00000503215 C1QTNF3-AMACRE9PGA6 284 aa16.62■□□□□ 0.25
SCLT1-204ENST00000503215 TLR4O00206 839 aa16.62■□□□□ 0.25
SCLT1-204ENST00000503215 TAF4O00268 1085 aa16.62■□□□□ 0.25
SCLT1-204ENST00000503215 KPNA3O00505 521 aaPredicted RBP16.62■□□□□ 0.25
SCLT1-204ENST00000503215 ALOX15BO15296 676 aa16.62■□□□□ 0.25
SCLT1-204ENST00000503215 SLC7A4O43246 635 aa16.62■□□□□ 0.25
SCLT1-204ENST00000503215 DKK1O94907 266 aa16.62■□□□□ 0.25
SCLT1-204ENST00000503215 HDAC4P56524 1084 aa16.62■□□□□ 0.25
SCLT1-204ENST00000503215 ARF5P84085 180 aa16.62■□□□□ 0.25
SCLT1-204ENST00000503215 GNA12Q03113 381 aa16.62■□□□□ 0.25
SCLT1-204ENST00000503215 CCDC157Q569K6 752 aa16.62■□□□□ 0.25
SCLT1-204ENST00000503215 MANEALQ5VSG8 457 aa16.62■□□□□ 0.25
SCLT1-204ENST00000503215 C22orf39Q6P5X5 142 aa16.62■□□□□ 0.25
SCLT1-204ENST00000503215 CCNI2Q6ZMN8 369 aaPredicted RBP16.62■□□□□ 0.25
SCLT1-204ENST00000503215 TRIM72Q6ZMU5 477 aa16.62■□□□□ 0.25
SCLT1-204ENST00000503215 DPY19L3Q6ZPD9 716 aa16.62■□□□□ 0.25
SCLT1-204ENST00000503215 PRPF39Q86UA1 669 aaKnown RBP16.62■□□□□ 0.25
SCLT1-204ENST00000503215 NEK11Q8NG66 645 aa16.62■□□□□ 0.25
SCLT1-204ENST00000503215 GRIN3AQ8TCU5 1115 aa16.62■□□□□ 0.25
SCLT1-204ENST00000503215 CENPIQ92674 756 aaPredicted RBP16.62■□□□□ 0.25
SCLT1-204ENST00000503215 ERGIC2Q96RQ1 377 aa16.62■□□□□ 0.25
SCLT1-204ENST00000503215 CDC6Q99741 560 aa16.62■□□□□ 0.25
SCLT1-204ENST00000503215 MYOCQ99972 504 aa16.62■□□□□ 0.25
SCLT1-204ENST00000503215 ATP13A1Q9HD20 1204 aa16.62■□□□□ 0.25
SCLT1-204ENST00000503215 ADAM22Q9P0K1 906 aa16.62■□□□□ 0.25
SCLT1-204ENST00000503215 OR12D3Q9UGF7 316 aa16.62■□□□□ 0.25
SCLT1-204ENST00000503215 NEU3Q9UQ49 428 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms