RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 SCAIQ8N9R8 606 aa6.13□□□□□ -1.43
SF3B1-212ENST00000496458 FAR1Q8WVX9 515 aa6.13□□□□□ -1.43
SF3B1-212ENST00000496458 MIB2Q96AX9 1013 aa6.13□□□□□ -1.43
SF3B1-212ENST00000496458 ZNF479Q96JC4 524 aa6.13□□□□□ -1.43
SF3B1-212ENST00000496458 ZPBPQ9BS86 351 aa6.13□□□□□ -1.43
SF3B1-212ENST00000496458 CHODLQ9H9P2 273 aa6.13□□□□□ -1.43
SF3B1-212ENST00000496458 KIF17Q9P2E2 1029 aa6.13□□□□□ -1.43
SF3B1-212ENST00000496458 CDH22Q9UJ99 828 aa6.13□□□□□ -1.43
SF3B1-212ENST00000496458 ZNF580Q9UK33 172 aa6.13□□□□□ -1.43
SF3B1-212ENST00000496458 BECN2A8MW95 431 aa6.12□□□□□ -1.43
SF3B1-212ENST00000496458 STMND1H3BQB6 276 aa6.12□□□□□ -1.43
SF3B1-212ENST00000496458 FAM155BO75949 473 aa6.12□□□□□ -1.43
SF3B1-212ENST00000496458 DDAH2O95865 285 aa6.12□□□□□ -1.43
SF3B1-212ENST00000496458 T-ENOLP0DO92 83 aa6.12□□□□□ -1.43
SF3B1-212ENST00000496458 ARSBP15848 533 aa6.12□□□□□ -1.43
SF3B1-212ENST00000496458 HOXB6P17509 224 aaKnown RBP6.12□□□□□ -1.43
SF3B1-212ENST00000496458 TRAF1Q13077 416 aa6.12□□□□□ -1.43
SF3B1-212ENST00000496458 THOC5Q13769 683 aaKnown RBP6.12□□□□□ -1.43
SF3B1-212ENST00000496458 DCAF12L2Q5VW00 463 aa6.12□□□□□ -1.43
SF3B1-212ENST00000496458 KIAA1161Q6NSJ0 714 aa6.12□□□□□ -1.43
SF3B1-212ENST00000496458 TMEM71Q6P5X7 295 aa6.12□□□□□ -1.43
SF3B1-212ENST00000496458 CADM3Q8N126 398 aa6.12□□□□□ -1.43
SF3B1-212ENST00000496458 LINS1Q8NG48 757 aa6.12□□□□□ -1.43
SF3B1-212ENST00000496458 AFG1LQ8WV93 481 aa6.12□□□□□ -1.43
SF3B1-212ENST00000496458 RILPL2Q969X0 211 aa6.12□□□□□ -1.43
SF3B1-212ENST00000496458 TMEM204Q9BSN7 226 aa6.12□□□□□ -1.43
SF3B1-212ENST00000496458 FAM167BQ9BTA0 163 aa6.12□□□□□ -1.43
SF3B1-212ENST00000496458 PTPRHQ9HD43 1115 aa6.12□□□□□ -1.43
SF3B1-212ENST00000496458 MYO6Q9UM54 1294 aa6.12□□□□□ -1.43
SF3B1-212ENST00000496458 PCDHA7Q9UN72 937 aa6.12□□□□□ -1.43
SF3B1-212ENST00000496458 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.11□□□□□ -1.43
SF3B1-212ENST00000496458 SAC3D1A6NKF1 404 aa6.11□□□□□ -1.43
SF3B1-212ENST00000496458 NGFRP08138 427 aa6.11□□□□□ -1.43
SF3B1-212ENST00000496458 CCKBRP32239 447 aa6.11□□□□□ -1.43
SF3B1-212ENST00000496458 KCNJ4P48050 445 aa6.11□□□□□ -1.43
SF3B1-212ENST00000496458 CLCNKBP51801 687 aa6.11□□□□□ -1.43
SF3B1-212ENST00000496458 ROR2Q01974 943 aaKnown RBP6.11□□□□□ -1.43
SF3B1-212ENST00000496458 PKP1Q13835 747 aa6.11□□□□□ -1.43
SF3B1-212ENST00000496458 SYTL3Q4VX76 610 aa6.11□□□□□ -1.43
SF3B1-212ENST00000496458 AADACL2Q6P093 401 aa6.11□□□□□ -1.43
SF3B1-212ENST00000496458 WDR5BQ86VZ2 330 aa6.11□□□□□ -1.43
SF3B1-212ENST00000496458 CCT6BQ92526 530 aa6.11□□□□□ -1.43
SF3B1-212ENST00000496458 RBM17Q96I25 401 aaKnown RBP6.11□□□□□ -1.43
SF3B1-212ENST00000496458 ARPC5LQ9BPX5 153 aa6.11□□□□□ -1.43
SF3B1-212ENST00000496458 TWSG1Q9GZX9 223 aa6.11□□□□□ -1.43
SF3B1-212ENST00000496458 CATSPERBQ9H7T0 1116 aa6.11□□□□□ -1.43
SF3B1-212ENST00000496458 HIF1ANQ9NWT6 349 aa6.11□□□□□ -1.43
SF3B1-212ENST00000496458 PLK2Q9NYY3 685 aa6.11□□□□□ -1.43
SF3B1-212ENST00000496458 ICKQ9UPZ9 632 aa6.11□□□□□ -1.43
SF3B1-212ENST00000496458 OSGIN2Q9Y236 505 aa6.11□□□□□ -1.43
SF3B1-212ENST00000496458 PTGDR2Q9Y5Y4 395 aa6.11□□□□□ -1.43
SF3B1-212ENST00000496458 A0A1B0GVT2 93 aa6.1□□□□□ -1.43
SF3B1-212ENST00000496458 C17orf100A8MU93 164 aa6.1□□□□□ -1.43
SF3B1-212ENST00000496458 INAFM1C9JVW0 142 aa6.1□□□□□ -1.43
SF3B1-212ENST00000496458 I6L893 689 aaPredicted RBP6.1□□□□□ -1.43
SF3B1-212ENST00000496458 RGS14O43566 566 aa6.1□□□□□ -1.43
SF3B1-212ENST00000496458 STRNO43815 780 aa6.1□□□□□ -1.43
SF3B1-212ENST00000496458 NBNO60934 754 aa6.1□□□□□ -1.43
SF3B1-212ENST00000496458 PEX14O75381 377 aa6.1□□□□□ -1.43
SF3B1-212ENST00000496458 LCATP04180 440 aa6.1□□□□□ -1.43
SF3B1-212ENST00000496458 TK1P04183 234 aa6.1□□□□□ -1.43
SF3B1-212ENST00000496458 AVPR1AP37288 418 aa6.1□□□□□ -1.43
SF3B1-212ENST00000496458 MLH1P40692 756 aa6.1□□□□□ -1.43
SF3B1-212ENST00000496458 GRK6P43250 576 aa6.1□□□□□ -1.43
SF3B1-212ENST00000496458 RFX5P48382 616 aaPredicted RBP6.1□□□□□ -1.43
SF3B1-212ENST00000496458 PPP3CCP48454 512 aa6.1□□□□□ -1.43
SF3B1-212ENST00000496458 MVDP53602 400 aa6.1□□□□□ -1.43
SF3B1-212ENST00000496458 TAF5Q15542 800 aa6.1□□□□□ -1.43
SF3B1-212ENST00000496458 DUSP6Q16828 381 aa6.1□□□□□ -1.43
SF3B1-212ENST00000496458 AP5B1Q2VPB7 878 aa6.1□□□□□ -1.43
SF3B1-212ENST00000496458 UBAP2Q5T6F2 1119 aaKnown RBP6.1□□□□□ -1.43
SF3B1-212ENST00000496458 TMEM268Q5VZI3 342 aa6.1□□□□□ -1.43
SF3B1-212ENST00000496458 ANO1Q5XXA6 986 aa6.1□□□□□ -1.43
SF3B1-212ENST00000496458 MOGAT3Q86VF5 341 aa6.1□□□□□ -1.43
SF3B1-212ENST00000496458 BICD2Q8TD16 824 aa6.1□□□□□ -1.43
SF3B1-212ENST00000496458 HDAC7Q8WUI4 952 aa6.1□□□□□ -1.43
SF3B1-212ENST00000496458 SDCCAG3Q96C92 435 aa6.1□□□□□ -1.43
SF3B1-212ENST00000496458 NTPCRQ9BSD7 190 aaKnown RBP6.1□□□□□ -1.43
SF3B1-212ENST00000496458 DCLK3Q9C098 648 aa6.1□□□□□ -1.43
SF3B1-212ENST00000496458 KLHL31Q9H511 634 aa6.1□□□□□ -1.43
SF3B1-212ENST00000496458 TLR8Q9NR97 1041 aaKnown RBP6.1□□□□□ -1.43
SF3B1-212ENST00000496458 FZD10Q9ULW2 581 aa6.1□□□□□ -1.43
SF3B1-212ENST00000496458 DHDHQ9UQ10 334 aa6.1□□□□□ -1.43
SF3B1-212ENST00000496458 B9A039 149 aa6.09□□□□□ -1.43
SF3B1-212ENST00000496458 STX16-NPEPL1H3BU86 382 aa6.09□□□□□ -1.43
SF3B1-212ENST00000496458 STX16O14662 325 aa6.09□□□□□ -1.43
SF3B1-212ENST00000496458 SPRY3O43610 288 aa6.09□□□□□ -1.43
SF3B1-212ENST00000496458 TCEA3O75764 348 aa6.09□□□□□ -1.43
SF3B1-212ENST00000496458 CBX6O95503 412 aa6.09□□□□□ -1.43
SF3B1-212ENST00000496458 METTL18O95568 372 aa6.09□□□□□ -1.43
SF3B1-212ENST00000496458 RXRAP19793 462 aa6.09□□□□□ -1.43
SF3B1-212ENST00000496458 SKIV2L2P42285 1042 aaKnown RBP6.09□□□□□ -1.43
SF3B1-212ENST00000496458 ZP1P60852 638 aa6.09□□□□□ -1.43
SF3B1-212ENST00000496458 ACTR2P61160 394 aa6.09□□□□□ -1.43
SF3B1-212ENST00000496458 ARHGAP8P85298 464 aa6.09□□□□□ -1.43
SF3B1-212ENST00000496458 GPS2Q13227 327 aa6.09□□□□□ -1.43
SF3B1-212ENST00000496458 BYSLQ13895 437 aaKnown RBP6.09□□□□□ -1.43
SF3B1-212ENST00000496458 OTUD1Q5VV17 481 aaPredicted RBP6.09□□□□□ -1.43
SF3B1-212ENST00000496458 HEPHL1Q6MZM0 1159 aa6.09□□□□□ -1.43
SF3B1-212ENST00000496458 TRILQ7L0X0 811 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms