RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 K7ENM7 598 aa8.01□□□□□ -1.13
VPS45-210ENST00000497638 GABRDO14764 452 aa8.01□□□□□ -1.13
VPS45-210ENST00000497638 PAPSS1O43252 624 aaPredicted RBP8.01□□□□□ -1.13
VPS45-210ENST00000497638 IGLV3-19P01714 112 aa8.01□□□□□ -1.13
VPS45-210ENST00000497638 C1SP09871 688 aa8.01□□□□□ -1.13
VPS45-210ENST00000497638 C6P13671 934 aa8.01□□□□□ -1.13
VPS45-210ENST00000497638 ACTN2P35609 894 aa8.01□□□□□ -1.13
VPS45-210ENST00000497638 ACOT2P49753 483 aa8.01□□□□□ -1.13
VPS45-210ENST00000497638 ZNF132P52740 706 aa8.01□□□□□ -1.13
VPS45-210ENST00000497638 UCNP55089 124 aa8.01□□□□□ -1.13
VPS45-210ENST00000497638 CXADRP78310 365 aa8.01□□□□□ -1.13
VPS45-210ENST00000497638 PRR5P85299 388 aa8.01□□□□□ -1.13
VPS45-210ENST00000497638 SRSF1Q07955 248 aaKnown RBP eCLIP8.01□□□□□ -1.13
VPS45-210ENST00000497638 MYO1EQ12965 1108 aa8.01□□□□□ -1.13
VPS45-210ENST00000497638 ANKRD1Q15327 319 aa8.01□□□□□ -1.13
VPS45-210ENST00000497638 SF3A1Q15459 793 aaKnown RBP8.01□□□□□ -1.13
VPS45-210ENST00000497638 CCDC142Q17RM4 750 aa8.01□□□□□ -1.13
VPS45-210ENST00000497638 ANO4Q32M45 955 aa8.01□□□□□ -1.13
VPS45-210ENST00000497638 ADALQ6DHV7 355 aa8.01□□□□□ -1.13
VPS45-210ENST00000497638 SLFN12LQ6IEE8 588 aa8.01□□□□□ -1.13
VPS45-210ENST00000497638 SLC39A4Q6P5W5 647 aa8.01□□□□□ -1.13
VPS45-210ENST00000497638 FAM171BQ6P995 826 aa8.01□□□□□ -1.13
VPS45-210ENST00000497638 OSTM1Q86WC4 334 aa8.01□□□□□ -1.13
VPS45-210ENST00000497638 ADGRF2Q8IZF7 708 aa8.01□□□□□ -1.13
VPS45-210ENST00000497638 C4orf32Q8N8J7 132 aa8.01□□□□□ -1.13
VPS45-210ENST00000497638 SYT2Q8N9I0 419 aaPredicted RBP8.01□□□□□ -1.13
VPS45-210ENST00000497638 NSUN7Q8NE18 718 aaKnown RBP8.01□□□□□ -1.13
VPS45-210ENST00000497638 GTF3C6Q969F1 213 aa8.01□□□□□ -1.13
VPS45-210ENST00000497638 IGSF8Q969P0 613 aa8.01□□□□□ -1.13
VPS45-210ENST00000497638 MYLPFQ96A32 169 aa8.01□□□□□ -1.13
VPS45-210ENST00000497638 TMEM176AQ96HP8 235 aa8.01□□□□□ -1.13
VPS45-210ENST00000497638 SYT15Q9BQS2 421 aa8.01□□□□□ -1.13
VPS45-210ENST00000497638 BACH2Q9BYV9 841 aa8.01□□□□□ -1.13
VPS45-210ENST00000497638 FOXP1Q9H334 677 aaPredicted RBP8.01□□□□□ -1.13
VPS45-210ENST00000497638 ITM2CQ9NQX7 267 aa8.01□□□□□ -1.13
VPS45-210ENST00000497638 DNAJC17Q9NVM6 304 aaKnown RBP8.01□□□□□ -1.13
VPS45-210ENST00000497638 GDAP2Q9NXN4 497 aa8.01□□□□□ -1.13
VPS45-210ENST00000497638 EIF2B4Q9UI10 523 aaKnown RBP8.01□□□□□ -1.13
VPS45-210ENST00000497638 ODF2LQ9ULJ1 636 aa8.01□□□□□ -1.13
VPS45-210ENST00000497638 SH3BP1Q9Y3L3 701 aa8.01□□□□□ -1.13
VPS45-210ENST00000497638 RAD54BQ9Y620 910 aa8.01□□□□□ -1.13
VPS45-210ENST00000497638 MYO9AB2RTY4 2548 aa8□□□□□ -1.13
VPS45-210ENST00000497638 NOTCH2Q04721 2471 aa8□□□□□ -1.13
VPS45-210ENST00000497638 PP2D1A8MPX8 630 aa8□□□□□ -1.13
VPS45-210ENST00000497638 LAD1O00515 517 aa8□□□□□ -1.13
VPS45-210ENST00000497638 NPC1O15118 1278 aa8□□□□□ -1.13
VPS45-210ENST00000497638 SLC28A2O43868 658 aa8□□□□□ -1.13
VPS45-210ENST00000497638 CACNG3O60359 315 aa8□□□□□ -1.13
VPS45-210ENST00000497638 DFNA5O60443 496 aa8□□□□□ -1.13
VPS45-210ENST00000497638 RFPL3O75679 317 aa8□□□□□ -1.13
VPS45-210ENST00000497638 ZNF16P17020 682 aaPredicted RBP8□□□□□ -1.13
VPS45-210ENST00000497638 BDNFP23560 247 aa8□□□□□ -1.13
VPS45-210ENST00000497638 CSNK1EP49674 416 aaKnown RBP8□□□□□ -1.13
VPS45-210ENST00000497638 CSRP3P50461 194 aa8□□□□□ -1.13
VPS45-210ENST00000497638 TPMTP51580 245 aa8□□□□□ -1.13
VPS45-210ENST00000497638 SLURP1P55000 103 aa8□□□□□ -1.13
VPS45-210ENST00000497638 SLC12A3P55017 1021 aa8□□□□□ -1.13
VPS45-210ENST00000497638 CORO7P57737 925 aa8□□□□□ -1.13
VPS45-210ENST00000497638 PLP2Q04941 152 aa8□□□□□ -1.13
VPS45-210ENST00000497638 TAF10Q12962 218 aa8□□□□□ -1.13
VPS45-210ENST00000497638 KIF19Q2TAC6 998 aa8□□□□□ -1.13
VPS45-210ENST00000497638 FUT11Q495W5 492 aa8□□□□□ -1.13
VPS45-210ENST00000497638 HYIQ5T013 277 aa8□□□□□ -1.13
VPS45-210ENST00000497638 TMEM25Q86YD3 366 aa8□□□□□ -1.13
VPS45-210ENST00000497638 FMNL3Q8IVF7 1028 aa8□□□□□ -1.13
VPS45-210ENST00000497638 BBS7Q8IWZ6 715 aa8□□□□□ -1.13
VPS45-210ENST00000497638 RBBP8NLQ8NC74 664 aaPredicted RBP8□□□□□ -1.13
VPS45-210ENST00000497638 OVCA2Q8WZ82 227 aa8□□□□□ -1.13
VPS45-210ENST00000497638 C8orf48Q96LL4 319 aa8□□□□□ -1.13
VPS45-210ENST00000497638 XPO6Q96QU8 1125 aaKnown RBP8□□□□□ -1.13
VPS45-210ENST00000497638 NUP58Q9BVL2 599 aa8□□□□□ -1.13
VPS45-210ENST00000497638 WDR35Q9P2L0 1181 aa8□□□□□ -1.13
VPS45-210ENST00000497638 AGO2Q9UKV8 859 aaKnown RBP8□□□□□ -1.13
VPS45-210ENST00000497638 CDH9Q9ULB4 789 aa8□□□□□ -1.13
VPS45-210ENST00000497638 NOL7Q9UMY1 257 aaKnown RBP8□□□□□ -1.13
VPS45-210ENST00000497638 AGAP1Q9UPQ3 857 aa8□□□□□ -1.13
VPS45-210ENST00000497638 STYXL1Q9Y6J8 313 aa8□□□□□ -1.13
VPS45-210ENST00000497638 PMF1-BGLAPU3KQ54 211 aa8□□□□□ -1.13
VPS45-210ENST00000497638 NUMA1Q14980 2115 aa8□□□□□ -1.13
VPS45-210ENST00000497638 TMEM131Q92545 1883 aa8□□□□□ -1.13
VPS45-210ENST00000497638 TEX15Q9BXT5 2789 aa7.99□□□□□ -1.13
VPS45-210ENST00000497638 LRRK2Q5S007 2527 aa7.99□□□□□ -1.13
VPS45-210ENST00000497638 KCNJ18B7U540 433 aa7.99□□□□□ -1.13
VPS45-210ENST00000497638 PRRT4C9JH25 899 aa7.99□□□□□ -1.13
VPS45-210ENST00000497638 F8VP50 259 aa7.99□□□□□ -1.13
VPS45-210ENST00000497638 TRIM24O15164 1050 aa7.99□□□□□ -1.13
VPS45-210ENST00000497638 BRINP1O60477 761 aa7.99□□□□□ -1.13
VPS45-210ENST00000497638 ITGB3P05106 788 aa7.99□□□□□ -1.13
VPS45-210ENST00000497638 PLA2G4BP0C869 781 aa7.99□□□□□ -1.13
VPS45-210ENST00000497638 PRPHP41219 470 aa7.99□□□□□ -1.13
VPS45-210ENST00000497638 TUBP50607 506 aa7.99□□□□□ -1.13
VPS45-210ENST00000497638 ZNF131P52739 623 aa7.99□□□□□ -1.13
VPS45-210ENST00000497638 TMPRSS3P57727 454 aa7.99□□□□□ -1.13
VPS45-210ENST00000497638 PSMC1P62191 440 aaKnown RBP7.99□□□□□ -1.13
VPS45-210ENST00000497638 TFAMQ00059 246 aaKnown RBP7.99□□□□□ -1.13
VPS45-210ENST00000497638 CCDC173Q0VFZ6 552 aa7.99□□□□□ -1.13
VPS45-210ENST00000497638 TARDBPQ13148 414 aaKnown RBP eCLIP7.99□□□□□ -1.13
VPS45-210ENST00000497638 E2F5Q15329 346 aa7.99□□□□□ -1.13
VPS45-210ENST00000497638 TBC1D25Q3MII6 688 aa7.99□□□□□ -1.13
VPS45-210ENST00000497638 HES3Q5TGS1 186 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms