RNA–Protein interactions for RNA: ENST00000497870.1

PLS3-208, Transcript of plastin 3, human

TSL 4

Gene PLS3, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLS3-208	ENST00000497870	KRBA2	Q6ZNG9	492 aa		4.27	□□□□□ -1.73
PLS3-208	ENST00000497870	TMEM200A	Q86VY9	491 aa		4.27	□□□□□ -1.73
PLS3-208	ENST00000497870	FAM47B	Q8NA70	645 aa		4.27	□□□□□ -1.73
PLS3-208	ENST00000497870	C11orf65	Q8NCR3	313 aa		4.27	□□□□□ -1.73
PLS3-208	ENST00000497870	RAB40A	Q8WXH6	277 aa		4.27	□□□□□ -1.73
PLS3-208	ENST00000497870	ATP2A3	Q93084	1043 aa		4.27	□□□□□ -1.73
PLS3-208	ENST00000497870	ELP4	Q96EB1	424 aa		4.27	□□□□□ -1.73
PLS3-208	ENST00000497870	KAZALD1	Q96I82	304 aa		4.27	□□□□□ -1.73
PLS3-208	ENST00000497870	RSRC1	Q96IZ7	334 aa	Known RBP	4.27	□□□□□ -1.73
PLS3-208	ENST00000497870	CADM1	Q9BY67	442 aa	Known RBP	4.27	□□□□□ -1.73
PLS3-208	ENST00000497870	CTDSP1	Q9GZU7	261 aa		4.27	□□□□□ -1.73
PLS3-208	ENST00000497870	RANBP17	Q9H2T7	1088 aa	Known RBP	4.27	□□□□□ -1.73
PLS3-208	ENST00000497870	MUC13	Q9H3R2	512 aa		4.27	□□□□□ -1.73
PLS3-208	ENST00000497870	IL21R	Q9HBE5	538 aa		4.27	□□□□□ -1.73
PLS3-208	ENST00000497870	SEMA4B	Q9NPR2	832 aa	Predicted RBP	4.27	□□□□□ -1.73
PLS3-208	ENST00000497870	ARL8B	Q9NVJ2	186 aa		4.27	□□□□□ -1.73
PLS3-208	ENST00000497870	ZNF70	Q9UC06	446 aa	Predicted RBP	4.27	□□□□□ -1.73
PLS3-208	ENST00000497870	FBXO40	Q9UH90	709 aa		4.27	□□□□□ -1.73
PLS3-208	ENST00000497870	NRBP1	Q9UHY1	535 aa		4.27	□□□□□ -1.73
PLS3-208	ENST00000497870	SARDH	Q9UL12	918 aa		4.27	□□□□□ -1.73
PLS3-208	ENST00000497870	DHDH	Q9UQ10	334 aa		4.27	□□□□□ -1.73
PLS3-208	ENST00000497870	CAMK2A	Q9UQM7	478 aa		4.27	□□□□□ -1.73
PLS3-208	ENST00000497870	PKP3	Q9Y446	797 aa		4.27	□□□□□ -1.73
PLS3-208	ENST00000497870	HEMK1	Q9Y5R4	338 aa	Predicted RBP	4.27	□□□□□ -1.73
PLS3-208	ENST00000497870	EMSY	Q7Z589	1322 aa		4.26	□□□□□ -1.73
PLS3-208	ENST00000497870	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	4.26	□□□□□ -1.73
PLS3-208	ENST00000497870	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	4.26	□□□□□ -1.73
PLS3-208	ENST00000497870		A6NCN8	305 aa		4.26	□□□□□ -1.73
PLS3-208	ENST00000497870	TNFSF14	O43557	240 aa		4.26	□□□□□ -1.73
PLS3-208	ENST00000497870	TMCC2	O75069	709 aa		4.26	□□□□□ -1.73
PLS3-208	ENST00000497870	PDE8B	O95263	885 aa		4.26	□□□□□ -1.73
PLS3-208	ENST00000497870	AKR1A1	P14550	325 aa		4.26	□□□□□ -1.73
PLS3-208	ENST00000497870	CDH2	P19022	906 aa	Predicted RBP	4.26	□□□□□ -1.73
PLS3-208	ENST00000497870	LMO1	P25800	156 aa		4.26	□□□□□ -1.73
PLS3-208	ENST00000497870	SKIV2L2	P42285	1042 aa	Known RBP	4.26	□□□□□ -1.73
PLS3-208	ENST00000497870	BLK	P51451	505 aa		4.26	□□□□□ -1.73
PLS3-208	ENST00000497870	ZNF84	P51523	738 aa		4.26	□□□□□ -1.73
PLS3-208	ENST00000497870	GOLGA8DP	Q0D2H9	430 aa		4.26	□□□□□ -1.73
PLS3-208	ENST00000497870	TOMM20	Q15388	145 aa		4.26	□□□□□ -1.73
PLS3-208	ENST00000497870	ANXA2R	Q3ZCQ2	193 aa		4.26	□□□□□ -1.73
PLS3-208	ENST00000497870	CERKL	Q49MI3	558 aa	Predicted RBP	4.26	□□□□□ -1.73
PLS3-208	ENST00000497870	VWA5B1	Q5TIE3	1220 aa		4.26	□□□□□ -1.73
PLS3-208	ENST00000497870	FAM205BP	Q63HN1	556 aa		4.26	□□□□□ -1.73
PLS3-208	ENST00000497870	KLB	Q86Z14	1044 aa		4.26	□□□□□ -1.73
PLS3-208	ENST00000497870	NEK9	Q8TD19	979 aa		4.26	□□□□□ -1.73
PLS3-208	ENST00000497870	RUFY2	Q8WXA3	655 aa		4.26	□□□□□ -1.73
PLS3-208	ENST00000497870	KAT2B	Q92831	832 aa		4.26	□□□□□ -1.73
PLS3-208	ENST00000497870	ERP27	Q96DN0	273 aa		4.26	□□□□□ -1.73
PLS3-208	ENST00000497870	ZNF778	Q96MU6	729 aa		4.26	□□□□□ -1.73
PLS3-208	ENST00000497870	GPR78	Q96P69	363 aa		4.26	□□□□□ -1.73
PLS3-208	ENST00000497870	NR1H4	Q96RI1	486 aa	Predicted RBP	4.26	□□□□□ -1.73
PLS3-208	ENST00000497870	SEMA4C	Q9C0C4	833 aa		4.26	□□□□□ -1.73
PLS3-208	ENST00000497870	NUAK2	Q9H093	628 aa		4.26	□□□□□ -1.73
PLS3-208	ENST00000497870	SLC25A18	Q9H1K4	315 aa		4.26	□□□□□ -1.73
PLS3-208	ENST00000497870	IL1RAPL1	Q9NZN1	696 aa		4.26	□□□□□ -1.73
PLS3-208	ENST00000497870	SH3BP4	Q9P0V3	963 aa		4.26	□□□□□ -1.73
PLS3-208	ENST00000497870	VPS28	Q9UK41	221 aa		4.26	□□□□□ -1.73
PLS3-208	ENST00000497870	NAALADL1	Q9UQQ1	740 aa		4.26	□□□□□ -1.73
PLS3-208	ENST00000497870	DTX4	Q9Y2E6	619 aa		4.26	□□□□□ -1.73
PLS3-208	ENST00000497870	C17orf113	A0A1B0GUU1	675 aa		4.25	□□□□□ -1.73
PLS3-208	ENST00000497870	POC1B-GALNT4	F8VUJ3	575 aa		4.25	□□□□□ -1.73
PLS3-208	ENST00000497870	AP3D1	O14617	1153 aa		4.25	□□□□□ -1.73
PLS3-208	ENST00000497870	PER2	O15055	1255 aa		4.25	□□□□□ -1.73
PLS3-208	ENST00000497870	RNF8	O76064	485 aa		4.25	□□□□□ -1.73
PLS3-208	ENST00000497870	KAT7	O95251	611 aa		4.25	□□□□□ -1.73
PLS3-208	ENST00000497870	MLH1	P40692	756 aa		4.25	□□□□□ -1.73
PLS3-208	ENST00000497870	ABCG1	P45844	678 aa		4.25	□□□□□ -1.73
PLS3-208	ENST00000497870	MTNR1A	P48039	350 aa		4.25	□□□□□ -1.73
PLS3-208	ENST00000497870	HARS2	P49590	506 aa	Known RBP	4.25	□□□□□ -1.73
PLS3-208	ENST00000497870	CTCF	P49711	727 aa	Predicted RBP	4.25	□□□□□ -1.73
PLS3-208	ENST00000497870	RPS3A	P61247	264 aa	Known RBP	4.25	□□□□□ -1.73
PLS3-208	ENST00000497870	UFM1	P61960	85 aa		4.25	□□□□□ -1.73
PLS3-208	ENST00000497870	TUBA4A	P68366	448 aa		4.25	□□□□□ -1.73
PLS3-208	ENST00000497870	NEXN	Q0ZGT2	675 aa		4.25	□□□□□ -1.73
PLS3-208	ENST00000497870	CUL4A	Q13619	759 aa		4.25	□□□□□ -1.73
PLS3-208	ENST00000497870	TBCE	Q15813	527 aa	Predicted RBP	4.25	□□□□□ -1.73
PLS3-208	ENST00000497870	TMEM119	Q4V9L6	283 aa		4.25	□□□□□ -1.73
PLS3-208	ENST00000497870	C10orf76	Q5T2E6	689 aa		4.25	□□□□□ -1.73
PLS3-208	ENST00000497870	PRAMEF17	Q5VTA0	474 aa		4.25	□□□□□ -1.73
PLS3-208	ENST00000497870	SNX30	Q5VWJ9	437 aa		4.25	□□□□□ -1.73
PLS3-208	ENST00000497870	MTFR2	Q6P444	385 aa		4.25	□□□□□ -1.73
PLS3-208	ENST00000497870	TMEM154	Q6P9G4	183 aa		4.25	□□□□□ -1.73
PLS3-208	ENST00000497870	NAPRT	Q6XQN6	538 aa		4.25	□□□□□ -1.73
PLS3-208	ENST00000497870	PXK	Q7Z7A4	578 aa		4.25	□□□□□ -1.73
PLS3-208	ENST00000497870	MON1A	Q86VX9	555 aa		4.25	□□□□□ -1.73
PLS3-208	ENST00000497870	VPS52	Q8N1B4	723 aa		4.25	□□□□□ -1.73
PLS3-208	ENST00000497870	POMGNT1	Q8WZA1	660 aa		4.25	□□□□□ -1.73
PLS3-208	ENST00000497870	HSPH1	Q92598	858 aa		4.25	□□□□□ -1.73
PLS3-208	ENST00000497870	CELF1	Q92879	486 aa	Known RBP	4.25	□□□□□ -1.73
PLS3-208	ENST00000497870	FAM149B1	Q96BN6	582 aa		4.25	□□□□□ -1.73
PLS3-208	ENST00000497870	NSUN4	Q96CB9	384 aa	Known RBP	4.25	□□□□□ -1.73
PLS3-208	ENST00000497870	KLHL29	Q96CT2	875 aa		4.25	□□□□□ -1.73
PLS3-208	ENST00000497870	CCDC34	Q96HJ3	373 aa		4.25	□□□□□ -1.73
PLS3-208	ENST00000497870	RITA1	Q96K30	269 aa		4.25	□□□□□ -1.73
PLS3-208	ENST00000497870	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	4.25	□□□□□ -1.73
PLS3-208	ENST00000497870	IFT27	Q9BW83	186 aa		4.25	□□□□□ -1.73
PLS3-208	ENST00000497870	PRKRIP1	Q9H875	184 aa	Predicted RBP	4.25	□□□□□ -1.73
PLS3-208	ENST00000497870	ENTPD7	Q9NQZ7	604 aa		4.25	□□□□□ -1.73
PLS3-208	ENST00000497870	HAUS2	Q9NVX0	235 aa		4.25	□□□□□ -1.73
PLS3-208	ENST00000497870	HCFC1R1	Q9NWW0	138 aa		4.25	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms