RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 WASH4PA8MWX3 477 aa13.08□□□□□ -0.32
HSPG2-213ENST00000498495 FGF10O15520 208 aaPredicted RBP13.08□□□□□ -0.32
HSPG2-213ENST00000498495 SMAD6O43541 496 aaKnown RBP13.08□□□□□ -0.32
HSPG2-213ENST00000498495 KDELR3O43731 214 aa13.08□□□□□ -0.32
HSPG2-213ENST00000498495 RNASEH2AO75792 299 aaKnown RBP13.08□□□□□ -0.32
HSPG2-213ENST00000498495 ZMPSTE24O75844 475 aa13.08□□□□□ -0.32
HSPG2-213ENST00000498495 ADH1BP00325 375 aa13.08□□□□□ -0.32
HSPG2-213ENST00000498495 MAOBP27338 520 aa13.08□□□□□ -0.32
HSPG2-213ENST00000498495 RECQLP46063 649 aaPredicted RBP13.08□□□□□ -0.32
HSPG2-213ENST00000498495 ID4P47928 161 aa13.08□□□□□ -0.32
HSPG2-213ENST00000498495 ZNF75DP51815 510 aa13.08□□□□□ -0.32
HSPG2-213ENST00000498495 GEMIN4P57678 1058 aaKnown RBP13.08□□□□□ -0.32
HSPG2-213ENST00000498495 YBEYP58557 167 aaPredicted RBP13.08□□□□□ -0.32
HSPG2-213ENST00000498495 ARF5P84085 180 aa13.08□□□□□ -0.32
HSPG2-213ENST00000498495 SEMA3BQ13214 749 aa13.08□□□□□ -0.32
HSPG2-213ENST00000498495 CA9Q16790 459 aa13.08□□□□□ -0.32
HSPG2-213ENST00000498495 DUOXA1Q1HG43 343 aa13.08□□□□□ -0.32
HSPG2-213ENST00000498495 RSPO4Q2I0M5 234 aaPredicted RBP13.08□□□□□ -0.32
HSPG2-213ENST00000498495 PPP6R3Q5H9R7 873 aaPredicted RBP13.08□□□□□ -0.32
HSPG2-213ENST00000498495 DCAF12L1Q5VU92 463 aa13.08□□□□□ -0.32
HSPG2-213ENST00000498495 HDDC3Q8N4P3 179 aa13.08□□□□□ -0.32
HSPG2-213ENST00000498495 CEP76Q8TAP6 659 aa13.08□□□□□ -0.32
HSPG2-213ENST00000498495 ZNF564Q8TBZ8 553 aaPredicted RBP13.08□□□□□ -0.32
HSPG2-213ENST00000498495 BTBD6Q96KE9 485 aa13.08□□□□□ -0.32
HSPG2-213ENST00000498495 NUSAP1Q9BXS6 441 aaKnown RBP13.08□□□□□ -0.32
HSPG2-213ENST00000498495 NEUROG2Q9H2A3 272 aa13.08□□□□□ -0.32
HSPG2-213ENST00000498495 NENFQ9UMX5 172 aa13.08□□□□□ -0.32
HSPG2-213ENST00000498495 NEU3Q9UQ49 428 aa13.08□□□□□ -0.32
HSPG2-213ENST00000498495 VPS13AQ96RL7 3174 aa13.08□□□□□ -0.32
HSPG2-213ENST00000498495 DOCK4Q8N1I0 1966 aa13.08□□□□□ -0.32
HSPG2-213ENST00000498495 SPAG17Q6Q759 2223 aa13.08□□□□□ -0.32
HSPG2-213ENST00000498495 CXorf51AA0A1B0GTR3 108 aa13.07□□□□□ -0.32
HSPG2-213ENST00000498495 FAM47DPA6NHR8 397 aa13.07□□□□□ -0.32
HSPG2-213ENST00000498495 PATE3B3GLJ2 98 aa13.07□□□□□ -0.32
HSPG2-213ENST00000498495 C1QTNF3-AMACRE9PGA6 284 aa13.07□□□□□ -0.32
HSPG2-213ENST00000498495 ALOX15BO15296 676 aa13.07□□□□□ -0.32
HSPG2-213ENST00000498495 SEMA4FO95754 770 aa13.07□□□□□ -0.32
HSPG2-213ENST00000498495 TMEM253P0C7T8 217 aa13.07□□□□□ -0.32
HSPG2-213ENST00000498495 GNSP15586 552 aa13.07□□□□□ -0.32
HSPG2-213ENST00000498495 GOT1P17174 413 aa13.07□□□□□ -0.32
HSPG2-213ENST00000498495 HOXD12P35452 270 aa13.07□□□□□ -0.32
HSPG2-213ENST00000498495 SSR1P43307 286 aaKnown RBP13.07□□□□□ -0.32
HSPG2-213ENST00000498495 SERPINH1P50454 418 aaKnown RBP13.07□□□□□ -0.32
HSPG2-213ENST00000498495 DNA2P51530 1060 aa13.07□□□□□ -0.32
HSPG2-213ENST00000498495 ZNF135P52742 658 aaPredicted RBP13.07□□□□□ -0.32
HSPG2-213ENST00000498495 IRX4P78413 519 aa13.07□□□□□ -0.32
HSPG2-213ENST00000498495 HADHQ16836 314 aaKnown RBP13.07□□□□□ -0.32
HSPG2-213ENST00000498495 TRIM61Q5EBN2 209 aa13.07□□□□□ -0.32
HSPG2-213ENST00000498495 KCNT1Q5JUK3 1230 aa13.07□□□□□ -0.32
HSPG2-213ENST00000498495 DAB2IPQ5VWQ8 1189 aa13.07□□□□□ -0.32
HSPG2-213ENST00000498495 TCEAL6Q6IPX3 200 aa13.07□□□□□ -0.32
HSPG2-213ENST00000498495 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.07□□□□□ -0.32
HSPG2-213ENST00000498495 RABEPKQ7Z6M1 372 aa13.07□□□□□ -0.32
HSPG2-213ENST00000498495 NIPA2Q8N8Q9 360 aa13.07□□□□□ -0.32
HSPG2-213ENST00000498495 OR2A12Q8NGT7 310 aa13.07□□□□□ -0.32
HSPG2-213ENST00000498495 HSPH1Q92598 858 aa13.07□□□□□ -0.32
HSPG2-213ENST00000498495 TCEAL3Q969E4 200 aa13.07□□□□□ -0.32
HSPG2-213ENST00000498495 MRFAP1L1Q96HT8 127 aa13.07□□□□□ -0.32
HSPG2-213ENST00000498495 KCTD15Q96SI1 283 aaPredicted RBP13.07□□□□□ -0.32
HSPG2-213ENST00000498495 PACSIN1Q9BY11 444 aa13.07□□□□□ -0.32
HSPG2-213ENST00000498495 CEP44Q9C0F1 390 aa13.07□□□□□ -0.32
HSPG2-213ENST00000498495 PCED1AQ9H1Q7 454 aa13.07□□□□□ -0.32
HSPG2-213ENST00000498495 TNKS2Q9H2K2 1166 aa13.07□□□□□ -0.32
HSPG2-213ENST00000498495 ZWILCHQ9H900 591 aa13.07□□□□□ -0.32
HSPG2-213ENST00000498495 SPTLC3Q9NUV7 552 aa13.07□□□□□ -0.32
HSPG2-213ENST00000498495 UVRAGQ9P2Y5 699 aa13.07□□□□□ -0.32
HSPG2-213ENST00000498495 SUSD2Q9UGT4 822 aa13.07□□□□□ -0.32
HSPG2-213ENST00000498495 PPM1HQ9ULR3 514 aa13.07□□□□□ -0.32
HSPG2-213ENST00000498495 PLXND1Q9Y4D7 1925 aa13.07□□□□□ -0.32
HSPG2-213ENST00000498495 ATXN2Q99700 1313 aaKnown RBP13.07□□□□□ -0.32
HSPG2-213ENST00000498495 FAM186AA6NE01 2351 aa13.07□□□□□ -0.32
HSPG2-213ENST00000498495 ZSCAN5CA6NGD5 496 aaPredicted RBP13.06□□□□□ -0.32
HSPG2-213ENST00000498495 LRRC72A6NJI9 287 aa13.06□□□□□ -0.32
HSPG2-213ENST00000498495 RASA4BC9J798 803 aa13.06□□□□□ -0.32
HSPG2-213ENST00000498495 RASA4O43374 803 aa13.06□□□□□ -0.32
HSPG2-213ENST00000498495 BUB1O43683 1085 aa13.06□□□□□ -0.32
HSPG2-213ENST00000498495 GDF9O60383 454 aa13.06□□□□□ -0.32
HSPG2-213ENST00000498495 CFIP05156 583 aa13.06□□□□□ -0.32
HSPG2-213ENST00000498495 RARAP10276 462 aa13.06□□□□□ -0.32
HSPG2-213ENST00000498495 ERCC2P18074 760 aa13.06□□□□□ -0.32
HSPG2-213ENST00000498495 IL1R2P27930 398 aa13.06□□□□□ -0.32
HSPG2-213ENST00000498495 CHRNA3P32297 505 aa13.06□□□□□ -0.32
HSPG2-213ENST00000498495 HCAR3P49019 387 aa13.06□□□□□ -0.32
HSPG2-213ENST00000498495 NDST2P52849 883 aa13.06□□□□□ -0.32
HSPG2-213ENST00000498495 CCDC15Q0P6D6 951 aa13.06□□□□□ -0.32
HSPG2-213ENST00000498495 SMTNL2Q2TAL5 461 aa13.06□□□□□ -0.32
HSPG2-213ENST00000498495 PARP15Q460N3 678 aa13.06□□□□□ -0.32
HSPG2-213ENST00000498495 CARD16Q5EG05 197 aa13.06□□□□□ -0.32
HSPG2-213ENST00000498495 PEAR1Q5VY43 1037 aaPredicted RBP13.06□□□□□ -0.32
HSPG2-213ENST00000498495 C22orf39Q6P5X5 142 aa13.06□□□□□ -0.32
HSPG2-213ENST00000498495 SLC23A3Q6PIS1 610 aa13.06□□□□□ -0.32
HSPG2-213ENST00000498495 RFX8Q6ZV50 586 aa13.06□□□□□ -0.32
HSPG2-213ENST00000498495 CYP4V2Q6ZWL3 525 aaPredicted RBP13.06□□□□□ -0.32
HSPG2-213ENST00000498495 UMODL1-AS1Q8N2C9 162 aa13.06□□□□□ -0.32
HSPG2-213ENST00000498495 AADATQ8N5Z0 425 aa13.06□□□□□ -0.32
HSPG2-213ENST00000498495 PCDH20Q8N6Y1 951 aaKnown RBP13.06□□□□□ -0.32
HSPG2-213ENST00000498495 TC2NQ8N9U0 490 aa13.06□□□□□ -0.32
HSPG2-213ENST00000498495 OR14C36Q8NHC7 312 aa13.06□□□□□ -0.32
HSPG2-213ENST00000498495 PIP4K2CQ8TBX8 421 aa13.06□□□□□ -0.32
HSPG2-213ENST00000498495 NETO1Q8TDF5 533 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms