RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 ILKQ13418 452 aa23.81■■□□□ 1.4
COL27A1-208ENST00000494780 PIP5KL1Q5T9C9 394 aa23.81■■□□□ 1.4
COL27A1-208ENST00000494780 NEK5Q6P3R8 708 aa23.81■■□□□ 1.4
COL27A1-208ENST00000494780 LRRC31Q6UY01 552 aa23.81■■□□□ 1.4
COL27A1-208ENST00000494780 TMIEQ8NEW7 156 aa23.81■■□□□ 1.4
COL27A1-208ENST00000494780 NXPE2Q96DL1 559 aa23.81■■□□□ 1.4
COL27A1-208ENST00000494780 C18orf8Q96DM3 657 aa23.81■■□□□ 1.4
COL27A1-208ENST00000494780 C1orf74Q96LT6 269 aa23.81■■□□□ 1.4
COL27A1-208ENST00000494780 NDST4Q9H3R1 872 aa23.81■■□□□ 1.4
COL27A1-208ENST00000494780 VPS51Q9UID3 782 aa23.81■■□□□ 1.4
COL27A1-208ENST00000494780 BAHCC1Q9P281 2608 aa23.81■■□□□ 1.4
COL27A1-208ENST00000494780 KNTC1P50748 2209 aa23.8■■□□□ 1.4
COL27A1-208ENST00000494780 A0A087WV48 116 aa23.8■■□□□ 1.4
COL27A1-208ENST00000494780 I6L893 689 aaPredicted RBP23.8■■□□□ 1.4
COL27A1-208ENST00000494780 SNAP91O60641 907 aa23.8■■□□□ 1.4
COL27A1-208ENST00000494780 CTSLP07711 333 aa23.8■■□□□ 1.4
COL27A1-208ENST00000494780 CHRNA3P32297 505 aa23.8■■□□□ 1.4
COL27A1-208ENST00000494780 CLCN6P51797 869 aa23.8■■□□□ 1.4
COL27A1-208ENST00000494780 SLC25A52Q3SY17 297 aa23.8■■□□□ 1.4
COL27A1-208ENST00000494780 VWA3BQ502W6 1294 aa23.8■■□□□ 1.4
COL27A1-208ENST00000494780 C6orf118Q5T5N4 469 aa23.8■■□□□ 1.4
COL27A1-208ENST00000494780 DPY19L2P1Q6NXN4 242 aa23.8■■□□□ 1.4
COL27A1-208ENST00000494780 DCAF4L2Q8NA75 395 aa23.8■■□□□ 1.4
COL27A1-208ENST00000494780 OR2A12Q8NGT7 310 aa23.8■■□□□ 1.4
COL27A1-208ENST00000494780 KLHDC7BQ96G42 594 aa23.8■■□□□ 1.4
COL27A1-208ENST00000494780 PRNPP04156 253 aa23.79■■□□□ 1.4
COL27A1-208ENST00000494780 CKMT2P17540 419 aa23.79■■□□□ 1.4
COL27A1-208ENST00000494780 DRAP1Q14919 205 aaPredicted RBP23.79■■□□□ 1.4
COL27A1-208ENST00000494780 FBXL19Q6PCT2 694 aa23.79■■□□□ 1.4
COL27A1-208ENST00000494780 TMEM145Q8NBT3 493 aa23.79■■□□□ 1.4
COL27A1-208ENST00000494780 TBCBQ99426 244 aa23.79■■□□□ 1.4
COL27A1-208ENST00000494780 IGLV3-10A0A075B6K4 115 aa23.78■■□□□ 1.4
COL27A1-208ENST00000494780 K7ERQ8 282 aa23.78■■□□□ 1.4
COL27A1-208ENST00000494780 KPNA3O00505 521 aaPredicted RBP23.78■■□□□ 1.4
COL27A1-208ENST00000494780 PRKCSHP14314 528 aaPredicted RBP23.78■■□□□ 1.4
COL27A1-208ENST00000494780 CYP11B1P15538 503 aa23.78■■□□□ 1.4
COL27A1-208ENST00000494780 RRM1P23921 792 aa23.78■■□□□ 1.4
COL27A1-208ENST00000494780 RAPGEF1Q13905 1077 aa23.78■■□□□ 1.4
COL27A1-208ENST00000494780 ACAP1Q15027 740 aa23.78■■□□□ 1.4
COL27A1-208ENST00000494780 MIIPQ5JXC2 388 aa23.78■■□□□ 1.4
COL27A1-208ENST00000494780 FAM102AQ5T9C2 384 aaPredicted RBP23.78■■□□□ 1.4
COL27A1-208ENST00000494780 HES3Q5TGS1 186 aa23.78■■□□□ 1.4
COL27A1-208ENST00000494780 HORMAD1Q86X24 394 aa23.78■■□□□ 1.4
COL27A1-208ENST00000494780 ERICH1Q86X53 443 aa23.78■■□□□ 1.4
COL27A1-208ENST00000494780 XYLT1Q86Y38 959 aa23.78■■□□□ 1.4
COL27A1-208ENST00000494780 ARRDC3Q96B67 414 aa23.78■■□□□ 1.4
COL27A1-208ENST00000494780 LRIG1Q96JA1 1093 aa23.78■■□□□ 1.4
COL27A1-208ENST00000494780 TUBGCP2Q9BSJ2 902 aa23.78■■□□□ 1.4
COL27A1-208ENST00000494780 DYRK4Q9NR20 520 aa23.78■■□□□ 1.4
COL27A1-208ENST00000494780 MPP6Q9NZW5 540 aa23.78■■□□□ 1.4
COL27A1-208ENST00000494780 CA5BQ9Y2D0 317 aa23.78■■□□□ 1.4
COL27A1-208ENST00000494780 SNX10Q9Y5X0 201 aa23.78■■□□□ 1.4
COL27A1-208ENST00000494780 A0A0D9SEW6 157 aa23.77■■□□□ 1.4
COL27A1-208ENST00000494780 A0A1W2PQU0 124 aa23.77■■□□□ 1.4
COL27A1-208ENST00000494780 SLC31A1O15431 190 aa23.77■■□□□ 1.4
COL27A1-208ENST00000494780 SMAD6O43541 496 aaKnown RBP23.77■■□□□ 1.4
COL27A1-208ENST00000494780 CLDN6P56747 220 aa23.77■■□□□ 1.4
COL27A1-208ENST00000494780 SOWAHCQ53LP3 525 aaPredicted RBP23.77■■□□□ 1.4
COL27A1-208ENST00000494780 NBEAQ8NFP9 2946 aa23.77■■□□□ 1.4
COL27A1-208ENST00000494780 SDC3O75056 442 aa23.76■■□□□ 1.39
COL27A1-208ENST00000494780 LSM8O95777 96 aaKnown RBP23.76■■□□□ 1.39
COL27A1-208ENST00000494780 THEGLP0DJG4 465 aa23.76■■□□□ 1.39
COL27A1-208ENST00000494780 ACP1P24666 158 aa23.76■■□□□ 1.39
COL27A1-208ENST00000494780 ERCC5P28715 1186 aaPredicted RBP23.76■■□□□ 1.39
COL27A1-208ENST00000494780 OR1E1P30953 314 aa23.76■■□□□ 1.39
COL27A1-208ENST00000494780 RECQLP46063 649 aaPredicted RBP23.76■■□□□ 1.39
COL27A1-208ENST00000494780 KCNMA1Q12791 1236 aa23.76■■□□□ 1.39
COL27A1-208ENST00000494780 TARDBPQ13148 414 aaKnown RBP eCLIP23.76■■□□□ 1.39
COL27A1-208ENST00000494780 ZNF284Q2VY69 593 aa23.76■■□□□ 1.39
COL27A1-208ENST00000494780 PROX2Q3B8N5 592 aa23.76■■□□□ 1.39
COL27A1-208ENST00000494780 KLHDC7AQ5VTJ3 777 aa23.76■■□□□ 1.39
COL27A1-208ENST00000494780 C22orf39Q6P5X5 142 aa23.76■■□□□ 1.39
COL27A1-208ENST00000494780 LINGO4Q6UY18 593 aa23.76■■□□□ 1.39
COL27A1-208ENST00000494780 ZNF783Q6ZMS7 281 aa23.76■■□□□ 1.39
COL27A1-208ENST00000494780 ERN2Q76MJ5 926 aaKnown RBP23.76■■□□□ 1.39
COL27A1-208ENST00000494780 TFAP2DQ7Z6R9 452 aa23.76■■□□□ 1.39
COL27A1-208ENST00000494780 CACTIN-AS1Q8N1I8 211 aa23.76■■□□□ 1.39
COL27A1-208ENST00000494780 CHST14Q8NCH0 376 aa23.76■■□□□ 1.39
COL27A1-208ENST00000494780 MSANTD4Q8NCY6 345 aa23.76■■□□□ 1.39
COL27A1-208ENST00000494780 HAPLN3Q96S86 360 aa23.76■■□□□ 1.39
COL27A1-208ENST00000494780 HDAC8Q9BY41 377 aa23.76■■□□□ 1.39
COL27A1-208ENST00000494780 NRSN2Q9GZP1 204 aa23.76■■□□□ 1.39
COL27A1-208ENST00000494780 TMPRSS4Q9NRS4 437 aa23.76■■□□□ 1.39
COL27A1-208ENST00000494780 KLHL11Q9NVR0 708 aa23.76■■□□□ 1.39
COL27A1-208ENST00000494780 IL36AQ9UHA7 158 aa23.76■■□□□ 1.39
COL27A1-208ENST00000494780 FHOD1Q9Y613 1164 aa23.76■■□□□ 1.39
COL27A1-208ENST00000494780 ARID1BQ8NFD5 2236 aaPredicted RBP23.76■■□□□ 1.39
COL27A1-208ENST00000494780 DOCK9Q9BZ29 2069 aa23.75■■□□□ 1.39
COL27A1-208ENST00000494780 ILVBLA1L0T0 632 aa23.75■■□□□ 1.39
COL27A1-208ENST00000494780 PRLRP16471 622 aa23.75■■□□□ 1.39
COL27A1-208ENST00000494780 AKT2P31751 481 aa23.75■■□□□ 1.39
COL27A1-208ENST00000494780 FLT3P36888 993 aa23.75■■□□□ 1.39
COL27A1-208ENST00000494780 ZNF211Q13398 564 aaPredicted RBP23.75■■□□□ 1.39
COL27A1-208ENST00000494780 BNIPLQ7Z465 357 aa23.75■■□□□ 1.39
COL27A1-208ENST00000494780 RFFLQ8WZ73 363 aa23.75■■□□□ 1.39
COL27A1-208ENST00000494780 KLK6Q92876 244 aa23.75■■□□□ 1.39
COL27A1-208ENST00000494780 PPP1R16AQ96I34 528 aa23.75■■□□□ 1.39
COL27A1-208ENST00000494780 NAA15Q9BXJ9 866 aaKnown RBP23.75■■□□□ 1.39
COL27A1-208ENST00000494780 CEP44Q9C0F1 390 aa23.75■■□□□ 1.39
COL27A1-208ENST00000494780 IGSF10Q6WRI0 2623 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms