RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 ANKRD45Q5TZF3 282 aa4.1□□□□□ -1.75
CD46-218ENST00000496723 PARM1Q6UWI2 310 aa4.1□□□□□ -1.75
CD46-218ENST00000496723 BRSK2Q8IWQ3 736 aa4.1□□□□□ -1.75
CD46-218ENST00000496723 SUGP1Q8IWZ8 645 aaKnown RBP4.1□□□□□ -1.75
CD46-218ENST00000496723 FAM217AQ8IXS0 508 aa4.1□□□□□ -1.75
CD46-218ENST00000496723 FTSJ3Q8IY81 847 aaKnown RBP4.1□□□□□ -1.75
CD46-218ENST00000496723 LRRC57Q8N9N7 239 aa4.1□□□□□ -1.75
CD46-218ENST00000496723 SPATA5Q8NB90 893 aa4.1□□□□□ -1.75
CD46-218ENST00000496723 LINS1Q8NG48 757 aa4.1□□□□□ -1.75
CD46-218ENST00000496723 ASB5Q8WWX0 329 aa4.1□□□□□ -1.75
CD46-218ENST00000496723 TBC1D20Q96BZ9 403 aa4.1□□□□□ -1.75
CD46-218ENST00000496723 RBM17Q96I25 401 aaKnown RBP4.1□□□□□ -1.75
CD46-218ENST00000496723 IFT27Q9BW83 186 aa4.1□□□□□ -1.75
CD46-218ENST00000496723 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.1□□□□□ -1.75
CD46-218ENST00000496723 RBM38Q9H0Z9 239 aaKnown RBP4.1□□□□□ -1.75
CD46-218ENST00000496723 ISCUQ9H1K1 167 aa4.1□□□□□ -1.75
CD46-218ENST00000496723 PROCRQ9UNN8 238 aa4.1□□□□□ -1.75
CD46-218ENST00000496723 DERAQ9Y315 318 aa4.1□□□□□ -1.75
CD46-218ENST00000496723 RAP2CQ9Y3L5 183 aa4.1□□□□□ -1.75
CD46-218ENST00000496723 SLC4A4Q9Y6R1 1079 aa4.1□□□□□ -1.75
CD46-218ENST00000496723 MORC2Q9Y6X9 1032 aaPredicted RBP4.1□□□□□ -1.75
CD46-218ENST00000496723 NOTCH4Q99466 2003 aa4.09□□□□□ -1.75
CD46-218ENST00000496723 RPS10-NUDT3A0A1W2PQS6 291 aa4.09□□□□□ -1.75
CD46-218ENST00000496723 TMEM247A6NEH6 219 aa4.09□□□□□ -1.75
CD46-218ENST00000496723 GAGE12JA6NER3 117 aa4.09□□□□□ -1.75
CD46-218ENST00000496723 STX16-NPEPL1H3BU86 382 aa4.09□□□□□ -1.75
CD46-218ENST00000496723 STX16O14662 325 aa4.09□□□□□ -1.75
CD46-218ENST00000496723 TNFRSF13BO14836 293 aaPredicted RBP4.09□□□□□ -1.75
CD46-218ENST00000496723 IRAK2O43187 625 aa4.09□□□□□ -1.75
CD46-218ENST00000496723 TK1P04183 234 aa4.09□□□□□ -1.75
CD46-218ENST00000496723 DHRS4L1P0CG22 281 aa4.09□□□□□ -1.75
CD46-218ENST00000496723 TGFB3P10600 412 aa4.09□□□□□ -1.75
CD46-218ENST00000496723 CDC25AP30304 524 aa4.09□□□□□ -1.75
CD46-218ENST00000496723 TNFSF8P32971 234 aa4.09□□□□□ -1.75
CD46-218ENST00000496723 TMPRSS3P57727 454 aa4.09□□□□□ -1.75
CD46-218ENST00000496723 ADCK5Q3MIX3 580 aa4.09□□□□□ -1.75
CD46-218ENST00000496723 AADACL2Q6P093 401 aa4.09□□□□□ -1.75
CD46-218ENST00000496723 SLC16A12Q6ZSM3 486 aa4.09□□□□□ -1.75
CD46-218ENST00000496723 Q6ZTC4 211 aa4.09□□□□□ -1.75
CD46-218ENST00000496723 CTU1Q7Z7A3 348 aaKnown RBP4.09□□□□□ -1.75
CD46-218ENST00000496723 CAMK1DQ8IU85 385 aa4.09□□□□□ -1.75
CD46-218ENST00000496723 NKAPQ8N5F7 415 aaKnown RBP4.09□□□□□ -1.75
CD46-218ENST00000496723 TMEM57Q8N5G2 664 aa4.09□□□□□ -1.75
CD46-218ENST00000496723 SPPL3Q8TCT6 385 aa4.09□□□□□ -1.75
CD46-218ENST00000496723 B3GNT4Q9C0J1 378 aa4.09□□□□□ -1.75
CD46-218ENST00000496723 PPCSQ9HAB8 311 aa4.09□□□□□ -1.75
CD46-218ENST00000496723 ITM2CQ9NQX7 267 aa4.09□□□□□ -1.75
CD46-218ENST00000496723 ZDHHC7Q9NXF8 308 aa4.09□□□□□ -1.75
CD46-218ENST00000496723 UPB1Q9UBR1 384 aa4.09□□□□□ -1.75
CD46-218ENST00000496723 CDH22Q9UJ99 828 aa4.09□□□□□ -1.75
CD46-218ENST00000496723 FEM1BQ9UK73 627 aa4.09□□□□□ -1.75
CD46-218ENST00000496723 IFRD1O00458 451 aaPredicted RBP4.08□□□□□ -1.76
CD46-218ENST00000496723 TMCC1O94876 653 aa4.08□□□□□ -1.76
CD46-218ENST00000496723 METTL18O95568 372 aa4.08□□□□□ -1.76
CD46-218ENST00000496723 PRKCHP24723 683 aa4.08□□□□□ -1.76
CD46-218ENST00000496723 HALP42357 657 aa4.08□□□□□ -1.76
CD46-218ENST00000496723 MVDP53602 400 aa4.08□□□□□ -1.76
CD46-218ENST00000496723 ARHGAP8P85298 464 aa4.08□□□□□ -1.76
CD46-218ENST00000496723 BYSLQ13895 437 aaKnown RBP4.08□□□□□ -1.76
CD46-218ENST00000496723 AP5B1Q2VPB7 878 aa4.08□□□□□ -1.76
CD46-218ENST00000496723 TMEM268Q5VZI3 342 aa4.08□□□□□ -1.76
CD46-218ENST00000496723 SCAIQ8N9R8 606 aa4.08□□□□□ -1.76
CD46-218ENST00000496723 KDM1BQ8NB78 822 aa4.08□□□□□ -1.76
CD46-218ENST00000496723 C7orf57Q8NEG2 295 aa4.08□□□□□ -1.76
CD46-218ENST00000496723 CEP70Q8NHQ1 597 aa4.08□□□□□ -1.76
CD46-218ENST00000496723 FAR1Q8WVX9 515 aa4.08□□□□□ -1.76
CD46-218ENST00000496723 FRG2BQ96QU4 278 aa4.08□□□□□ -1.76
CD46-218ENST00000496723 WDR77Q9BQA1 342 aaPredicted RBP4.08□□□□□ -1.76
CD46-218ENST00000496723 POLDIP3Q9BY77 421 aaKnown RBP4.08□□□□□ -1.76
CD46-218ENST00000496723 MRPL44Q9H9J2 332 aaKnown RBP4.08□□□□□ -1.76
CD46-218ENST00000496723 TLR8Q9NR97 1041 aaKnown RBP4.08□□□□□ -1.76
CD46-218ENST00000496723 PLEKHB1Q9UF11 243 aaPredicted RBP4.08□□□□□ -1.76
CD46-218ENST00000496723 RRP7AQ9Y3A4 280 aaKnown RBP4.08□□□□□ -1.76
CD46-218ENST00000496723 INSL5Q9Y5Q6 135 aa4.08□□□□□ -1.76
CD46-218ENST00000496723 MST1RQ04912 1400 aa4.07□□□□□ -1.76
CD46-218ENST00000496723 A0A0A0MQY5 61 aa4.07□□□□□ -1.76
CD46-218ENST00000496723 STMND1H3BQB6 276 aa4.07□□□□□ -1.76
CD46-218ENST00000496723 STRNO43815 780 aa4.07□□□□□ -1.76
CD46-218ENST00000496723 PIP5K1CO60331 668 aa4.07□□□□□ -1.76
CD46-218ENST00000496723 CBX6O95503 412 aa4.07□□□□□ -1.76
CD46-218ENST00000496723 DDAH2O95865 285 aa4.07□□□□□ -1.76
CD46-218ENST00000496723 UNGP13051 313 aaPredicted RBP4.07□□□□□ -1.76
CD46-218ENST00000496723 TNNT1P13805 278 aa4.07□□□□□ -1.76
CD46-218ENST00000496723 SKIV2L2P42285 1042 aaKnown RBP4.07□□□□□ -1.76
CD46-218ENST00000496723 RASSF2P50749 326 aa4.07□□□□□ -1.76
CD46-218ENST00000496723 PGGT1BP53609 377 aa4.07□□□□□ -1.76
CD46-218ENST00000496723 ARL4CP56559 192 aa4.07□□□□□ -1.76
CD46-218ENST00000496723 PKP1Q13835 747 aa4.07□□□□□ -1.76
CD46-218ENST00000496723 GPR18Q14330 331 aa4.07□□□□□ -1.76
CD46-218ENST00000496723 CTXN3Q4LDR2 81 aa4.07□□□□□ -1.76
CD46-218ENST00000496723 SYTL3Q4VX76 610 aa4.07□□□□□ -1.76
CD46-218ENST00000496723 Q6ZTK2 550 aa4.07□□□□□ -1.76
CD46-218ENST00000496723 WDR5BQ86VZ2 330 aa4.07□□□□□ -1.76
CD46-218ENST00000496723 C2CD5Q86YS7 1000 aa4.07□□□□□ -1.76
CD46-218ENST00000496723 HORMAD2Q8N7B1 307 aa4.07□□□□□ -1.76
CD46-218ENST00000496723 ANKRD44Q8N8A2 993 aa4.07□□□□□ -1.76
CD46-218ENST00000496723 ENGASEQ8NFI3 743 aa4.07□□□□□ -1.76
CD46-218ENST00000496723 GABPB2Q8TAK5 448 aaPredicted RBP4.07□□□□□ -1.76
CD46-218ENST00000496723 HDAC7Q8WUI4 952 aa4.07□□□□□ -1.76
CD46-218ENST00000496723 TRIM63Q969Q1 353 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms