RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 C2orf49Q9BVC5 232 aaPredicted RBP14.63□□□□□ -0.07
VTI1A-209ENST00000496445 TMEM51Q9NW97 253 aa14.63□□□□□ -0.07
VTI1A-209ENST00000496445 NEU3Q9UQ49 428 aa14.63□□□□□ -0.07
VTI1A-209ENST00000496445 MSRB2Q9Y3D2 182 aa14.63□□□□□ -0.07
VTI1A-209ENST00000496445 PKD1L2Q7Z442 2459 aa14.63□□□□□ -0.07
VTI1A-209ENST00000496445 FAM221BA6H8Z2 402 aa14.62□□□□□ -0.07
VTI1A-209ENST00000496445 C2CD4BA6NLJ0 364 aa14.62□□□□□ -0.07
VTI1A-209ENST00000496445 SLC7A4O43246 635 aa14.62□□□□□ -0.07
VTI1A-209ENST00000496445 SRGAP2O75044 1071 aa14.62□□□□□ -0.07
VTI1A-209ENST00000496445 GSCP56915 257 aaPredicted RBP14.62□□□□□ -0.07
VTI1A-209ENST00000496445 KRT83P78385 493 aa14.62□□□□□ -0.07
VTI1A-209ENST00000496445 IL9RQ01113 521 aa14.62□□□□□ -0.07
VTI1A-209ENST00000496445 CDO1Q16878 200 aa14.62□□□□□ -0.07
VTI1A-209ENST00000496445 CLEC16AQ2KHT3 1053 aa14.62□□□□□ -0.07
VTI1A-209ENST00000496445 C6orf118Q5T5N4 469 aa14.62□□□□□ -0.07
VTI1A-209ENST00000496445 CCDC183Q5T5S1 534 aa14.62□□□□□ -0.07
VTI1A-209ENST00000496445 ACBD5Q5T8D3 534 aaPredicted RBP14.62□□□□□ -0.07
VTI1A-209ENST00000496445 PIP5KL1Q5T9C9 394 aa14.62□□□□□ -0.07
VTI1A-209ENST00000496445 MANEALQ5VSG8 457 aa14.62□□□□□ -0.07
VTI1A-209ENST00000496445 LRSAM1Q6UWE0 723 aa14.62□□□□□ -0.07
VTI1A-209ENST00000496445 DSG4Q86SJ6 1040 aa14.62□□□□□ -0.07
VTI1A-209ENST00000496445 SLCO6A1Q86UG4 719 aa14.62□□□□□ -0.07
VTI1A-209ENST00000496445 KDF1Q8NAX2 398 aaPredicted RBP14.62□□□□□ -0.07
VTI1A-209ENST00000496445 ATP11CQ8NB49 1132 aa14.62□□□□□ -0.07
VTI1A-209ENST00000496445 NEK11Q8NG66 645 aa14.62□□□□□ -0.07
VTI1A-209ENST00000496445 OR2A12Q8NGT7 310 aa14.62□□□□□ -0.07
VTI1A-209ENST00000496445 RXFP2Q8WXD0 754 aa14.62□□□□□ -0.07
VTI1A-209ENST00000496445 ADAMTS14Q8WXS8 1223 aa14.62□□□□□ -0.07
VTI1A-209ENST00000496445 ERGIC2Q96RQ1 377 aa14.62□□□□□ -0.07
VTI1A-209ENST00000496445 ACE2Q9BYF1 805 aaPredicted RBP14.62□□□□□ -0.07
VTI1A-209ENST00000496445 ZYG11BQ9C0D3 744 aa14.62□□□□□ -0.07
VTI1A-209ENST00000496445 ARHGAP20Q9P2F6 1191 aa14.62□□□□□ -0.07
VTI1A-209ENST00000496445 ANKRD11Q6UB99 2663 aaPredicted RBP14.62□□□□□ -0.07
VTI1A-209ENST00000496445 NBEAQ8NFP9 2946 aa14.61□□□□□ -0.07
VTI1A-209ENST00000496445 TBC1D3DA0A087WVF3 549 aa14.61□□□□□ -0.07
VTI1A-209ENST00000496445 TBC1D3IA0A087WXS9 549 aa14.61□□□□□ -0.07
VTI1A-209ENST00000496445 TBC1D3EA0A087X179 549 aa14.61□□□□□ -0.07
VTI1A-209ENST00000496445 TBC1D3KA0A087X1G2 549 aa14.61□□□□□ -0.07
VTI1A-209ENST00000496445 A0A1B0GTQ1 180 aa14.61□□□□□ -0.07
VTI1A-209ENST00000496445 ILVBLA1L0T0 632 aa14.61□□□□□ -0.07
VTI1A-209ENST00000496445 TBC1D3FA6NER0 549 aaPredicted RBP14.61□□□□□ -0.07
VTI1A-209ENST00000496445 LRRC10BA6NIK2 292 aa14.61□□□□□ -0.07
VTI1A-209ENST00000496445 TBC1D3LB9A6J9 549 aa14.61□□□□□ -0.07
VTI1A-209ENST00000496445 C1QTNF3-AMACRE9PGA6 284 aa14.61□□□□□ -0.07
VTI1A-209ENST00000496445 BNIP3LO60238 219 aa14.61□□□□□ -0.07
VTI1A-209ENST00000496445 PCDHGA12O60330 932 aa14.61□□□□□ -0.07
VTI1A-209ENST00000496445 ZNF821O75541 412 aaPredicted RBP14.61□□□□□ -0.07
VTI1A-209ENST00000496445 ZMPSTE24O75844 475 aa14.61□□□□□ -0.07
VTI1A-209ENST00000496445 DKK1O94907 266 aa14.61□□□□□ -0.07
VTI1A-209ENST00000496445 TBC1D3HP0C7X1 549 aa14.61□□□□□ -0.07
VTI1A-209ENST00000496445 ATP1A3P13637 1013 aa14.61□□□□□ -0.07
VTI1A-209ENST00000496445 CD38P28907 300 aa14.61□□□□□ -0.07
VTI1A-209ENST00000496445 OR1E1P30953 314 aa14.61□□□□□ -0.07
VTI1A-209ENST00000496445 SDC4P31431 198 aa14.61□□□□□ -0.07
VTI1A-209ENST00000496445 PTPN9P43378 593 aa14.61□□□□□ -0.07
VTI1A-209ENST00000496445 C21orf59P57076 290 aa14.61□□□□□ -0.07
VTI1A-209ENST00000496445 TAS2R38P59533 333 aa14.61□□□□□ -0.07
VTI1A-209ENST00000496445 UBXN1Q04323 297 aa14.61□□□□□ -0.07
VTI1A-209ENST00000496445 SHBQ15464 509 aa14.61□□□□□ -0.07
VTI1A-209ENST00000496445 FAM46CQ5VWP2 391 aa14.61□□□□□ -0.07
VTI1A-209ENST00000496445 TBC1D3GQ6DHY5 549 aa14.61□□□□□ -0.07
VTI1A-209ENST00000496445 TBC1D3CQ6IPX1 549 aa14.61□□□□□ -0.07
VTI1A-209ENST00000496445 C22orf39Q6P5X5 142 aa14.61□□□□□ -0.07
VTI1A-209ENST00000496445 TRIM72Q6ZMU5 477 aa14.61□□□□□ -0.07
VTI1A-209ENST00000496445 TRIM69Q86WT6 500 aa14.61□□□□□ -0.07
VTI1A-209ENST00000496445 TBC1D3Q8IZP1 549 aaPredicted RBP14.61□□□□□ -0.07
VTI1A-209ENST00000496445 AOPEPQ8N6M6 819 aa14.61□□□□□ -0.07
VTI1A-209ENST00000496445 CCDC185Q8N715 623 aa14.61□□□□□ -0.07
VTI1A-209ENST00000496445 CHST14Q8NCH0 376 aa14.61□□□□□ -0.07
VTI1A-209ENST00000496445 RHBDD1Q8TEB9 315 aa14.61□□□□□ -0.07
VTI1A-209ENST00000496445 CENPIQ92674 756 aaPredicted RBP14.61□□□□□ -0.07
VTI1A-209ENST00000496445 ARRDC3Q96B67 414 aa14.61□□□□□ -0.07
VTI1A-209ENST00000496445 SERAC1Q96JX3 654 aa14.61□□□□□ -0.07
VTI1A-209ENST00000496445 MAGEB5Q9BZ81 275 aa14.61□□□□□ -0.07
VTI1A-209ENST00000496445 AASDHPPTQ9NRN7 309 aa14.61□□□□□ -0.07
VTI1A-209ENST00000496445 NDFIP2Q9NV92 336 aa14.61□□□□□ -0.07
VTI1A-209ENST00000496445 TMEM63CQ9P1W3 806 aa14.61□□□□□ -0.07
VTI1A-209ENST00000496445 PPARGC1AQ9UBK2 798 aaKnown RBP14.61□□□□□ -0.07
VTI1A-209ENST00000496445 ZMIZ1Q9ULJ6 1067 aa14.61□□□□□ -0.07
VTI1A-209ENST00000496445 SMG1Q96Q15 3661 aaKnown RBP14.6□□□□□ -0.07
VTI1A-209ENST00000496445 FAM72CH0Y354 149 aa14.6□□□□□ -0.07
VTI1A-209ENST00000496445 GOLGA6L22H0YM25 854 aa14.6□□□□□ -0.07
VTI1A-209ENST00000496445 MBD3O95983 291 aa14.6□□□□□ -0.07
VTI1A-209ENST00000496445 ATXN1LP0C7T5 689 aaKnown RBP14.6□□□□□ -0.07
VTI1A-209ENST00000496445 MAT2AP31153 395 aaKnown RBP14.6□□□□□ -0.07
VTI1A-209ENST00000496445 NSFP46459 744 aaKnown RBP14.6□□□□□ -0.07
VTI1A-209ENST00000496445 SERPINH1P50454 418 aaKnown RBP14.6□□□□□ -0.07
VTI1A-209ENST00000496445 CLCN6P51797 869 aa14.6□□□□□ -0.07
VTI1A-209ENST00000496445 HDAC4P56524 1084 aa14.6□□□□□ -0.07
VTI1A-209ENST00000496445 ARF5P84085 180 aa14.6□□□□□ -0.07
VTI1A-209ENST00000496445 NRG1Q02297 640 aaPredicted RBP14.6□□□□□ -0.07
VTI1A-209ENST00000496445 TYRO3Q06418 890 aa14.6□□□□□ -0.07
VTI1A-209ENST00000496445 SUZ12Q15022 739 aaKnown RBP14.6□□□□□ -0.07
VTI1A-209ENST00000496445 PRAMEF14Q5SWL7 426 aa14.6□□□□□ -0.07
VTI1A-209ENST00000496445 FAM72AQ5TYM5 149 aa14.6□□□□□ -0.07
VTI1A-209ENST00000496445 NAPEPLDQ6IQ20 393 aa14.6□□□□□ -0.07
VTI1A-209ENST00000496445 FAM72DQ6L9T8 149 aa14.6□□□□□ -0.07
VTI1A-209ENST00000496445 ZNF783Q6ZMS7 281 aa14.6□□□□□ -0.07
VTI1A-209ENST00000496445 MON1BQ7L1V2 547 aa14.6□□□□□ -0.07
VTI1A-209ENST00000496445 STRADAQ7RTN6 431 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms