RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 FCF1Q9Y324 198 aaKnown RBP19.85■□□□□ 0.77
HDAC4-212ENST00000495497 DMDP11532 3685 aa19.85■□□□□ 0.77
HDAC4-212ENST00000495497 J3KR12 359 aa19.84■□□□□ 0.77
HDAC4-212ENST00000495497 HRO43593 1189 aa19.84■□□□□ 0.77
HDAC4-212ENST00000495497 NRDCO43847 1150 aa19.84■□□□□ 0.77
HDAC4-212ENST00000495497 BNIP3LO60238 219 aa19.84■□□□□ 0.77
HDAC4-212ENST00000495497 PALMO75781 387 aa19.84■□□□□ 0.77
HDAC4-212ENST00000495497 VASPP50552 380 aaPredicted RBP19.84■□□□□ 0.77
HDAC4-212ENST00000495497 KIAA1324Q6UXG2 1013 aaKnown RBP19.84■□□□□ 0.77
HDAC4-212ENST00000495497 Q6ZVU0 165 aa19.84■□□□□ 0.77
HDAC4-212ENST00000495497 STK40Q8N2I9 435 aa19.84■□□□□ 0.77
HDAC4-212ENST00000495497 PQLC3Q8N755 202 aa19.84■□□□□ 0.77
HDAC4-212ENST00000495497 FRMD1Q8N878 549 aa19.84■□□□□ 0.77
HDAC4-212ENST00000495497 KIAA1524Q8TCG1 905 aa19.84■□□□□ 0.77
HDAC4-212ENST00000495497 FAF2Q96CS3 445 aa19.84■□□□□ 0.77
HDAC4-212ENST00000495497 CALR3Q96L12 384 aaKnown RBP19.84■□□□□ 0.77
HDAC4-212ENST00000495497 PHOX2BQ99453 314 aa19.84■□□□□ 0.77
HDAC4-212ENST00000495497 TNKS2Q9H2K2 1166 aa19.84■□□□□ 0.77
HDAC4-212ENST00000495497 PRDM16Q9HAZ2 1276 aa19.84■□□□□ 0.77
HDAC4-212ENST00000495497 DDX56Q9NY93 547 aaKnown RBP19.84■□□□□ 0.77
HDAC4-212ENST00000495497 DONSONQ9NYP3 566 aa19.84■□□□□ 0.77
HDAC4-212ENST00000495497 HPCAL4Q9UM19 191 aa19.84■□□□□ 0.77
HDAC4-212ENST00000495497 PCDHGA2Q9Y5H1 932 aa19.84■□□□□ 0.77
HDAC4-212ENST00000495497 CCDC163A0A0D9SF12 145 aa19.83■□□□□ 0.77
HDAC4-212ENST00000495497 TARSL2A2RTX5 802 aaKnown RBP19.83■□□□□ 0.77
HDAC4-212ENST00000495497 ARHGAP42A6NI28 874 aa19.83■□□□□ 0.77
HDAC4-212ENST00000495497 ZBTB24O43167 697 aaPredicted RBP19.83■□□□□ 0.77
HDAC4-212ENST00000495497 PSTPIP1O43586 416 aa19.83■□□□□ 0.77
HDAC4-212ENST00000495497 LILRB5O75023 590 aa19.83■□□□□ 0.77
HDAC4-212ENST00000495497 ZNF821O75541 412 aaPredicted RBP19.83■□□□□ 0.77
HDAC4-212ENST00000495497 CCDC175P0C221 793 aa19.83■□□□□ 0.77
HDAC4-212ENST00000495497 SERPINH1P50454 418 aaKnown RBP19.83■□□□□ 0.77
HDAC4-212ENST00000495497 LLGL1Q15334 1064 aa19.83■□□□□ 0.77
HDAC4-212ENST00000495497 NCBP2-AS2Q69YL0 99 aa19.83■□□□□ 0.77
HDAC4-212ENST00000495497 MFSD7Q6UXD7 560 aa19.83■□□□□ 0.77
HDAC4-212ENST00000495497 SIPA1Q96FS4 1042 aa19.83■□□□□ 0.77
HDAC4-212ENST00000495497 FAM129BQ96TA1 746 aa19.83■□□□□ 0.77
HDAC4-212ENST00000495497 IRF2BPLQ9H1B7 796 aa19.83■□□□□ 0.77
HDAC4-212ENST00000495497 LZTFL1Q9NQ48 299 aa19.83■□□□□ 0.77
HDAC4-212ENST00000495497 CAPN6Q9Y6Q1 641 aa19.83■□□□□ 0.77
HDAC4-212ENST00000495497 MAP3K6O95382 1288 aa19.82■□□□□ 0.76
HDAC4-212ENST00000495497 RPS14P62263 151 aaKnown RBP19.82■□□□□ 0.76
HDAC4-212ENST00000495497 NHLH1Q02575 133 aa19.82■□□□□ 0.76
HDAC4-212ENST00000495497 SLC20A2Q08357 652 aa19.82■□□□□ 0.76
HDAC4-212ENST00000495497 IFI16Q16666 785 aaKnown RBP19.82■□□□□ 0.76
HDAC4-212ENST00000495497 ODF2Q5BJF6 829 aa19.82■□□□□ 0.76
HDAC4-212ENST00000495497 C22orf39Q6P5X5 142 aa19.82■□□□□ 0.76
HDAC4-212ENST00000495497 FAM160A2Q8N612 972 aaPredicted RBP19.82■□□□□ 0.76
HDAC4-212ENST00000495497 LZTR1Q8N653 840 aa19.82■□□□□ 0.76
HDAC4-212ENST00000495497 RNF157Q96PX1 679 aa19.82■□□□□ 0.76
HDAC4-212ENST00000495497 TSGA10Q9BZW7 698 aa19.82■□□□□ 0.76
HDAC4-212ENST00000495497 PACSIN2Q9UNF0 486 aaPredicted RBP19.82■□□□□ 0.76
HDAC4-212ENST00000495497 PPP2R2CQ9Y2T4 447 aa19.82■□□□□ 0.76
HDAC4-212ENST00000495497 KRT86O43790 486 aa19.81■□□□□ 0.76
HDAC4-212ENST00000495497 MFSD11O43934 449 aa19.81■□□□□ 0.76
HDAC4-212ENST00000495497 FTCDO95954 541 aa19.81■□□□□ 0.76
HDAC4-212ENST00000495497 DNA2P51530 1060 aa19.81■□□□□ 0.76
HDAC4-212ENST00000495497 CLCN6P51797 869 aa19.81■□□□□ 0.76
HDAC4-212ENST00000495497 NT5DC3Q86UY8 548 aa19.81■□□□□ 0.76
HDAC4-212ENST00000495497 RFX6Q8HWS3 928 aa19.81■□□□□ 0.76
HDAC4-212ENST00000495497 MMAAQ8IVH4 418 aaKnown RBP19.81■□□□□ 0.76
HDAC4-212ENST00000495497 KATNAL2Q8IYT4 538 aa19.81■□□□□ 0.76
HDAC4-212ENST00000495497 LRRN4Q8WUT4 740 aa19.81■□□□□ 0.76
HDAC4-212ENST00000495497 PRCCQ92733 491 aaPredicted RBP19.81■□□□□ 0.76
HDAC4-212ENST00000495497 RSPH9Q9H1X1 276 aaPredicted RBP19.81■□□□□ 0.76
HDAC4-212ENST00000495497 PDFQ9HBH1 243 aa19.81■□□□□ 0.76
HDAC4-212ENST00000495497 CYP8B1Q9UNU6 501 aa19.81■□□□□ 0.76
HDAC4-212ENST00000495497 PRAMEF11O60813 436 aa19.8■□□□□ 0.76
HDAC4-212ENST00000495497 RPP40O75818 363 aaKnown RBP19.8■□□□□ 0.76
HDAC4-212ENST00000495497 KRT10P13645 584 aa19.8■□□□□ 0.76
HDAC4-212ENST00000495497 BCKDHBP21953 392 aa19.8■□□□□ 0.76
HDAC4-212ENST00000495497 CTNNA1P35221 906 aaKnown RBP19.8■□□□□ 0.76
HDAC4-212ENST00000495497 SERPINB6P35237 376 aa19.8■□□□□ 0.76
HDAC4-212ENST00000495497 PSMD8P48556 350 aa19.8■□□□□ 0.76
HDAC4-212ENST00000495497 GBE1Q04446 702 aa19.8■□□□□ 0.76
HDAC4-212ENST00000495497 PAFAH1B3Q15102 231 aaKnown RBP19.8■□□□□ 0.76
HDAC4-212ENST00000495497 CYTH1Q15438 398 aa19.8■□□□□ 0.76
HDAC4-212ENST00000495497 MAP7D1Q3KQU3 841 aa19.8■□□□□ 0.76
HDAC4-212ENST00000495497 USP39Q53GS9 565 aaKnown RBP19.8■□□□□ 0.76
HDAC4-212ENST00000495497 ZNF776Q68DI1 518 aaPredicted RBP19.8■□□□□ 0.76
HDAC4-212ENST00000495497 ZC3H14Q6PJT7 736 aaKnown RBP19.8■□□□□ 0.76
HDAC4-212ENST00000495497 SPOCD1Q6ZMY3 1216 aa19.8■□□□□ 0.76
HDAC4-212ENST00000495497 RNF10Q8N5U6 811 aaKnown RBP19.8■□□□□ 0.76
HDAC4-212ENST00000495497 CHST14Q8NCH0 376 aa19.8■□□□□ 0.76
HDAC4-212ENST00000495497 OR2A12Q8NGT7 310 aa19.8■□□□□ 0.76
HDAC4-212ENST00000495497 GAB3Q8WWW8 586 aa19.8■□□□□ 0.76
HDAC4-212ENST00000495497 MAK16Q9BXY0 300 aaKnown RBP19.8■□□□□ 0.76
HDAC4-212ENST00000495497 TM6SF2Q9BZW4 377 aa19.8■□□□□ 0.76
HDAC4-212ENST00000495497 UBA2Q9UBT2 640 aaPredicted RBP19.8■□□□□ 0.76
HDAC4-212ENST00000495497 IPO11Q9UI26 975 aaKnown RBP19.8■□□□□ 0.76
HDAC4-212ENST00000495497 MBD1Q9UIS9 605 aaPredicted RBP19.8■□□□□ 0.76
HDAC4-212ENST00000495497 AMFRQ9UKV5 643 aa19.8■□□□□ 0.76
HDAC4-212ENST00000495497 PCDHA3Q9Y5H8 950 aa19.8■□□□□ 0.76
HDAC4-212ENST00000495497 MYO15AQ9UKN7 3530 aa19.79■□□□□ 0.76
HDAC4-212ENST00000495497 ZSCAN5CA6NGD5 496 aaPredicted RBP19.79■□□□□ 0.76
HDAC4-212ENST00000495497 RNF103O00237 685 aa19.79■□□□□ 0.76
HDAC4-212ENST00000495497 TMCC1O94876 653 aa19.79■□□□□ 0.76
HDAC4-212ENST00000495497 ACADMP11310 421 aa19.79■□□□□ 0.76
HDAC4-212ENST00000495497 CTNNA2P26232 953 aa19.79■□□□□ 0.76
HDAC4-212ENST00000495497 P2RY2P41231 377 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms