RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 RBP3P10745 1247 aa13.84□□□□□ -0.19
CPNE1-227ENST00000498056 VAV1P15498 845 aa13.84□□□□□ -0.19
CPNE1-227ENST00000498056 TIE1P35590 1138 aa13.84□□□□□ -0.19
CPNE1-227ENST00000498056 SERPINH1P50454 418 aaKnown RBP13.84□□□□□ -0.19
CPNE1-227ENST00000498056 GEMIN4P57678 1058 aaKnown RBP13.84□□□□□ -0.19
CPNE1-227ENST00000498056 ST8SIA6P61647 398 aa13.84□□□□□ -0.19
CPNE1-227ENST00000498056 CKAP4Q07065 602 aaKnown RBP13.84□□□□□ -0.19
CPNE1-227ENST00000498056 IL10RBQ08334 325 aa13.84□□□□□ -0.19
CPNE1-227ENST00000498056 SIGLEC14Q08ET2 396 aa13.84□□□□□ -0.19
CPNE1-227ENST00000498056 LRRC32Q14392 662 aa13.84□□□□□ -0.19
CPNE1-227ENST00000498056 ZNF235Q14590 738 aa13.84□□□□□ -0.19
CPNE1-227ENST00000498056 PRKD1Q15139 912 aaPredicted RBP13.84□□□□□ -0.19
CPNE1-227ENST00000498056 SIX1Q15475 284 aaPredicted RBP13.84□□□□□ -0.19
CPNE1-227ENST00000498056 SLC45A4Q5BKX6 768 aa13.84□□□□□ -0.19
CPNE1-227ENST00000498056 TMCO4Q5TGY1 634 aa13.84□□□□□ -0.19
CPNE1-227ENST00000498056 HEATR6Q6AI08 1181 aaKnown RBP13.84□□□□□ -0.19
CPNE1-227ENST00000498056 C22orf39Q6P5X5 142 aa13.84□□□□□ -0.19
CPNE1-227ENST00000498056 CREG2Q8IUH2 290 aa13.84□□□□□ -0.19
CPNE1-227ENST00000498056 ZNF366Q8N895 744 aa13.84□□□□□ -0.19
CPNE1-227ENST00000498056 ATP11CQ8NB49 1132 aa13.84□□□□□ -0.19
CPNE1-227ENST00000498056 FLCNQ8NFG4 579 aa13.84□□□□□ -0.19
CPNE1-227ENST00000498056 TTC17Q96AE7 1141 aa13.84□□□□□ -0.19
CPNE1-227ENST00000498056 CINPQ9BW66 212 aaPredicted RBP13.84□□□□□ -0.19
CPNE1-227ENST00000498056 C10orf88Q9H8K7 445 aa13.84□□□□□ -0.19
CPNE1-227ENST00000498056 DNPEPQ9ULA0 475 aa13.84□□□□□ -0.19
CPNE1-227ENST00000498056 ERVW-1Q9UQF0 538 aa13.84□□□□□ -0.19
CPNE1-227ENST00000498056 FCF1Q9Y324 198 aaKnown RBP13.84□□□□□ -0.19
CPNE1-227ENST00000498056 ANTXRLA6NF34 631 aa13.83□□□□□ -0.2
CPNE1-227ENST00000498056 HACD1B0YJ81 288 aa13.83□□□□□ -0.2
CPNE1-227ENST00000498056 K7EQS6 105 aa13.83□□□□□ -0.2
CPNE1-227ENST00000498056 KCNK1O00180 336 aa13.83□□□□□ -0.2
CPNE1-227ENST00000498056 ZMPSTE24O75844 475 aa13.83□□□□□ -0.2
CPNE1-227ENST00000498056 TMCC1O94876 653 aa13.83□□□□□ -0.2
CPNE1-227ENST00000498056 SRCP12931 536 aa13.83□□□□□ -0.2
CPNE1-227ENST00000498056 TNFRSF4P43489 277 aa13.83□□□□□ -0.2
CPNE1-227ENST00000498056 CLCN6P51797 869 aa13.83□□□□□ -0.2
CPNE1-227ENST00000498056 STARD6P59095 220 aa13.83□□□□□ -0.2
CPNE1-227ENST00000498056 XRCC4Q13426 336 aa13.83□□□□□ -0.2
CPNE1-227ENST00000498056 CCINQ13939 588 aa13.83□□□□□ -0.2
CPNE1-227ENST00000498056 ZNF234Q14588 700 aa13.83□□□□□ -0.2
CPNE1-227ENST00000498056 C2orf27AQ580R0 203 aa13.83□□□□□ -0.2
CPNE1-227ENST00000498056 DARS2Q6PI48 645 aaKnown RBP13.83□□□□□ -0.2
CPNE1-227ENST00000498056 SERPINA13PQ6UXR4 307 aa13.83□□□□□ -0.2
CPNE1-227ENST00000498056 Q6ZS52 159 aa13.83□□□□□ -0.2
CPNE1-227ENST00000498056 LRRC49Q8IUZ0 686 aa13.83□□□□□ -0.2
CPNE1-227ENST00000498056 CHPFQ8IZ52 775 aa13.83□□□□□ -0.2
CPNE1-227ENST00000498056 EXOC2Q96KP1 924 aa13.83□□□□□ -0.2
CPNE1-227ENST00000498056 CEP41Q9BYV8 373 aa13.83□□□□□ -0.2
CPNE1-227ENST00000498056 FRMD8P1Q9BZ68 369 aaPredicted RBP13.83□□□□□ -0.2
CPNE1-227ENST00000498056 TM6SF2Q9BZW4 377 aa13.83□□□□□ -0.2
CPNE1-227ENST00000498056 CACNA2D2Q9NY47 1150 aa13.83□□□□□ -0.2
CPNE1-227ENST00000498056 CDC23Q9UJX2 597 aa13.83□□□□□ -0.2
CPNE1-227ENST00000498056 MRFAP1Q9Y605 127 aa13.83□□□□□ -0.2
CPNE1-227ENST00000498056 K7ERQ8 282 aa13.82□□□□□ -0.2
CPNE1-227ENST00000498056 SGK1O00141 431 aa13.82□□□□□ -0.2
CPNE1-227ENST00000498056 RNF103O00237 685 aa13.82□□□□□ -0.2
CPNE1-227ENST00000498056 PDE2AO00408 941 aaPredicted RBP13.82□□□□□ -0.2
CPNE1-227ENST00000498056 KCNN4O15554 427 aa13.82□□□□□ -0.2
CPNE1-227ENST00000498056 BNIP3LO60238 219 aa13.82□□□□□ -0.2
CPNE1-227ENST00000498056 PHF2O75151 1096 aa13.82□□□□□ -0.2
CPNE1-227ENST00000498056 MT-CO1P00395 513 aa13.82□□□□□ -0.2
CPNE1-227ENST00000498056 SRPRAP08240 638 aaKnown RBP13.82□□□□□ -0.2
CPNE1-227ENST00000498056 CCNCP24863 283 aa13.82□□□□□ -0.2
CPNE1-227ENST00000498056 RBL1P28749 1068 aa13.82□□□□□ -0.2
CPNE1-227ENST00000498056 NNMTP40261 264 aa13.82□□□□□ -0.2
CPNE1-227ENST00000498056 WASP42768 502 aa13.82□□□□□ -0.2
CPNE1-227ENST00000498056 RHOAP61586 193 aa13.82□□□□□ -0.2
CPNE1-227ENST00000498056 C2orf54Q08AI8 447 aa13.82□□□□□ -0.2
CPNE1-227ENST00000498056 ZBTB17Q13105 803 aa13.82□□□□□ -0.2
CPNE1-227ENST00000498056 BYSLQ13895 437 aaKnown RBP13.82□□□□□ -0.2
CPNE1-227ENST00000498056 LBRQ14739 615 aaKnown RBP13.82□□□□□ -0.2
CPNE1-227ENST00000498056 PTPRNQ16849 979 aa13.82□□□□□ -0.2
CPNE1-227ENST00000498056 ACCSLQ4AC99 568 aa13.82□□□□□ -0.2
CPNE1-227ENST00000498056 FBXO43Q4G163 708 aa13.82□□□□□ -0.2
CPNE1-227ENST00000498056 EMC10Q5UCC4 262 aa13.82□□□□□ -0.2
CPNE1-227ENST00000498056 TRMT11Q7Z4G4 463 aaKnown RBP13.82□□□□□ -0.2
CPNE1-227ENST00000498056 BBS5Q8N3I7 341 aa13.82□□□□□ -0.2
CPNE1-227ENST00000498056 SH2D3CQ8N5H7 860 aa13.82□□□□□ -0.2
CPNE1-227ENST00000498056 PRELID2Q8N945 189 aa13.82□□□□□ -0.2
CPNE1-227ENST00000498056 PJA1Q8NG27 643 aa13.82□□□□□ -0.2
CPNE1-227ENST00000498056 RPLP0P6Q8NHW5 317 aa13.82□□□□□ -0.2
CPNE1-227ENST00000498056 SLC35B2Q8TB61 432 aa13.82□□□□□ -0.2
CPNE1-227ENST00000498056 EDAQ92838 391 aa13.82□□□□□ -0.2
CPNE1-227ENST00000498056 ERLEC1Q96DZ1 483 aa13.82□□□□□ -0.2
CPNE1-227ENST00000498056 MRGPRX3Q96LB0 322 aa13.82□□□□□ -0.2
CPNE1-227ENST00000498056 FERMT1Q9BQL6 677 aa13.82□□□□□ -0.2
CPNE1-227ENST00000498056 TMEM121Q9BTD3 319 aa13.82□□□□□ -0.2
CPNE1-227ENST00000498056 BRD8Q9H0E9 1235 aa13.82□□□□□ -0.2
CPNE1-227ENST00000498056 RNF14Q9UBS8 474 aa13.82□□□□□ -0.2
CPNE1-227ENST00000498056 PLA2G4CQ9UP65 541 aa13.82□□□□□ -0.2
CPNE1-227ENST00000498056 SLC8A2Q9UPR5 921 aa13.82□□□□□ -0.2
CPNE1-227ENST00000498056 HS3ST2Q9Y278 367 aa13.82□□□□□ -0.2
CPNE1-227ENST00000498056 MTF2Q9Y483 593 aaPredicted RBP13.82□□□□□ -0.2
CPNE1-227ENST00000498056 EML5Q05BV3 1969 aa13.82□□□□□ -0.2
CPNE1-227ENST00000498056 FAM170BA6NMN3 283 aa13.81□□□□□ -0.2
CPNE1-227ENST00000498056 TIMM44O43615 452 aa13.81□□□□□ -0.2
CPNE1-227ENST00000498056 STK10O94804 968 aaKnown RBP13.81□□□□□ -0.2
CPNE1-227ENST00000498056 KLF8O95600 359 aaPredicted RBP13.81□□□□□ -0.2
CPNE1-227ENST00000498056 EPHX1P07099 455 aa13.81□□□□□ -0.2
CPNE1-227ENST00000498056 ALADP13716 330 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms