RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 SIT1Q9Y3P8 196 aa20.49■□□□□ 0.87
CTSD-206ENST00000497544 SPEGQ15772 3267 aa20.49■□□□□ 0.87
CTSD-206ENST00000497544 CHD5Q8TDI0 1954 aa20.48■□□□□ 0.87
CTSD-206ENST00000497544 CBX4O00257 560 aa20.48■□□□□ 0.87
CTSD-206ENST00000497544 DFFAO00273 331 aa20.48■□□□□ 0.87
CTSD-206ENST00000497544 DCNP07585 359 aaKnown RBP20.48■□□□□ 0.87
CTSD-206ENST00000497544 CHRNB1P11230 501 aa20.48■□□□□ 0.87
CTSD-206ENST00000497544 DYNLT1P63172 113 aa20.48■□□□□ 0.87
CTSD-206ENST00000497544 MRPS21P82921 87 aaKnown RBP20.48■□□□□ 0.87
CTSD-206ENST00000497544 DMWDQ09019 674 aa20.48■□□□□ 0.87
CTSD-206ENST00000497544 CCINQ13939 588 aa20.48■□□□□ 0.87
CTSD-206ENST00000497544 CCDC181Q5TID7 509 aa20.48■□□□□ 0.87
CTSD-206ENST00000497544 EMC10Q5UCC4 262 aa20.48■□□□□ 0.87
CTSD-206ENST00000497544 SLC9A4Q6AI14 798 aa20.48■□□□□ 0.87
CTSD-206ENST00000497544 C1orf210Q8IVY1 113 aa20.48■□□□□ 0.87
CTSD-206ENST00000497544 SYNPOQ8N3V7 929 aa20.48■□□□□ 0.87
CTSD-206ENST00000497544 NPWQ8N729 165 aa20.48■□□□□ 0.87
CTSD-206ENST00000497544 DCAF4L2Q8NA75 395 aa20.48■□□□□ 0.87
CTSD-206ENST00000497544 EZH1Q92800 747 aaPredicted RBP20.48■□□□□ 0.87
CTSD-206ENST00000497544 ACDQ96AP0 544 aa20.48■□□□□ 0.87
CTSD-206ENST00000497544 HMCESQ96FZ2 354 aa20.48■□□□□ 0.87
CTSD-206ENST00000497544 PSMB7Q99436 277 aa20.48■□□□□ 0.87
CTSD-206ENST00000497544 ACE2Q9BYF1 805 aaPredicted RBP20.48■□□□□ 0.87
CTSD-206ENST00000497544 CARD9Q9H257 536 aa20.48■□□□□ 0.87
CTSD-206ENST00000497544 LRRC19Q9H756 370 aa20.48■□□□□ 0.87
CTSD-206ENST00000497544 RBM12Q9NTZ6 932 aaKnown RBP20.48■□□□□ 0.87
CTSD-206ENST00000497544 KDELR3O43731 214 aa20.47■□□□□ 0.87
CTSD-206ENST00000497544 TJP3O95049 919 aa20.47■□□□□ 0.87
CTSD-206ENST00000497544 DLDP09622 509 aaKnown RBP20.47■□□□□ 0.87
CTSD-206ENST00000497544 PTPN7P35236 360 aa20.47■□□□□ 0.87
CTSD-206ENST00000497544 TIE1P35590 1138 aa20.47■□□□□ 0.87
CTSD-206ENST00000497544 NNMTP40261 264 aa20.47■□□□□ 0.87
CTSD-206ENST00000497544 PAPOLAP51003 745 aaKnown RBP20.47■□□□□ 0.87
CTSD-206ENST00000497544 ST8SIA6P61647 398 aa20.47■□□□□ 0.87
CTSD-206ENST00000497544 ECT2LQ008S8 904 aa20.47■□□□□ 0.87
CTSD-206ENST00000497544 DCAF12L1Q5VU92 463 aa20.47■□□□□ 0.87
CTSD-206ENST00000497544 AFMIDQ63HM1 303 aa20.47■□□□□ 0.87
CTSD-206ENST00000497544 ARHGAP12Q8IWW6 846 aa20.47■□□□□ 0.87
CTSD-206ENST00000497544 PLD5Q8N7P1 536 aa20.47■□□□□ 0.87
CTSD-206ENST00000497544 ZNF513Q8N8E2 541 aaPredicted RBP20.47■□□□□ 0.87
CTSD-206ENST00000497544 NETO2Q8NC67 525 aa20.47■□□□□ 0.87
CTSD-206ENST00000497544 PJA1Q8NG27 643 aa20.47■□□□□ 0.87
CTSD-206ENST00000497544 KCNV2Q8TDN2 545 aa20.47■□□□□ 0.87
CTSD-206ENST00000497544 CYB5D2Q8WUJ1 264 aa20.47■□□□□ 0.87
CTSD-206ENST00000497544 SORCS1Q8WY21 1168 aa20.47■□□□□ 0.87
CTSD-206ENST00000497544 SLC25A13Q9UJS0 675 aa20.47■□□□□ 0.87
CTSD-206ENST00000497544 HEY1Q9Y5J3 304 aa20.47■□□□□ 0.87
CTSD-206ENST00000497544 ZZEF1O43149 2961 aa20.46■□□□□ 0.87
CTSD-206ENST00000497544 MFSD11O43934 449 aa20.46■□□□□ 0.87
CTSD-206ENST00000497544 SNAP91O60641 907 aa20.46■□□□□ 0.87
CTSD-206ENST00000497544 ATP1A1P05023 1023 aaKnown RBP20.46■□□□□ 0.87
CTSD-206ENST00000497544 TGM2P21980 687 aa20.46■□□□□ 0.87
CTSD-206ENST00000497544 KIR2DL1P43626 348 aaPredicted RBP20.46■□□□□ 0.87
CTSD-206ENST00000497544 SERINC3Q13530 473 aa20.46■□□□□ 0.87
CTSD-206ENST00000497544 C2orf27AQ580R0 203 aa20.46■□□□□ 0.87
CTSD-206ENST00000497544 RETSATQ6NUM9 610 aa20.46■□□□□ 0.87
CTSD-206ENST00000497544 BBS12Q6ZW61 710 aa20.46■□□□□ 0.87
CTSD-206ENST00000497544 BZW1Q7L1Q6 419 aaKnown RBP20.46■□□□□ 0.87
CTSD-206ENST00000497544 ZNF687Q8N1G0 1237 aa20.46■□□□□ 0.87
CTSD-206ENST00000497544 P3H4Q92791 437 aa20.46■□□□□ 0.87
CTSD-206ENST00000497544 PBKQ96KB5 322 aa20.46■□□□□ 0.87
CTSD-206ENST00000497544 WDR24Q96S15 920 aa20.46■□□□□ 0.87
CTSD-206ENST00000497544 NAPGQ99747 312 aaPredicted RBP20.46■□□□□ 0.87
CTSD-206ENST00000497544 VPS51Q9UID3 782 aa20.46■□□□□ 0.87
CTSD-206ENST00000497544 ERVW-1Q9UQF0 538 aa20.46■□□□□ 0.87
CTSD-206ENST00000497544 CTAGE9A4FU28 777 aa20.45■□□□□ 0.86
CTSD-206ENST00000497544 NPC1O15118 1278 aa20.45■□□□□ 0.86
CTSD-206ENST00000497544 CEP104O60308 925 aa20.45■□□□□ 0.86
CTSD-206ENST00000497544 RNF40O75150 1001 aa20.45■□□□□ 0.86
CTSD-206ENST00000497544 SRPRAP08240 638 aaKnown RBP20.45■□□□□ 0.86
CTSD-206ENST00000497544 HNRNPLP14866 589 aaKnown RBP eCLIP20.45■□□□□ 0.86
CTSD-206ENST00000497544 MX2P20592 715 aa20.45■□□□□ 0.86
CTSD-206ENST00000497544 TGM1P22735 817 aa20.45■□□□□ 0.86
CTSD-206ENST00000497544 CXCR5P32302 372 aa20.45■□□□□ 0.86
CTSD-206ENST00000497544 DEKP35659 375 aaKnown RBP20.45■□□□□ 0.86
CTSD-206ENST00000497544 CTSOP43234 321 aaPredicted RBP20.45■□□□□ 0.86
CTSD-206ENST00000497544 ETF1P62495 437 aaKnown RBP20.45■□□□□ 0.86
CTSD-206ENST00000497544 GBE1Q04446 702 aa20.45■□□□□ 0.86
CTSD-206ENST00000497544 SLC20A2Q08357 652 aa20.45■□□□□ 0.86
CTSD-206ENST00000497544 SLC10A2Q12908 348 aaPredicted RBP20.45■□□□□ 0.86
CTSD-206ENST00000497544 FZD5Q13467 585 aa20.45■□□□□ 0.86
CTSD-206ENST00000497544 FNDC3BQ53EP0 1204 aaKnown RBP20.45■□□□□ 0.86
CTSD-206ENST00000497544 EGFLAMQ63HQ2 1017 aa20.45■□□□□ 0.86
CTSD-206ENST00000497544 SDE2Q6IQ49 451 aa20.45■□□□□ 0.86
CTSD-206ENST00000497544 NPNTQ6UXI9 565 aa20.45■□□□□ 0.86
CTSD-206ENST00000497544 TRMT11Q7Z4G4 463 aaKnown RBP20.45■□□□□ 0.86
CTSD-206ENST00000497544 LRRC49Q8IUZ0 686 aa20.45■□□□□ 0.86
CTSD-206ENST00000497544 TP53INP2Q8IXH6 220 aa20.45■□□□□ 0.86
CTSD-206ENST00000497544 MAML2Q8IZL2 1156 aaPredicted RBP20.45■□□□□ 0.86
CTSD-206ENST00000497544 USP33Q8TEY7 942 aa20.45■□□□□ 0.86
CTSD-206ENST00000497544 RPL10LQ96L21 214 aaKnown RBP20.45■□□□□ 0.86
CTSD-206ENST00000497544 SP110Q9HB58 689 aa20.45■□□□□ 0.86
CTSD-206ENST00000497544 THAP10Q9P2Z0 257 aaPredicted RBP20.45■□□□□ 0.86
CTSD-206ENST00000497544 RAD54BQ9Y620 910 aa20.45■□□□□ 0.86
CTSD-206ENST00000497544 ZSCAN5CA6NGD5 496 aaPredicted RBP20.44■□□□□ 0.86
CTSD-206ENST00000497544 ZMPSTE24O75844 475 aa20.44■□□□□ 0.86
CTSD-206ENST00000497544 MAP3K6O95382 1288 aa20.44■□□□□ 0.86
CTSD-206ENST00000497544 GLDCP23378 1020 aa20.44■□□□□ 0.86
CTSD-206ENST00000497544 CASQ1P31415 396 aa20.44■□□□□ 0.86
CTSD-206ENST00000497544 NR2C2P49116 596 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms