RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 INTUQ9ULD6 942 aa11.51□□□□□ -0.57
ERCC8-208ENST00000497892 CEP192Q8TEP8 1941 aa11.5□□□□□ -0.57
ERCC8-208ENST00000497892 THADAQ6YHU6 1953 aa11.5□□□□□ -0.57
ERCC8-208ENST00000497892 ABCA7Q8IZY2 2146 aa11.5□□□□□ -0.57
ERCC8-208ENST00000497892 IGHV1OR15-9A0A0B4J2B8 117 aa11.5□□□□□ -0.57
ERCC8-208ENST00000497892 CXorf51AA0A1B0GTR3 108 aa11.5□□□□□ -0.57
ERCC8-208ENST00000497892 TARSL2A2RTX5 802 aaKnown RBP11.5□□□□□ -0.57
ERCC8-208ENST00000497892 WASH4PA8MWX3 477 aa11.5□□□□□ -0.57
ERCC8-208ENST00000497892 EEF2KO00418 725 aaKnown RBP11.5□□□□□ -0.57
ERCC8-208ENST00000497892 ATP9BO43861 1147 aa11.5□□□□□ -0.57
ERCC8-208ENST00000497892 SNAP91O60641 907 aa11.5□□□□□ -0.57
ERCC8-208ENST00000497892 RAMP2O60895 175 aa11.5□□□□□ -0.57
ERCC8-208ENST00000497892 ZMPSTE24O75844 475 aa11.5□□□□□ -0.57
ERCC8-208ENST00000497892 IGLV3-19P01714 112 aa11.5□□□□□ -0.57
ERCC8-208ENST00000497892 SRCP12931 536 aa11.5□□□□□ -0.57
ERCC8-208ENST00000497892 BCKDHBP21953 392 aa11.5□□□□□ -0.57
ERCC8-208ENST00000497892 MAN1A1P33908 653 aa11.5□□□□□ -0.57
ERCC8-208ENST00000497892 NNMTP40261 264 aa11.5□□□□□ -0.57
ERCC8-208ENST00000497892 ARF5P84085 180 aa11.5□□□□□ -0.57
ERCC8-208ENST00000497892 ELAVL3Q14576 367 aaKnown RBP11.5□□□□□ -0.57
ERCC8-208ENST00000497892 TCEAL1Q15170 157 aa11.5□□□□□ -0.57
ERCC8-208ENST00000497892 ELF2Q15723 593 aa11.5□□□□□ -0.57
ERCC8-208ENST00000497892 LPAL2Q16609 132 aa11.5□□□□□ -0.57
ERCC8-208ENST00000497892 SMTNL2Q2TAL5 461 aa11.5□□□□□ -0.57
ERCC8-208ENST00000497892 PLK5Q496M5 336 aa11.5□□□□□ -0.57
ERCC8-208ENST00000497892 BOLA3Q53S33 107 aa11.5□□□□□ -0.57
ERCC8-208ENST00000497892 PPP6R3Q5H9R7 873 aaPredicted RBP11.5□□□□□ -0.57
ERCC8-208ENST00000497892 KCNT1Q5JUK3 1230 aa11.5□□□□□ -0.57
ERCC8-208ENST00000497892 C9orf64Q5T6V5 341 aa11.5□□□□□ -0.57
ERCC8-208ENST00000497892 PMS2CLQ68D20 193 aa11.5□□□□□ -0.57
ERCC8-208ENST00000497892 RFX8Q6ZV50 586 aa11.5□□□□□ -0.57
ERCC8-208ENST00000497892 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.5□□□□□ -0.57
ERCC8-208ENST00000497892 CACUL1Q86Y37 369 aa11.5□□□□□ -0.57
ERCC8-208ENST00000497892 RHOT2Q8IXI1 618 aa11.5□□□□□ -0.57
ERCC8-208ENST00000497892 UMODL1-AS1Q8N2C9 162 aa11.5□□□□□ -0.57
ERCC8-208ENST00000497892 SH2D3CQ8N5H7 860 aa11.5□□□□□ -0.57
ERCC8-208ENST00000497892 FRMD1Q8N878 549 aa11.5□□□□□ -0.57
ERCC8-208ENST00000497892 TEKT4Q8WW24 435 aa11.5□□□□□ -0.57
ERCC8-208ENST00000497892 RLN3Q8WXF3 142 aa11.5□□□□□ -0.57
ERCC8-208ENST00000497892 RUBCNQ92622 972 aa11.5□□□□□ -0.57
ERCC8-208ENST00000497892 PRCCQ92733 491 aaPredicted RBP11.5□□□□□ -0.57
ERCC8-208ENST00000497892 PTPRN2Q92932 1015 aa11.5□□□□□ -0.57
ERCC8-208ENST00000497892 SIPA1Q96FS4 1042 aa11.5□□□□□ -0.57
ERCC8-208ENST00000497892 KCTD15Q96SI1 283 aaPredicted RBP11.5□□□□□ -0.57
ERCC8-208ENST00000497892 ACE2Q9BYF1 805 aaPredicted RBP11.5□□□□□ -0.57
ERCC8-208ENST00000497892 DUSP15Q9H1R2 295 aaPredicted RBP11.5□□□□□ -0.57
ERCC8-208ENST00000497892 MAGEH1Q9H213 219 aa11.5□□□□□ -0.57
ERCC8-208ENST00000497892 NOL6Q9H6R4 1146 aaKnown RBP11.5□□□□□ -0.57
ERCC8-208ENST00000497892 CD93Q9NPY3 652 aa11.5□□□□□ -0.57
ERCC8-208ENST00000497892 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.5□□□□□ -0.57
ERCC8-208ENST00000497892 MBD1Q9UIS9 605 aaPredicted RBP11.5□□□□□ -0.57
ERCC8-208ENST00000497892 INVSQ9Y283 1065 aa11.5□□□□□ -0.57
ERCC8-208ENST00000497892 NUP205Q92621 2012 aa11.49□□□□□ -0.57
ERCC8-208ENST00000497892 SOWAHDA6NJG2 315 aa11.49□□□□□ -0.57
ERCC8-208ENST00000497892 CBX4O00257 560 aa11.49□□□□□ -0.57
ERCC8-208ENST00000497892 MT-CO1P00395 513 aa11.49□□□□□ -0.57
ERCC8-208ENST00000497892 RARAP10276 462 aa11.49□□□□□ -0.57
ERCC8-208ENST00000497892 VAV1P15498 845 aa11.49□□□□□ -0.57
ERCC8-208ENST00000497892 GOT1P17174 413 aa11.49□□□□□ -0.57
ERCC8-208ENST00000497892 GLDCP23378 1020 aa11.49□□□□□ -0.57
ERCC8-208ENST00000497892 CYLC1P35663 651 aaPredicted RBP11.49□□□□□ -0.57
ERCC8-208ENST00000497892 ACVRL1P37023 503 aa11.49□□□□□ -0.57
ERCC8-208ENST00000497892 HCAR3P49019 387 aa11.49□□□□□ -0.57
ERCC8-208ENST00000497892 SERPINH1P50454 418 aaKnown RBP11.49□□□□□ -0.57
ERCC8-208ENST00000497892 MMP16P51512 607 aa11.49□□□□□ -0.57
ERCC8-208ENST00000497892 TPMTP51580 245 aa11.49□□□□□ -0.57
ERCC8-208ENST00000497892 YBEYP58557 167 aaPredicted RBP11.49□□□□□ -0.57
ERCC8-208ENST00000497892 RPS14P62263 151 aaKnown RBP11.49□□□□□ -0.57
ERCC8-208ENST00000497892 ZBTB16Q05516 673 aa11.49□□□□□ -0.57
ERCC8-208ENST00000497892 PARP15Q460N3 678 aa11.49□□□□□ -0.57
ERCC8-208ENST00000497892 ZNF776Q68DI1 518 aaPredicted RBP11.49□□□□□ -0.57
ERCC8-208ENST00000497892 IL31Q6EBC2 164 aa11.49□□□□□ -0.57
ERCC8-208ENST00000497892 TXNRD3NBQ6F5E7 133 aa11.49□□□□□ -0.57
ERCC8-208ENST00000497892 RETSATQ6NUM9 610 aa11.49□□□□□ -0.57
ERCC8-208ENST00000497892 LINGO4Q6UY18 593 aa11.49□□□□□ -0.57
ERCC8-208ENST00000497892 ALYREFQ86V81 257 aaKnown RBP11.49□□□□□ -0.57
ERCC8-208ENST00000497892 TMTC1Q8IUR5 882 aa11.49□□□□□ -0.57
ERCC8-208ENST00000497892 SLC35G2Q8TBE7 412 aa11.49□□□□□ -0.57
ERCC8-208ENST00000497892 ARHGEF2Q92974 986 aaKnown RBP11.49□□□□□ -0.57
ERCC8-208ENST00000497892 LOXL4Q96JB6 756 aa11.49□□□□□ -0.57
ERCC8-208ENST00000497892 SPON2Q9BUD6 331 aa11.49□□□□□ -0.57
ERCC8-208ENST00000497892 ZWILCHQ9H900 591 aa11.49□□□□□ -0.57
ERCC8-208ENST00000497892 ITM2CQ9NQX7 267 aa11.49□□□□□ -0.57
ERCC8-208ENST00000497892 DONSONQ9NYP3 566 aa11.49□□□□□ -0.57
ERCC8-208ENST00000497892 NCDNQ9UBB6 729 aa11.49□□□□□ -0.57
ERCC8-208ENST00000497892 CYP8B1Q9UNU6 501 aa11.49□□□□□ -0.57
ERCC8-208ENST00000497892 SDK1Q7Z5N4 2213 aa11.49□□□□□ -0.57
ERCC8-208ENST00000497892 PTPRZ1P23471 2315 aaPredicted RBP11.48□□□□□ -0.57
ERCC8-208ENST00000497892 H3BRJ5 948 aa11.48□□□□□ -0.57
ERCC8-208ENST00000497892 K7ERQ8 282 aa11.48□□□□□ -0.57
ERCC8-208ENST00000497892 ALOX15BO15296 676 aa11.48□□□□□ -0.57
ERCC8-208ENST00000497892 SMAD6O43541 496 aaKnown RBP11.48□□□□□ -0.57
ERCC8-208ENST00000497892 RHOBTB1O94844 696 aa11.48□□□□□ -0.57
ERCC8-208ENST00000497892 EPN2O95208 641 aa11.48□□□□□ -0.57
ERCC8-208ENST00000497892 NDUFA10O95299 355 aa11.48□□□□□ -0.57
ERCC8-208ENST00000497892 RETP07949 1114 aa11.48□□□□□ -0.57
ERCC8-208ENST00000497892 ACADMP11310 421 aa11.48□□□□□ -0.57
ERCC8-208ENST00000497892 MAGEA1P43355 309 aa11.48□□□□□ -0.57
ERCC8-208ENST00000497892 HADHBP55084 474 aaKnown RBP11.48□□□□□ -0.57
ERCC8-208ENST00000497892 GEMIN4P57678 1058 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms